RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 PPP2R2CQ9Y2T4 447 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 COQ6Q9Y2Z9 468 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 PCDHB9Q9Y5E1 797 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 SNX11Q9Y5W9 270 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 CFAP54Q96N23 3096 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 PCDH15Q96QU1 1955 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 MIF4GDA9UHW6 222 aaKnown RBP13.1□□□□□ -0.31
CNOT1-213ENST00000568158 PRAMEF26H0Y7S4 382 aa13.1□□□□□ -0.31
CNOT1-213ENST00000568158 PPP1R12AO14974 1030 aaPredicted RBP13.1□□□□□ -0.31
CNOT1-213ENST00000568158 VILLO15195 856 aa13.1□□□□□ -0.31
CNOT1-213ENST00000568158 RAD51BO15315 384 aa13.1□□□□□ -0.31
CNOT1-213ENST00000568158 PTMAP06454 111 aaKnown RBP13.1□□□□□ -0.31
CNOT1-213ENST00000568158 PDHA1P08559 390 aa13.1□□□□□ -0.31
CNOT1-213ENST00000568158 CETN2P41208 172 aa13.1□□□□□ -0.31
CNOT1-213ENST00000568158 GRIA4P48058 902 aa13.1□□□□□ -0.31
CNOT1-213ENST00000568158 ATXN3P54252 364 aaPredicted RBP13.1□□□□□ -0.31
CNOT1-213ENST00000568158 CLDN2P57739 230 aa13.1□□□□□ -0.31
CNOT1-213ENST00000568158 POLR2LP62875 67 aaKnown RBP13.1□□□□□ -0.31
CNOT1-213ENST00000568158 IFI35P80217 286 aaPredicted RBP13.1□□□□□ -0.31
CNOT1-213ENST00000568158 SGCGQ13326 291 aa13.1□□□□□ -0.31
CNOT1-213ENST00000568158 HLA-BQ31612 363 aa13.1□□□□□ -0.31
CNOT1-213ENST00000568158 CCDC181Q5TID7 509 aa13.1□□□□□ -0.31
CNOT1-213ENST00000568158 NAPEPLDQ6IQ20 393 aa13.1□□□□□ -0.31
CNOT1-213ENST00000568158 KIAA1161Q6NSJ0 714 aa13.1□□□□□ -0.31
CNOT1-213ENST00000568158 MINDY1Q8N5J2 469 aa13.1□□□□□ -0.31
CNOT1-213ENST00000568158 NETO1Q8TDF5 533 aa13.1□□□□□ -0.31
CNOT1-213ENST00000568158 CXorf40AQ8TE69 158 aa13.1□□□□□ -0.31
CNOT1-213ENST00000568158 TFB1MQ8WVM0 346 aaKnown RBP13.1□□□□□ -0.31
CNOT1-213ENST00000568158 ANP32BQ92688 251 aaKnown RBP13.1□□□□□ -0.31
CNOT1-213ENST00000568158 PDLIM2Q96JY6 352 aa13.1□□□□□ -0.31
CNOT1-213ENST00000568158 BMFQ96LC9 184 aa13.1□□□□□ -0.31
CNOT1-213ENST00000568158 AGAP3Q96P47 875 aa13.1□□□□□ -0.31
CNOT1-213ENST00000568158 SMIM14Q96QK8 99 aa13.1□□□□□ -0.31
CNOT1-213ENST00000568158 FAM118BQ9BPY3 351 aa13.1□□□□□ -0.31
CNOT1-213ENST00000568158 BRD8Q9H0E9 1235 aa13.1□□□□□ -0.31
CNOT1-213ENST00000568158 AMACRQ9UHK6 382 aa13.1□□□□□ -0.31
CNOT1-213ENST00000568158 TPX2Q9ULW0 747 aaKnown RBP13.1□□□□□ -0.31
CNOT1-213ENST00000568158 EFR3BQ9Y2G0 817 aa13.1□□□□□ -0.31
CNOT1-213ENST00000568158 RAI2Q9Y5P3 530 aa13.1□□□□□ -0.31
CNOT1-213ENST00000568158 LRRK1Q38SD2 2015 aa13.1□□□□□ -0.31
CNOT1-213ENST00000568158 DCDC2BA2VCK2 349 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 GOLGA8CPA6NN73 597 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 H0Y8X5 98 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 H7C0C1 242 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 TLR4O00206 839 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 SLC30A4O14863 429 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 TM4SF5O14894 197 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 MMP2P08253 660 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 CTPS1P17812 591 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 HNRNPA2B1P22626 353 aaKnown RBP13.09□□□□□ -0.31
CNOT1-213ENST00000568158 CES1P23141 567 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 PTPN7P35236 360 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 NUDT1P36639 197 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 ID4P47928 161 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 ATP5OP48047 213 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 LIG3P49916 1009 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 SUOXP51687 545 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 LIMK1P53667 647 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 C21orf59P57076 290 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 OTUD4Q01804 1114 aaKnown RBP13.09□□□□□ -0.31
CNOT1-213ENST00000568158 ELP6Q0PNE2 266 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 PRKD1Q15139 912 aaPredicted RBP13.09□□□□□ -0.31
CNOT1-213ENST00000568158 CACNA1EQ15878 2313 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 TEX44Q53QW1 395 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 RALGPS1Q5JS13 557 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 MEI1Q5TIA1 1274 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 ALG1LQ6GMV1 187 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 KDM7AQ6ZMT4 941 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 MFSD2AQ8NA29 543 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 ACTL9Q8TC94 416 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 PIH1D2Q8WWB5 315 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 TMEM131Q92545 1883 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 KLF6Q99612 283 aaPredicted RBP13.09□□□□□ -0.31
CNOT1-213ENST00000568158 GAREM1Q9H706 876 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 DLL3Q9NYJ7 618 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 CDV3Q9UKY7 258 aaKnown RBP13.09□□□□□ -0.31
CNOT1-213ENST00000568158 CHKBQ9Y259 395 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 HS3ST3A1Q9Y663 406 aa13.09□□□□□ -0.31
CNOT1-213ENST00000568158 ASCC3Q8N3C0 2202 aaKnown RBP13.08□□□□□ -0.32
CNOT1-213ENST00000568158 A0A0U1RQS6 177 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 TCRBV7S2A1N4TA0A589 114 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 POM121BA6NF01 834 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 APOC4-APOC2K7ER74 178 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 FZD6O60353 706 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 SOCS5O75159 536 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 TM7SF2O76062 418 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 TJP3O95049 919 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 PGLSO95336 258 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 CPP00450 1065 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 PRLP01236 227 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 APOC2P02655 101 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 PTPN3P26045 913 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 RBL1P28749 1068 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 AKT2P31751 481 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 CD86P42081 329 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 CTSKP43235 329 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 SKOR1P84550 965 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 WASHC5Q12768 1159 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 RALGDSQ12967 914 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 NOMO1Q15155 1222 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms