RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 BBIP1A8MTZ0 92 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 ACOX3O15254 700 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 PSMD3O43242 534 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 CCT8P50990 548 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 INPP5AQ14642 412 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 DCAF6Q58WW2 860 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 LCN8Q6JVE9 175 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 PKN3Q6P5Z2 889 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 ABRAXAS1Q6UWZ7 409 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 LAYNQ6UX15 382 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 XKR5Q6UX68 686 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 CUZD1Q86UP6 607 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 RIOX2Q8IUF8 465 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 CCDC126Q96EE4 140 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 CENPNQ96H22 339 aaPredicted RBP15.78■□□□□ 0.12
COMMD4-215ENST00000566843 POLR1BQ9H9Y6 1135 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 IGSF5Q9NSI5 407 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 TCAF1Q9Y4C2 921 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 PPP2R3BQ9Y5P8 575 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 SLC30A1Q9Y6M5 507 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 TSC2P49815 1807 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 FAM72CH0Y354 149 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 SULT1C4O75897 302 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 HSD17B1P14061 328 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 IL10P22301 178 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 FASP25445 335 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 OXCT1P55809 520 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 BTG3Q14201 252 aaPredicted RBP15.77■□□□□ 0.12
COMMD4-215ENST00000566843 TECRLQ5HYJ1 363 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 PCID2Q5JVF3 399 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 FAM72AQ5TYM5 149 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 GRAMD4Q6IC98 578 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 FAM72DQ6L9T8 149 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 NIPAL1Q6NVV3 410 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 FAM117BQ6P1L5 589 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 PRMT9Q6P2P2 845 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 GADL1Q6ZQY3 521 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 USP50Q70EL3 339 aaPredicted RBP15.77■□□□□ 0.12
COMMD4-215ENST00000566843 LARP4Q71RC2 724 aaKnown RBP eCLIP15.77■□□□□ 0.124e-6■■■■■ 28.7
COMMD4-215ENST00000566843 LINC00523Q86TU6 105 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 FAM72BQ86X60 149 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 FUNDC1Q8IVP5 155 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 ANKRD13AQ8IZ07 590 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 SIX6OS1Q8N1H7 587 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 SPATA6LQ8N4H0 392 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 PCYOX1LQ8NBM8 494 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 NDRG1Q92597 394 aaKnown RBP15.77■□□□□ 0.12
COMMD4-215ENST00000566843 DPF3Q92784 378 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 TEKT5Q96M29 485 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 SLC9A7Q96T83 725 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 HNRNPABQ99729 332 aaKnown RBP15.77■□□□□ 0.12
COMMD4-215ENST00000566843 NEURL2Q9BR09 285 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 SELENONQ9NZV5 590 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 B3GNT3Q9Y2A9 372 aa15.77■□□□□ 0.12
COMMD4-215ENST00000566843 M0QYT0 321 aa15.77■□□□□ 0.11
COMMD4-215ENST00000566843 NME4O00746 187 aa15.77■□□□□ 0.11
COMMD4-215ENST00000566843 CLOCKO15516 846 aa15.77■□□□□ 0.11
COMMD4-215ENST00000566843 ADRA1BP35368 520 aa15.77■□□□□ 0.11
COMMD4-215ENST00000566843 ARCN1P48444 511 aaKnown RBP15.77■□□□□ 0.11
COMMD4-215ENST00000566843 BMXP51813 675 aa15.77■□□□□ 0.11
COMMD4-215ENST00000566843 AIF1P55008 147 aa15.77■□□□□ 0.11
COMMD4-215ENST00000566843 TAS2R39P59534 338 aa15.77■□□□□ 0.11
COMMD4-215ENST00000566843 BNIP2Q12982 314 aa15.77■□□□□ 0.11
COMMD4-215ENST00000566843 ZBTB6Q15916 424 aa15.77■□□□□ 0.11
COMMD4-215ENST00000566843 MAP7D1Q3KQU3 841 aa15.77■□□□□ 0.11
COMMD4-215ENST00000566843 LBX2Q6XYB7 198 aa15.77■□□□□ 0.11
COMMD4-215ENST00000566843 KCTD8Q6ZWB6 473 aa15.77■□□□□ 0.11
COMMD4-215ENST00000566843 RETREG3Q86VR2 466 aa15.77■□□□□ 0.11
COMMD4-215ENST00000566843 DENND6AQ8IWF6 608 aa15.77■□□□□ 0.11
COMMD4-215ENST00000566843 TRUB1Q8WWH5 349 aaKnown RBP15.77■□□□□ 0.11
COMMD4-215ENST00000566843 WNT8BQ93098 351 aa15.77■□□□□ 0.11
COMMD4-215ENST00000566843 NTAN1Q96AB6 310 aa15.77■□□□□ 0.11
COMMD4-215ENST00000566843 MYRFLQ96LU7 910 aa15.77■□□□□ 0.11
COMMD4-215ENST00000566843 SLC2A13Q96QE2 648 aa15.77■□□□□ 0.11
COMMD4-215ENST00000566843 HOPXQ9BPY8 73 aaPredicted RBP15.77■□□□□ 0.11
COMMD4-215ENST00000566843 CXCL16Q9H2A7 254 aa15.77■□□□□ 0.11
COMMD4-215ENST00000566843 PLEKHA5Q9HAU0 1116 aa15.77■□□□□ 0.11
COMMD4-215ENST00000566843 FIS1Q9Y3D6 152 aa15.77■□□□□ 0.11
COMMD4-215ENST00000566843 RALGAPA2Q2PPJ7 1873 aa15.76■□□□□ 0.11
COMMD4-215ENST00000566843 NEMP2A6NFY4 417 aa15.76■□□□□ 0.11
COMMD4-215ENST00000566843 K7EPI3 171 aa15.76■□□□□ 0.11
COMMD4-215ENST00000566843 NRP1O14786 923 aa15.76■□□□□ 0.11
COMMD4-215ENST00000566843 CACNG3O60359 315 aa15.76■□□□□ 0.11
COMMD4-215ENST00000566843 TSPAN1O60635 241 aa15.76■□□□□ 0.11
COMMD4-215ENST00000566843 ESRRBO95718 433 aa15.76■□□□□ 0.11
COMMD4-215ENST00000566843 CPNE6O95741 557 aa15.76■□□□□ 0.11
COMMD4-215ENST00000566843 MYL3P08590 195 aa15.76■□□□□ 0.11
COMMD4-215ENST00000566843 GPX3P22352 226 aa15.76■□□□□ 0.11
COMMD4-215ENST00000566843 CAPGP40121 348 aa15.76■□□□□ 0.11
COMMD4-215ENST00000566843 SCAPQ12770 1279 aa15.76■□□□□ 0.11
COMMD4-215ENST00000566843 PITRM1Q5JRX3 1037 aa15.76■□□□□ 0.11
COMMD4-215ENST00000566843 ZNF484Q5JVG2 852 aa15.76■□□□□ 0.11
COMMD4-215ENST00000566843 TMTC4Q5T4D3 741 aa15.76■□□□□ 0.11
COMMD4-215ENST00000566843 OGFOD2Q6N063 350 aa15.76■□□□□ 0.11
COMMD4-215ENST00000566843 CYHR1Q6ZMK1 362 aa15.76■□□□□ 0.11
COMMD4-215ENST00000566843 USP51Q70EK9 711 aa15.76■□□□□ 0.11
COMMD4-215ENST00000566843 CMTR2Q8IYT2 770 aaKnown RBP15.76■□□□□ 0.11
COMMD4-215ENST00000566843 ADGRG5Q8IZF4 528 aa15.76■□□□□ 0.11
COMMD4-215ENST00000566843 NPWQ8N729 165 aa15.76■□□□□ 0.11
COMMD4-215ENST00000566843 OR9I1Q8NGQ6 314 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms