RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 LINC01465Q8N7H1 131 aa6.03□□□□□ -1.44
KARS-208ENST00000566772 DEPDC1BQ8WUY9 529 aa6.03□□□□□ -1.44
KARS-208ENST00000566772 IP6K1Q92551 441 aa6.03□□□□□ -1.44
KARS-208ENST00000566772 SECISBP2LQ93073 1101 aaKnown RBP6.03□□□□□ -1.44
KARS-208ENST00000566772 PBKQ96KB5 322 aa6.03□□□□□ -1.44
KARS-208ENST00000566772 DGAT2Q96PD7 388 aa6.03□□□□□ -1.44
KARS-208ENST00000566772 OR2A14Q96R47 310 aa6.03□□□□□ -1.44
KARS-208ENST00000566772 ZNF347Q96SE7 839 aa6.03□□□□□ -1.44
KARS-208ENST00000566772 THAP7Q9BT49 309 aaPredicted RBP6.03□□□□□ -1.44
KARS-208ENST00000566772 NUF2Q9BZD4 464 aa6.03□□□□□ -1.44
KARS-208ENST00000566772 FAM129AQ9BZQ8 928 aa6.03□□□□□ -1.44
KARS-208ENST00000566772 PLK3Q9H4B4 646 aa6.03□□□□□ -1.44
KARS-208ENST00000566772 PDZD7Q9H5P4 517 aa6.03□□□□□ -1.44
KARS-208ENST00000566772 TXNRD2Q9NNW7 524 aa6.03□□□□□ -1.44
KARS-208ENST00000566772 SETD4Q9NVD3 440 aa6.03□□□□□ -1.44
KARS-208ENST00000566772 ARHGEF38Q9NXL2 777 aa6.03□□□□□ -1.44
KARS-208ENST00000566772 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.03□□□□□ -1.44
KARS-208ENST00000566772 ASXL1Q8IXJ9 1541 aa6.03□□□□□ -1.44
KARS-208ENST00000566772 GPRASP1Q5JY77 1395 aa6.03□□□□□ -1.44
KARS-208ENST00000566772 ADGRL2O95490 1459 aa6.02□□□□□ -1.44
KARS-208ENST00000566772 GTPBP10A4D1E9 387 aaKnown RBP6.02□□□□□ -1.45
KARS-208ENST00000566772 NUAK1O60285 661 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 NKX2-2O95096 273 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 IRF1P10914 325 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 SLC2A4P14672 509 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 IL7RP16871 459 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 TRIM21P19474 475 aaKnown RBP6.02□□□□□ -1.45
KARS-208ENST00000566772 NR4A1P22736 598 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 CDAP32320 146 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 HDAC4P56524 1084 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 TAP1Q03518 808 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 OLIG2Q13516 323 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 SNTB1Q13884 538 aaKnown RBP6.02□□□□□ -1.45
KARS-208ENST00000566772 TXNRD1Q16881 649 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 SPDYAQ5MJ70 313 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 HMBOX1Q6NT76 420 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 CAVIN1Q6NZI2 390 aaKnown RBP6.02□□□□□ -1.45
KARS-208ENST00000566772 SUSD1Q6UWL2 747 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 ZNF551Q7Z340 670 aaPredicted RBP6.02□□□□□ -1.45
KARS-208ENST00000566772 AACSQ86V21 672 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 METTL23Q86XA0 190 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 EPHX4Q8IUS5 362 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 DHX40Q8IX18 779 aaKnown RBP6.02□□□□□ -1.45
KARS-208ENST00000566772 MINDY1Q8N5J2 469 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 TMEM217Q8N7C4 229 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 Q8TCH9 128 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 TFAP2BQ92481 460 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 CELF1Q92879 486 aaKnown RBP6.02□□□□□ -1.45
KARS-208ENST00000566772 CITED2Q99967 270 aaPredicted RBP6.02□□□□□ -1.45
KARS-208ENST00000566772 NAA11Q9BSU3 229 aaPredicted RBP6.02□□□□□ -1.45
KARS-208ENST00000566772 THUMPD3Q9BV44 507 aaKnown RBP6.02□□□□□ -1.45
KARS-208ENST00000566772 CCDC106Q9BWC9 280 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 TRIM2Q9C040 744 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 PLEKHA4Q9H4M7 779 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 RANGRFQ9HD47 186 aaPredicted RBP6.02□□□□□ -1.45
KARS-208ENST00000566772 KCTD5Q9NXV2 234 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 ANAPC2Q9UJX6 822 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 ADAMTS5Q9UNA0 930 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 IQGAP3Q86VI3 1631 aa6.02□□□□□ -1.45
KARS-208ENST00000566772 AFF2P51816 1311 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 AOX1Q06278 1338 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 SPATA31A1Q5TZJ5 1347 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 ADAMTS13Q76LX8 1427 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 NHSL1Q5SYE7 1610 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 FAM237AA0A1B0GTK4 181 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 NPIPB11E5RHQ5 1161 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 NDUFS3O75489 264 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 FTCDO95954 541 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 IL1AP01583 271 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 HNRNPCP07910 306 aaKnown RBP eCLIP6.01□□□□□ -1.45
KARS-208ENST00000566772 ATF7P17544 494 aaPredicted RBP6.01□□□□□ -1.45
KARS-208ENST00000566772 TNFRSF1AP19438 455 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 PTAFRP25105 342 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 GABRB2P47870 512 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 CLCN3P51790 818 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 ARSFP54793 590 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 YWHAZP63104 245 aaKnown RBP6.01□□□□□ -1.45
KARS-208ENST00000566772 RHAGQ02094 409 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 GRAPQ13588 217 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 ALCAMQ13740 583 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 PKN2Q16513 984 aaKnown RBP6.01□□□□□ -1.45
KARS-208ENST00000566772 ME3Q16798 604 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 CRY2Q49AN0 593 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 CXorf66Q5JRM2 361 aaPredicted RBP6.01□□□□□ -1.45
KARS-208ENST00000566772 LAIR1Q6GTX8 287 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 CFAP77Q6ZQR2 320 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 FAM185AQ8N0U4 392 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 AMER2Q8N7J2 671 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 KIF18AQ8NI77 898 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 MRPS27Q92552 414 aaKnown RBP6.01□□□□□ -1.45
KARS-208ENST00000566772 MMS19Q96T76 1030 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 FSD1LQ9BXM9 530 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 IFIH1Q9BYX4 1025 aaKnown RBP6.01□□□□□ -1.45
KARS-208ENST00000566772 HRH4Q9H3N8 390 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 TRPV4Q9HBA0 871 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 SERTAD4Q9NUC0 356 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 DNAJB9Q9UBS3 223 aa6.01□□□□□ -1.45
KARS-208ENST00000566772 TESQ9UGI8 421 aaKnown RBP6.01□□□□□ -1.45
KARS-208ENST00000566772 SIRT4Q9Y6E7 314 aaPredicted RBP6.01□□□□□ -1.45
KARS-208ENST00000566772 SPHKAPQ2M3C7 1700 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms