RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 CDKN2DP55273 166 aa18.82■□□□□ 0.6
MSLN-207ENST00000566549 FAM83EQ2M2I3 478 aa18.82■□□□□ 0.6
MSLN-207ENST00000566549 LCA5Q86VQ0 697 aa18.82■□□□□ 0.6
MSLN-207ENST00000566549 HHIPL1Q96JK4 782 aa18.82■□□□□ 0.6
MSLN-207ENST00000566549 CREBZFQ9NS37 354 aa18.82■□□□□ 0.6
MSLN-207ENST00000566549 CDH22Q9UJ99 828 aa18.82■□□□□ 0.6
MSLN-207ENST00000566549 PLXNA3P51805 1871 aa18.82■□□□□ 0.6
MSLN-207ENST00000566549 MROH6A6NGR9 719 aa18.82■□□□□ 0.6
MSLN-207ENST00000566549 AIM2O14862 343 aa18.82■□□□□ 0.6
MSLN-207ENST00000566549 LDB2O43679 373 aa18.82■□□□□ 0.6
MSLN-207ENST00000566549 SKAP2O75563 359 aaPredicted RBP18.82■□□□□ 0.6
MSLN-207ENST00000566549 PDHA1P08559 390 aa18.82■□□□□ 0.6
MSLN-207ENST00000566549 ARSAP15289 507 aa18.82■□□□□ 0.6
MSLN-207ENST00000566549 ABL2P42684 1182 aa18.82■□□□□ 0.6
MSLN-207ENST00000566549 TMCO4Q5TGY1 634 aa18.82■□□□□ 0.6
MSLN-207ENST00000566549 IL31Q6EBC2 164 aa18.82■□□□□ 0.6
MSLN-207ENST00000566549 ACAD11Q709F0 780 aa18.82■□□□□ 0.6
MSLN-207ENST00000566549 HPS6Q86YV9 775 aa18.82■□□□□ 0.6
MSLN-207ENST00000566549 PYDC1Q8WXC3 89 aa18.82■□□□□ 0.6
MSLN-207ENST00000566549 ZNF333Q96JL9 665 aa18.82■□□□□ 0.6
MSLN-207ENST00000566549 SPATA17Q96L03 361 aa18.82■□□□□ 0.6
MSLN-207ENST00000566549 RANBP9Q96S59 729 aa18.82■□□□□ 0.6
MSLN-207ENST00000566549 ELAC1Q9H777 363 aaKnown RBP18.82■□□□□ 0.6
MSLN-207ENST00000566549 NCKIPSDQ9NZQ3 722 aa18.82■□□□□ 0.6
MSLN-207ENST00000566549 PPM1HQ9ULR3 514 aa18.82■□□□□ 0.6
MSLN-207ENST00000566549 CDYLQ9Y232 598 aa18.82■□□□□ 0.6
MSLN-207ENST00000566549 PRAMEF11O60813 436 aa18.81■□□□□ 0.6
MSLN-207ENST00000566549 PQBP1O60828 265 aaKnown RBP18.81■□□□□ 0.6
MSLN-207ENST00000566549 COL6A1P12109 1028 aa18.81■□□□□ 0.6
MSLN-207ENST00000566549 PIK3R1P27986 724 aa18.81■□□□□ 0.6
MSLN-207ENST00000566549 CLCN5P51795 746 aa18.81■□□□□ 0.6
MSLN-207ENST00000566549 RPS24P62847 133 aaKnown RBP18.81■□□□□ 0.6
MSLN-207ENST00000566549 TBL3Q12788 808 aaKnown RBP18.81■□□□□ 0.6
MSLN-207ENST00000566549 ASPHQ12797 758 aa18.81■□□□□ 0.6
MSLN-207ENST00000566549 GPR158Q5T848 1215 aa18.81■□□□□ 0.6
MSLN-207ENST00000566549 SNX32Q86XE0 403 aa18.81■□□□□ 0.6
MSLN-207ENST00000566549 NPAS4Q8IUM7 802 aa18.81■□□□□ 0.6
MSLN-207ENST00000566549 FBXO22Q8NEZ5 403 aa18.81■□□□□ 0.6
MSLN-207ENST00000566549 OR13C4Q8NGS5 318 aa18.81■□□□□ 0.6
MSLN-207ENST00000566549 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.81■□□□□ 0.6
MSLN-207ENST00000566549 ARHGAP26Q9UNA1 814 aa18.81■□□□□ 0.6
MSLN-207ENST00000566549 ZFP37Q9Y6Q3 630 aaPredicted RBP18.81■□□□□ 0.6
MSLN-207ENST00000566549 LOC285095A0A1B0GVY8 99 aa18.81■□□□□ 0.6
MSLN-207ENST00000566549 TBC1D4O60343 1298 aa18.81■□□□□ 0.6
MSLN-207ENST00000566549 PRSS56P0CW18 603 aa18.81■□□□□ 0.6
MSLN-207ENST00000566549 ANPEPP15144 967 aa18.81■□□□□ 0.6
MSLN-207ENST00000566549 ATP6V1C1P21283 382 aa18.81■□□□□ 0.6
MSLN-207ENST00000566549 ATP5F1P24539 256 aaPredicted RBP18.81■□□□□ 0.6
MSLN-207ENST00000566549 PRKAA2P54646 552 aa18.81■□□□□ 0.6
MSLN-207ENST00000566549 CCL23P55773 120 aa18.81■□□□□ 0.6
MSLN-207ENST00000566549 TECRLQ5HYJ1 363 aa18.81■□□□□ 0.6
MSLN-207ENST00000566549 TMEM207Q6UWW9 146 aa18.81■□□□□ 0.6
MSLN-207ENST00000566549 MYLK4Q86YV6 388 aaPredicted RBP18.81■□□□□ 0.6
MSLN-207ENST00000566549 DENND1CQ8IV53 801 aa18.81■□□□□ 0.6
MSLN-207ENST00000566549 SEPT8Q92599 483 aa18.81■□□□□ 0.6
MSLN-207ENST00000566549 FATE1Q969F0 183 aa18.81■□□□□ 0.6
MSLN-207ENST00000566549 CXorf56Q9H5V9 222 aa18.81■□□□□ 0.6
MSLN-207ENST00000566549 VWA7Q9Y334 891 aa18.81■□□□□ 0.6
MSLN-207ENST00000566549 MKI67P46013 3256 aaKnown RBP18.8■□□□□ 0.6
MSLN-207ENST00000566549 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.8■□□□□ 0.6
MSLN-207ENST00000566549 A8MT66 165 aa18.8■□□□□ 0.6
MSLN-207ENST00000566549 SCAMP3O14828 347 aaKnown RBP18.8■□□□□ 0.6
MSLN-207ENST00000566549 GOT2P00505 430 aaKnown RBP18.8■□□□□ 0.6
MSLN-207ENST00000566549 LTA4HP09960 611 aaKnown RBP18.8■□□□□ 0.6
MSLN-207ENST00000566549 ZDHHC11BP0C7U3 371 aa18.8■□□□□ 0.6
MSLN-207ENST00000566549 OR1D2P34982 312 aa18.8■□□□□ 0.6
MSLN-207ENST00000566549 NUDT2P50583 147 aa18.8■□□□□ 0.6
MSLN-207ENST00000566549 RING1Q06587 406 aa18.8■□□□□ 0.6
MSLN-207ENST00000566549 AGAP9Q5VTM2 703 aa18.8■□□□□ 0.6
MSLN-207ENST00000566549 METTL21CQ5VZV1 264 aa18.8■□□□□ 0.6
MSLN-207ENST00000566549 ANKS3Q6ZW76 656 aa18.8■□□□□ 0.6
MSLN-207ENST00000566549 FAM126BQ8IXS8 530 aa18.8■□□□□ 0.6
MSLN-207ENST00000566549 KDM1BQ8NB78 822 aa18.8■□□□□ 0.6
MSLN-207ENST00000566549 PXYLP1Q8TE99 480 aa18.8■□□□□ 0.6
MSLN-207ENST00000566549 EXT2Q93063 718 aa18.8■□□□□ 0.6
MSLN-207ENST00000566549 MFSD1Q9H3U5 465 aa18.8■□□□□ 0.6
MSLN-207ENST00000566549 ALG9Q9H6U8 611 aa18.8■□□□□ 0.6
MSLN-207ENST00000566549 LAMA2P24043 3122 aaKnown RBP18.8■□□□□ 0.6
MSLN-207ENST00000566549 H7C4K7 107 aa18.8■□□□□ 0.6
MSLN-207ENST00000566549 SLC7A4O43246 635 aa18.8■□□□□ 0.6
MSLN-207ENST00000566549 PAPSS2O95340 614 aaPredicted RBP18.8■□□□□ 0.6
MSLN-207ENST00000566549 S1PR4O95977 384 aa18.8■□□□□ 0.6
MSLN-207ENST00000566549 TSPAN8P19075 237 aa18.8■□□□□ 0.6
MSLN-207ENST00000566549 ATP5C1P36542 298 aaKnown RBP18.8■□□□□ 0.6
MSLN-207ENST00000566549 MAPKAPK2P49137 400 aa18.8■□□□□ 0.6
MSLN-207ENST00000566549 KPNA2P52292 529 aaKnown RBP18.8■□□□□ 0.6
MSLN-207ENST00000566549 BFSP2Q13515 415 aa18.8■□□□□ 0.6
MSLN-207ENST00000566549 RYBPQ8N488 228 aaPredicted RBP18.8■□□□□ 0.6
MSLN-207ENST00000566549 ACTRT2Q8TDY3 377 aa18.8■□□□□ 0.6
MSLN-207ENST00000566549 TADA1Q96BN2 335 aa18.8■□□□□ 0.6
MSLN-207ENST00000566549 TNFRSF12AQ9NP84 129 aa18.8■□□□□ 0.6
MSLN-207ENST00000566549 GKN1Q9NS71 199 aa18.8■□□□□ 0.6
MSLN-207ENST00000566549 TET1Q8NFU7 2136 aa18.8■□□□□ 0.6
MSLN-207ENST00000566549 IRF1P10914 325 aa18.79■□□□□ 0.6
MSLN-207ENST00000566549 YBEYP58557 167 aaPredicted RBP18.79■□□□□ 0.6
MSLN-207ENST00000566549 AP2B1P63010 937 aa18.79■□□□□ 0.6
MSLN-207ENST00000566549 NSUN2Q08J23 767 aaKnown RBP eCLIP18.79■□□□□ 0.6
MSLN-207ENST00000566549 KLC3Q6P597 504 aa18.79■□□□□ 0.6
MSLN-207ENST00000566549 DEFB128Q7Z7B8 93 aa18.79■□□□□ 0.6
MSLN-207ENST00000566549 KBTBD2Q8IY47 623 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms