RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 COQ6Q9Y2Z9 468 aa20.33■□□□□ 0.85
CLN6-207ENST00000566347 ANKRD36A6QL64 1941 aa20.32■□□□□ 0.84
CLN6-207ENST00000566347 CFAP69A5D8W1 941 aa20.32■□□□□ 0.84
CLN6-207ENST00000566347 LMO7DNF2Z398 122 aa20.32■□□□□ 0.84
CLN6-207ENST00000566347 LZTS3O60299 673 aaPredicted RBP20.32■□□□□ 0.84
CLN6-207ENST00000566347 MYF5P13349 255 aa20.32■□□□□ 0.84
CLN6-207ENST00000566347 HTR1BP28222 390 aa20.32■□□□□ 0.84
CLN6-207ENST00000566347 RPIAP49247 311 aa20.32■□□□□ 0.84
CLN6-207ENST00000566347 LIG3P49916 1009 aa20.32■□□□□ 0.84
CLN6-207ENST00000566347 UBASH3AP57075 661 aa20.32■□□□□ 0.84
CLN6-207ENST00000566347 AP1S1P61966 158 aa20.32■□□□□ 0.84
CLN6-207ENST00000566347 POLR2LP62875 67 aaKnown RBP20.32■□□□□ 0.84
CLN6-207ENST00000566347 BCL2L1Q07817 233 aa20.32■□□□□ 0.84
CLN6-207ENST00000566347 NR0B2Q15466 257 aa20.32■□□□□ 0.84
CLN6-207ENST00000566347 WSCD2Q2TBF2 565 aa20.32■□□□□ 0.84
CLN6-207ENST00000566347 TMCO4Q5TGY1 634 aa20.32■□□□□ 0.84
CLN6-207ENST00000566347 LUZP1Q86V48 1076 aa20.32■□□□□ 0.84
CLN6-207ENST00000566347 PAF1Q8N7H5 531 aa20.32■□□□□ 0.84
CLN6-207ENST00000566347 ATL2Q8NHH9 583 aa20.32■□□□□ 0.84
CLN6-207ENST00000566347 MAPK15Q8TD08 544 aa20.32■□□□□ 0.84
CLN6-207ENST00000566347 ECHDC3Q96DC8 303 aa20.32■□□□□ 0.84
CLN6-207ENST00000566347 DCBLD2Q96PD2 775 aa20.32■□□□□ 0.84
CLN6-207ENST00000566347 PSKH2Q96QS6 385 aa20.32■□□□□ 0.84
CLN6-207ENST00000566347 LRRC61Q9BV99 259 aa20.32■□□□□ 0.84
CLN6-207ENST00000566347 BRINP1O60477 761 aa20.31■□□□□ 0.84
CLN6-207ENST00000566347 SERPING1P05155 500 aa20.31■□□□□ 0.84
CLN6-207ENST00000566347 ANXA6P08133 673 aa20.31■□□□□ 0.84
CLN6-207ENST00000566347 IL1R2P27930 398 aa20.31■□□□□ 0.84
CLN6-207ENST00000566347 PBX1P40424 430 aa20.31■□□□□ 0.84
CLN6-207ENST00000566347 ADKP55263 362 aaKnown RBP20.31■□□□□ 0.84
CLN6-207ENST00000566347 ZBED6P86452 979 aa20.31■□□□□ 0.84
CLN6-207ENST00000566347 CDKN3Q16667 212 aa20.31■□□□□ 0.84
CLN6-207ENST00000566347 SMTNL2Q2TAL5 461 aa20.31■□□□□ 0.84
CLN6-207ENST00000566347 TMCO3Q6UWJ1 677 aa20.31■□□□□ 0.84
CLN6-207ENST00000566347 LRRC69Q6ZNQ3 347 aa20.31■□□□□ 0.84
CLN6-207ENST00000566347 ARHGAP36Q6ZRI8 547 aa20.31■□□□□ 0.84
CLN6-207ENST00000566347 POLNQ7Z5Q5 900 aa20.31■□□□□ 0.84
CLN6-207ENST00000566347 ZSWIM9Q86XI8 627 aa20.31■□□□□ 0.84
CLN6-207ENST00000566347 FSTL5Q8N475 847 aaPredicted RBP20.31■□□□□ 0.84
CLN6-207ENST00000566347 TPCN2Q8NHX9 752 aa20.31■□□□□ 0.84
CLN6-207ENST00000566347 BOCQ9BWV1 1114 aa20.31■□□□□ 0.84
CLN6-207ENST00000566347 TCEAL2Q9H3H9 227 aaPredicted RBP20.31■□□□□ 0.84
CLN6-207ENST00000566347 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.31■□□□□ 0.84
CLN6-207ENST00000566347 PNMA8BQ9ULN7 279 aaPredicted RBP20.31■□□□□ 0.84
CLN6-207ENST00000566347 CPED1A4D0V7 1026 aa20.3■□□□□ 0.84
CLN6-207ENST00000566347 EME2A4GXA9 379 aaPredicted RBP20.3■□□□□ 0.84
CLN6-207ENST00000566347 GOLGA6L19H0YKK7 550 aa20.3■□□□□ 0.84
CLN6-207ENST00000566347 RRP8O43159 456 aaKnown RBP20.3■□□□□ 0.84
CLN6-207ENST00000566347 GCATO75600 419 aa20.3■□□□□ 0.84
CLN6-207ENST00000566347 ACTN2P35609 894 aa20.3■□□□□ 0.84
CLN6-207ENST00000566347 HSPA9P38646 679 aaKnown RBP20.3■□□□□ 0.84
CLN6-207ENST00000566347 EIF2S3P41091 472 aaKnown RBP20.3■□□□□ 0.84
CLN6-207ENST00000566347 ABCG1P45844 678 aa20.3■□□□□ 0.84
CLN6-207ENST00000566347 SCNN1BP51168 640 aa20.3■□□□□ 0.84
CLN6-207ENST00000566347 MTM1Q13496 603 aa20.3■□□□□ 0.84
CLN6-207ENST00000566347 C1orf61Q13536 156 aa20.3■□□□□ 0.84
CLN6-207ENST00000566347 LBRQ14739 615 aaKnown RBP20.3■□□□□ 0.84
CLN6-207ENST00000566347 NFATC4Q14934 902 aa20.3■□□□□ 0.84
CLN6-207ENST00000566347 ELOCQ15369 112 aa20.3■□□□□ 0.84
CLN6-207ENST00000566347 C6orf132Q5T0Z8 1188 aa20.3■□□□□ 0.84
CLN6-207ENST00000566347 EFL1Q7Z2Z2 1120 aaKnown RBP20.3■□□□□ 0.84
CLN6-207ENST00000566347 NIPA2Q8N8Q9 360 aa20.3■□□□□ 0.84
CLN6-207ENST00000566347 SNIP1Q8TAD8 396 aaKnown RBP20.3■□□□□ 0.84
CLN6-207ENST00000566347 TEKT4Q8WW24 435 aa20.3■□□□□ 0.84
CLN6-207ENST00000566347 HSPH1Q92598 858 aa20.3■□□□□ 0.84
CLN6-207ENST00000566347 NAT6Q93015 286 aa20.3■□□□□ 0.84
CLN6-207ENST00000566347 APOOQ9BUR5 198 aa20.3■□□□□ 0.84
CLN6-207ENST00000566347 IP6K2Q9UHH9 426 aa20.3■□□□□ 0.84
CLN6-207ENST00000566347 CAPN11Q9UMQ6 739 aa20.3■□□□□ 0.84
CLN6-207ENST00000566347 ASXL3Q9C0F0 2248 aa20.3■□□□□ 0.84
CLN6-207ENST00000566347 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.29■□□□□ 0.84
CLN6-207ENST00000566347 TLX3O43711 291 aaPredicted RBP20.29■□□□□ 0.84
CLN6-207ENST00000566347 RASGRP1O95267 797 aa20.29■□□□□ 0.84
CLN6-207ENST00000566347 ALPIP09923 528 aa20.29■□□□□ 0.84
CLN6-207ENST00000566347 ELFN1P0C7U0 828 aa20.29■□□□□ 0.84
CLN6-207ENST00000566347 TSHRP16473 764 aa20.29■□□□□ 0.84
CLN6-207ENST00000566347 HK3P52790 923 aa20.29■□□□□ 0.84
CLN6-207ENST00000566347 ZNF235Q14590 738 aa20.29■□□□□ 0.84
CLN6-207ENST00000566347 INPP5AQ14642 412 aa20.29■□□□□ 0.84
CLN6-207ENST00000566347 GUSBP11Q6P575 273 aa20.29■□□□□ 0.84
CLN6-207ENST00000566347 BBS5Q8N3I7 341 aa20.29■□□□□ 0.84
CLN6-207ENST00000566347 SDR16C5Q8N3Y7 309 aa20.29■□□□□ 0.84
CLN6-207ENST00000566347 SCG3Q8WXD2 468 aaKnown RBP20.29■□□□□ 0.84
CLN6-207ENST00000566347 FGF11Q92914 225 aa20.29■□□□□ 0.84
CLN6-207ENST00000566347 CSPG4P5Q96PW8 444 aa20.29■□□□□ 0.84
CLN6-207ENST00000566347 THAP2Q9H0W7 228 aa20.29■□□□□ 0.84
CLN6-207ENST00000566347 DOLKQ9UPQ8 538 aa20.29■□□□□ 0.84
CLN6-207ENST00000566347 LUC7L2Q9Y383 392 aaKnown RBP20.29■□□□□ 0.84
CLN6-207ENST00000566347 PCDHB1Q9Y5F3 818 aa20.29■□□□□ 0.84
CLN6-207ENST00000566347 IGSF10Q6WRI0 2623 aa20.28■□□□□ 0.84
CLN6-207ENST00000566347 A0A1W2PQ67 120 aa20.28■□□□□ 0.84
CLN6-207ENST00000566347 TRAFD1O14545 582 aaPredicted RBP20.28■□□□□ 0.84
CLN6-207ENST00000566347 MUSKO15146 869 aa20.28■□□□□ 0.84
CLN6-207ENST00000566347 YY2O15391 372 aa20.28■□□□□ 0.84
CLN6-207ENST00000566347 CSO75390 466 aaKnown RBP20.28■□□□□ 0.84
CLN6-207ENST00000566347 PRKCGP05129 697 aa20.28■□□□□ 0.84
CLN6-207ENST00000566347 PCCBP05166 539 aa20.28■□□□□ 0.84
CLN6-207ENST00000566347 RARAP10276 462 aa20.28■□□□□ 0.84
CLN6-207ENST00000566347 CTSEP14091 401 aa20.28■□□□□ 0.84
CLN6-207ENST00000566347 TCF4P15884 667 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms