RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 ARHGAP8P85298 464 aa2.27□□□□□ -2.05
SMG1-212ENST00000566328 RELQ04864 619 aaPredicted RBP2.27□□□□□ -2.05
SMG1-212ENST00000566328 THOC5Q13769 683 aaKnown RBP2.27□□□□□ -2.05
SMG1-212ENST00000566328 LONRF1Q17RB8 773 aa2.27□□□□□ -2.05
SMG1-212ENST00000566328 AP5B1Q2VPB7 878 aa2.27□□□□□ -2.05
SMG1-212ENST00000566328 SLC44A2Q8IWA5 706 aaPredicted RBP2.27□□□□□ -2.05
SMG1-212ENST00000566328 CCAR1Q8IX12 1150 aaKnown RBP2.27□□□□□ -2.05
SMG1-212ENST00000566328 GHDCQ8N2G8 530 aa2.27□□□□□ -2.05
SMG1-212ENST00000566328 SPATA22Q8NHS9 363 aa2.27□□□□□ -2.05
SMG1-212ENST00000566328 TMEM170AQ8WVE7 144 aa2.27□□□□□ -2.05
SMG1-212ENST00000566328 ZNF583Q96ND8 569 aa2.27□□□□□ -2.05
SMG1-212ENST00000566328 KXD1Q9BQD3 176 aa2.27□□□□□ -2.05
SMG1-212ENST00000566328 PCDH9Q9HC56 1237 aa2.27□□□□□ -2.05
SMG1-212ENST00000566328 PRDM8Q9NQV8 689 aa2.27□□□□□ -2.05
SMG1-212ENST00000566328 FNIP2Q9P278 1114 aa2.27□□□□□ -2.05
SMG1-212ENST00000566328 NDRG3Q9UGV2 375 aa2.27□□□□□ -2.05
SMG1-212ENST00000566328 CNPY2Q9Y2B0 182 aa2.27□□□□□ -2.05
SMG1-212ENST00000566328 PCDHGB5Q9Y5G0 923 aa2.27□□□□□ -2.05
SMG1-212ENST00000566328 GREB1LQ9C091 1923 aaPredicted RBP2.27□□□□□ -2.05
SMG1-212ENST00000566328 ANO9A1A5B4 782 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 TYW5A2RUC4 315 aaKnown RBP2.26□□□□□ -2.05
SMG1-212ENST00000566328 C17orf100A8MU93 164 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 EBAG9O00559 213 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 SOCS6O14544 535 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 APAF1O14727 1248 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 NDUFS7O75251 213 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 TNNT1P13805 278 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 TRIM27P14373 513 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 HNRNPH1P31943 449 aaKnown RBP2.26□□□□□ -2.05
SMG1-212ENST00000566328 PIGAP37287 484 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 TMPOP42166 694 aaKnown RBP2.26□□□□□ -2.05
SMG1-212ENST00000566328 TECP42680 631 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 BTKQ06187 659 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 NEDD9Q14511 834 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 STARD3Q14849 445 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 ARHGEF6Q15052 776 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 LRRC24Q50LG9 513 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 TCTE1Q5JU00 501 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 KCNT1Q5JUK3 1230 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 TRNP1Q6NT89 227 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 WDR73Q6P4I2 378 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 SLC27A1Q6PCB7 646 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 KLHL17Q6TDP4 642 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 SYNE3Q6ZMZ3 975 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 KMT5CQ86Y97 462 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 SETD9Q8NE22 299 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 DNAAF1Q8NEP3 725 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 STYXQ8WUJ0 223 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 ALG14Q96F25 216 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 TMEM41AQ96HV5 264 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 ATOH8Q96SQ7 321 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 EGFL8Q99944 293 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 NPLQ9BXD5 320 aaPredicted RBP2.26□□□□□ -2.05
SMG1-212ENST00000566328 MCM9Q9NXL9 1143 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 C1RLQ9NZP8 487 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 FAF1Q9UNN5 650 aaPredicted RBP2.26□□□□□ -2.05
SMG1-212ENST00000566328 CACNA1FO60840 1977 aa2.26□□□□□ -2.05
SMG1-212ENST00000566328 A0A1W2PNU3 283 aaPredicted RBP2.25□□□□□ -2.05
SMG1-212ENST00000566328 FFAR2O15552 330 aa2.25□□□□□ -2.05
SMG1-212ENST00000566328 PLRG1O43660 514 aaKnown RBP2.25□□□□□ -2.05
SMG1-212ENST00000566328 ATP2C2O75185 946 aa2.25□□□□□ -2.05
SMG1-212ENST00000566328 KRTAP5-8O75690 187 aa2.25□□□□□ -2.05
SMG1-212ENST00000566328 RGS11O94810 467 aa2.25□□□□□ -2.05
SMG1-212ENST00000566328 TNFRSF6BO95407 300 aa2.25□□□□□ -2.05
SMG1-212ENST00000566328 IGLV1-44P01699 117 aa2.25□□□□□ -2.05
SMG1-212ENST00000566328 CYP21A2P08686 494 aa2.25□□□□□ -2.05
SMG1-212ENST00000566328 HLA-DOBP13765 273 aa2.25□□□□□ -2.05
SMG1-212ENST00000566328 ZNF8P17098 575 aaPredicted RBP2.25□□□□□ -2.05
SMG1-212ENST00000566328 SP100P23497 879 aaPredicted RBP2.25□□□□□ -2.05
SMG1-212ENST00000566328 GNL1P36915 607 aaPredicted RBP2.25□□□□□ -2.05
SMG1-212ENST00000566328 PTPN9P43378 593 aa2.25□□□□□ -2.05
SMG1-212ENST00000566328 MCM2P49736 904 aa2.25□□□□□ -2.05
SMG1-212ENST00000566328 AK2P54819 239 aa2.25□□□□□ -2.05
SMG1-212ENST00000566328 DSCR10P59022 87 aa2.25□□□□□ -2.05
SMG1-212ENST00000566328 EEF1A1P68104 462 aaKnown RBP2.25□□□□□ -2.05
SMG1-212ENST00000566328 IRX1P78414 480 aaPredicted RBP2.25□□□□□ -2.05
SMG1-212ENST00000566328 EFNB3Q15768 340 aa2.25□□□□□ -2.05
SMG1-212ENST00000566328 EEF1A1P5Q5VTE0 462 aa2.25□□□□□ -2.05
SMG1-212ENST00000566328 CES5AQ6NT32 575 aa2.25□□□□□ -2.05
SMG1-212ENST00000566328 FAAP20Q6NZ36 180 aa2.25□□□□□ -2.05
SMG1-212ENST00000566328 GJB7Q6PEY0 223 aa2.25□□□□□ -2.05
SMG1-212ENST00000566328 SUSD1Q6UWL2 747 aa2.25□□□□□ -2.05
SMG1-212ENST00000566328 KCTD8Q6ZWB6 473 aa2.25□□□□□ -2.05
SMG1-212ENST00000566328 CHD1LQ86WJ1 897 aa2.25□□□□□ -2.05
SMG1-212ENST00000566328 KLHDC9Q8NEP7 349 aa2.25□□□□□ -2.05
SMG1-212ENST00000566328 PPM1EQ8WY54 764 aa2.25□□□□□ -2.05
SMG1-212ENST00000566328 ZNF524Q96C55 264 aa2.25□□□□□ -2.05
SMG1-212ENST00000566328 WDR13Q9H1Z4 485 aa2.25□□□□□ -2.05
SMG1-212ENST00000566328 C17orf75Q9HAS0 396 aa2.25□□□□□ -2.05
SMG1-212ENST00000566328 HCFC1R1Q9NWW0 138 aa2.25□□□□□ -2.05
SMG1-212ENST00000566328 RALYQ9UKM9 306 aaKnown RBP2.25□□□□□ -2.05
SMG1-212ENST00000566328 PSAT1Q9Y617 370 aa2.25□□□□□ -2.05
SMG1-212ENST00000566328 CAVIN2O95810 425 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 ADAP00813 363 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 PATE4P0C8F1 98 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 PCNAP12004 261 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 ABCB4P21439 1286 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 CHATP28329 748 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 CHRNB4P30926 498 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 MMP14P50281 582 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms