RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 UBAP2LQ14157 1087 aaKnown RBP12.88□□□□□ -0.35
RNF40-208ENST00000565995 CLCA4Q14CN2 919 aa12.88□□□□□ -0.35
RNF40-208ENST00000565995 WSCD2Q2TBF2 565 aa12.88□□□□□ -0.35
RNF40-208ENST00000565995 FAM102AQ5T9C2 384 aaPredicted RBP12.88□□□□□ -0.35
RNF40-208ENST00000565995 SPRED1Q7Z699 444 aa12.88□□□□□ -0.35
RNF40-208ENST00000565995 ZFAND4Q86XD8 727 aa12.88□□□□□ -0.35
RNF40-208ENST00000565995 RYBPQ8N488 228 aaPredicted RBP12.88□□□□□ -0.35
RNF40-208ENST00000565995 ATL2Q8NHH9 583 aa12.88□□□□□ -0.35
RNF40-208ENST00000565995 USP7Q93009 1102 aa12.88□□□□□ -0.35
RNF40-208ENST00000565995 CMKLR1Q99788 373 aa12.88□□□□□ -0.35
RNF40-208ENST00000565995 SYNDIG1Q9H7V2 258 aa12.88□□□□□ -0.35
RNF40-208ENST00000565995 PLCB1Q9NQ66 1216 aa12.88□□□□□ -0.35
RNF40-208ENST00000565995 TMEM63CQ9P1W3 806 aa12.88□□□□□ -0.35
RNF40-208ENST00000565995 SIRPGQ9P1W8 387 aa12.88□□□□□ -0.35
RNF40-208ENST00000565995 ANKMY1Q9P2S6 941 aa12.88□□□□□ -0.35
RNF40-208ENST00000565995 TUBD1Q9UJT1 453 aa12.88□□□□□ -0.35
RNF40-208ENST00000565995 ZNF106Q9H2Y7 1883 aaKnown RBP12.88□□□□□ -0.35
RNF40-208ENST00000565995 SPTBN1Q01082 2364 aaKnown RBP12.87□□□□□ -0.35
RNF40-208ENST00000565995 CFAP69A5D8W1 941 aa12.87□□□□□ -0.35
RNF40-208ENST00000565995 NUDT21O43809 227 aaKnown RBP12.87□□□□□ -0.35
RNF40-208ENST00000565995 TNFP01375 233 aa12.87□□□□□ -0.35
RNF40-208ENST00000565995 B4GALNT1Q00973 533 aa12.87□□□□□ -0.35
RNF40-208ENST00000565995 HLTFQ14527 1009 aaKnown RBP eCLIP12.87□□□□□ -0.35
RNF40-208ENST00000565995 INPP5AQ14642 412 aa12.87□□□□□ -0.35
RNF40-208ENST00000565995 CLPPQ16740 277 aaPredicted RBP12.87□□□□□ -0.35
RNF40-208ENST00000565995 ATXN7L2Q5T6C5 722 aaPredicted RBP12.87□□□□□ -0.35
RNF40-208ENST00000565995 ENPP7Q6UWV6 458 aa12.87□□□□□ -0.35
RNF40-208ENST00000565995 TMPRSS9Q7Z410 1059 aa12.87□□□□□ -0.35
RNF40-208ENST00000565995 VASH2Q86V25 355 aa12.87□□□□□ -0.35
RNF40-208ENST00000565995 FAM131BQ86XD5 332 aa12.87□□□□□ -0.35
RNF40-208ENST00000565995 IRF2BP1Q8IU81 584 aa12.87□□□□□ -0.35
RNF40-208ENST00000565995 CFAP57Q96MR6 1250 aa12.87□□□□□ -0.35
RNF40-208ENST00000565995 WDR92Q96MX6 357 aa12.87□□□□□ -0.35
RNF40-208ENST00000565995 GDAP1L1Q96MZ0 367 aa12.87□□□□□ -0.35
RNF40-208ENST00000565995 FOXJ2Q9P0K8 574 aa12.87□□□□□ -0.35
RNF40-208ENST00000565995 SEPT3Q9UH03 358 aa12.87□□□□□ -0.35
RNF40-208ENST00000565995 DNAJC12Q9UKB3 198 aa12.87□□□□□ -0.35
RNF40-208ENST00000565995 PCDHB11Q9Y5F2 797 aa12.87□□□□□ -0.35
RNF40-208ENST00000565995 SPTAN1Q13813 2472 aaKnown RBP12.87□□□□□ -0.35
RNF40-208ENST00000565995 ICE1Q9Y2F5 2266 aa12.87□□□□□ -0.35
RNF40-208ENST00000565995 FAM72CH0Y354 149 aa12.86□□□□□ -0.35
RNF40-208ENST00000565995 TNFRSF10CO14798 259 aa12.86□□□□□ -0.35
RNF40-208ENST00000565995 LSM8O95777 96 aaKnown RBP12.86□□□□□ -0.35
RNF40-208ENST00000565995 GP1BBP13224 206 aa12.86□□□□□ -0.35
RNF40-208ENST00000565995 MTM1Q13496 603 aa12.86□□□□□ -0.35
RNF40-208ENST00000565995 GRM3Q14832 879 aa12.86□□□□□ -0.35
RNF40-208ENST00000565995 NR1D2Q14995 579 aa12.86□□□□□ -0.35
RNF40-208ENST00000565995 C14orf28Q4W4Y0 310 aa12.86□□□□□ -0.35
RNF40-208ENST00000565995 LRRC73Q5JTD7 316 aa12.86□□□□□ -0.35
RNF40-208ENST00000565995 FAM72AQ5TYM5 149 aa12.86□□□□□ -0.35
RNF40-208ENST00000565995 FAM72DQ6L9T8 149 aa12.86□□□□□ -0.35
RNF40-208ENST00000565995 NYAP1Q6ZVC0 841 aa12.86□□□□□ -0.35
RNF40-208ENST00000565995 ZNF438Q7Z4V0 828 aa12.86□□□□□ -0.35
RNF40-208ENST00000565995 C17orf82Q86X59 251 aaPredicted RBP12.86□□□□□ -0.35
RNF40-208ENST00000565995 FAM72BQ86X60 149 aa12.86□□□□□ -0.35
RNF40-208ENST00000565995 ZNF564Q8TBZ8 553 aaPredicted RBP12.86□□□□□ -0.35
RNF40-208ENST00000565995 CENPIQ92674 756 aaPredicted RBP12.86□□□□□ -0.35
RNF40-208ENST00000565995 WRAP53Q9BUR4 548 aaKnown RBP12.86□□□□□ -0.35
RNF40-208ENST00000565995 CDH19Q9H159 772 aa12.86□□□□□ -0.35
RNF40-208ENST00000565995 NOL6Q9H6R4 1146 aaKnown RBP12.86□□□□□ -0.35
RNF40-208ENST00000565995 LRIT1Q9P2V4 623 aa12.86□□□□□ -0.35
RNF40-208ENST00000565995 KLQ9UEF7 1012 aa12.86□□□□□ -0.35
RNF40-208ENST00000565995 DNAI1Q9UI46 699 aa12.86□□□□□ -0.35
RNF40-208ENST00000565995 PCDHGA3Q9Y5H0 932 aa12.86□□□□□ -0.35
RNF40-208ENST00000565995 RNF215Q9Y6U7 377 aa12.86□□□□□ -0.35
RNF40-208ENST00000565995 HGSO14964 777 aaPredicted RBP12.85□□□□□ -0.35
RNF40-208ENST00000565995 B4GAT1O43505 415 aa12.85□□□□□ -0.35
RNF40-208ENST00000565995 RAMP2O60895 175 aa12.85□□□□□ -0.35
RNF40-208ENST00000565995 TMCC1O94876 653 aa12.85□□□□□ -0.35
RNF40-208ENST00000565995 LRIG2O94898 1065 aa12.85□□□□□ -0.35
RNF40-208ENST00000565995 IGSF6O95976 241 aa12.85□□□□□ -0.35
RNF40-208ENST00000565995 CYP11B1P15538 503 aa12.85□□□□□ -0.35
RNF40-208ENST00000565995 TRIM23P36406 574 aa12.85□□□□□ -0.35
RNF40-208ENST00000565995 ARSDP51689 593 aa12.85□□□□□ -0.35
RNF40-208ENST00000565995 KIAA1024LP59773 190 aa12.85□□□□□ -0.35
RNF40-208ENST00000565995 CYP4F2P78329 520 aa12.85□□□□□ -0.35
RNF40-208ENST00000565995 SQSTM1Q13501 440 aa12.85□□□□□ -0.35
RNF40-208ENST00000565995 UGP2Q16851 508 aa12.85□□□□□ -0.35
RNF40-208ENST00000565995 TMEM164Q5U3C3 297 aa12.85□□□□□ -0.35
RNF40-208ENST00000565995 KCTD16Q68DU8 428 aa12.85□□□□□ -0.35
RNF40-208ENST00000565995 BORAQ6PGQ7 559 aa12.85□□□□□ -0.35
RNF40-208ENST00000565995 RD3Q7Z3Z2 195 aa12.85□□□□□ -0.35
RNF40-208ENST00000565995 GPBAR1Q8TDU6 330 aa12.85□□□□□ -0.35
RNF40-208ENST00000565995 NKD1Q969G9 470 aa12.85□□□□□ -0.35
RNF40-208ENST00000565995 HMCESQ96FZ2 354 aa12.85□□□□□ -0.35
RNF40-208ENST00000565995 SEMA6CQ9H3T2 930 aa12.85□□□□□ -0.35
RNF40-208ENST00000565995 RWDD2AQ9UIY3 292 aa12.85□□□□□ -0.35
RNF40-208ENST00000565995 COQ6Q9Y2Z9 468 aa12.85□□□□□ -0.35
RNF40-208ENST00000565995 OR1A2Q9Y585 309 aa12.85□□□□□ -0.35
RNF40-208ENST00000565995 PRRC2CQ9Y520 2896 aaKnown RBP12.85□□□□□ -0.35
RNF40-208ENST00000565995 ITPR2Q14571 2701 aa12.84□□□□□ -0.35
RNF40-208ENST00000565995 SYCE3A1L190 88 aa12.84□□□□□ -0.35
RNF40-208ENST00000565995 TMEM202A6NGA9 273 aa12.84□□□□□ -0.35
RNF40-208ENST00000565995 STMND1H3BQB6 276 aa12.84□□□□□ -0.35
RNF40-208ENST00000565995 CPNE6O95741 557 aa12.84□□□□□ -0.35
RNF40-208ENST00000565995 PNMA6AP0CW24 399 aaPredicted RBP12.84□□□□□ -0.35
RNF40-208ENST00000565995 PRKCSHP14314 528 aaPredicted RBP12.84□□□□□ -0.35
RNF40-208ENST00000565995 MMP12P39900 470 aa12.84□□□□□ -0.35
RNF40-208ENST00000565995 PTPN9P43378 593 aa12.84□□□□□ -0.35
RNF40-208ENST00000565995 MAPK10P53779 464 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms