RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 HNRNPA1L2Q32P51 320 aaKnown RBP18.86■□□□□ 0.61
COMMD4-213ENST00000565834 TXNDC11Q6PKC3 985 aa18.86■□□□□ 0.61
COMMD4-213ENST00000565834 CROCCP2Q86T23 111 aa18.86■□□□□ 0.61
COMMD4-213ENST00000565834 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.86■□□□□ 0.61
COMMD4-213ENST00000565834 GRIN3AQ8TCU5 1115 aa18.86■□□□□ 0.61
COMMD4-213ENST00000565834 EPS8L3Q8TE67 593 aaKnown RBP18.86■□□□□ 0.61
COMMD4-213ENST00000565834 MFSD3Q96ES6 412 aa18.86■□□□□ 0.61
COMMD4-213ENST00000565834 ZNF641Q96N77 438 aaPredicted RBP18.86■□□□□ 0.61
COMMD4-213ENST00000565834 FCRL3Q96P31 734 aaPredicted RBP18.86■□□□□ 0.61
COMMD4-213ENST00000565834 SUV39H2Q9H5I1 410 aa18.86■□□□□ 0.61
COMMD4-213ENST00000565834 CCDC78A2IDD5 438 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 SMIM23A6NLE4 172 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 RASGRF2O14827 1237 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 TCEA3O75764 348 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 PRKCGP05129 697 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 UGT2B4P06133 528 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 PIRTP0C851 137 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 HLA-EP13747 358 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 PRKCHP24723 683 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 NMBRP28336 390 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 EGFLAMQ63HQ2 1017 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 TRMT10BQ6PF06 316 aaKnown RBP18.85■□□□□ 0.61
COMMD4-213ENST00000565834 CYS1Q717R9 158 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 MAFAQ8NHW3 353 aaPredicted RBP18.85■□□□□ 0.61
COMMD4-213ENST00000565834 BRSK1Q8TDC3 778 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 PIH1D2Q8WWB5 315 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 VOPP1Q96AW1 172 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 TMEM245Q9H330 911 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.85■□□□□ 0.61
COMMD4-213ENST00000565834 IL36AQ9UHA7 158 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 STARD13Q9Y3M8 1113 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 FAM169AQ9Y6X4 670 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 ZCWPW2A0A1B0GU75 182 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 TLDC2A0PJX2 215 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 NARSO43776 548 aaKnown RBP18.85■□□□□ 0.61
COMMD4-213ENST00000565834 ALDH1A2O94788 518 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 MYZAPP0CAP1 466 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 SLCO1A2P46721 670 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 TDGQ13569 410 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 EFTUD2Q15029 972 aaKnown RBP eCLIP18.85■□□□□ 0.611e-7■■■■■ 52.3
COMMD4-213ENST00000565834 KBTBD12Q3ZCT8 623 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 HSP90B2PQ58FF3 399 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 GDPD4Q6W3E5 623 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 NLRP9Q7RTR0 991 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 LRIG1Q96JA1 1093 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 ZNF778Q96MU6 729 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 SH3GL2Q99962 352 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 PPCSQ9HAB8 311 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 MOCS1Q9NZB8 636 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 HCN2Q9UL51 889 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 SPO11Q9Y5K1 396 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 WASF2Q9Y6W5 498 aa18.85■□□□□ 0.61
COMMD4-213ENST00000565834 ATG2BQ96BY7 2078 aa18.84■□□□□ 0.61
COMMD4-213ENST00000565834 A0A1W2PQ67 120 aa18.84■□□□□ 0.61
COMMD4-213ENST00000565834 LOC730098B7Z3J9 87 aa18.84■□□□□ 0.61
COMMD4-213ENST00000565834 POC1B-GALNT4F8VUJ3 575 aa18.84■□□□□ 0.61
COMMD4-213ENST00000565834 CRTAMO95727 393 aa18.84■□□□□ 0.61
COMMD4-213ENST00000565834 SRFP11831 508 aa18.84■□□□□ 0.61
COMMD4-213ENST00000565834 HNRNPLP14866 589 aaKnown RBP eCLIP18.84■□□□□ 0.61
COMMD4-213ENST00000565834 SLC8A1P32418 973 aa18.84■□□□□ 0.61
COMMD4-213ENST00000565834 IL12RB1P42701 662 aa18.84■□□□□ 0.61
COMMD4-213ENST00000565834 FRG1Q14331 258 aaKnown RBP18.84■□□□□ 0.61
COMMD4-213ENST00000565834 PON2Q15165 354 aa18.84■□□□□ 0.61
COMMD4-213ENST00000565834 TSTD2Q5T7W7 516 aa18.84■□□□□ 0.61
COMMD4-213ENST00000565834 ZNF513Q8N8E2 541 aaPredicted RBP18.84■□□□□ 0.61
COMMD4-213ENST00000565834 ECHDC3Q96DC8 303 aa18.84■□□□□ 0.61
COMMD4-213ENST00000565834 CERS2Q96G23 380 aa18.84■□□□□ 0.61
COMMD4-213ENST00000565834 OSBPL1AQ9BXW6 950 aa18.84■□□□□ 0.61
COMMD4-213ENST00000565834 CENPHQ9H3R5 247 aa18.84■□□□□ 0.61
COMMD4-213ENST00000565834 MED4Q9NPJ6 270 aa18.84■□□□□ 0.61
COMMD4-213ENST00000565834 PPANQ9NQ55 473 aaKnown RBP18.84■□□□□ 0.61
COMMD4-213ENST00000565834 PRDM6Q9NQX0 595 aa18.84■□□□□ 0.61
COMMD4-213ENST00000565834 HACD3Q9P035 362 aa18.84■□□□□ 0.61
COMMD4-213ENST00000565834 FETUBQ9UGM5 382 aa18.84■□□□□ 0.61
COMMD4-213ENST00000565834 MROH6A6NGR9 719 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 K7EQS6 105 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 NPC1O15118 1278 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 LDB2O43679 373 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 SIN3BO75182 1162 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 LEFTY1O75610 366 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 PAPSS2O95340 614 aaPredicted RBP18.83■□□□□ 0.61
COMMD4-213ENST00000565834 GLULP15104 373 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 PAMP19021 973 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 ARSIQ5FYB1 569 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 C9orf64Q5T6V5 341 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 EMC10Q5UCC4 262 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 ESRP1Q6NXG1 681 aaKnown RBP18.83■□□□□ 0.61
COMMD4-213ENST00000565834 ZNF449Q6P9G9 518 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 GLT6D1Q7Z4J2 308 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 CTAGE3PQ8IX95 158 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 UNC5BQ8IZJ1 945 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 OR8D1Q8WZ84 308 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 PKNOX2Q96KN3 472 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 KLHL32Q96NJ5 620 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 SMIM14Q96QK8 99 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 ACOX2Q99424 681 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 ZDHHC4Q9NPG8 344 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 SLC2A4RGQ9NR83 387 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 TREX1Q9NSU2 369 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 CACNA2D2Q9NY47 1150 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms