RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 PRDM16Q9HAZ2 1276 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 ASNSD1Q9NWL6 643 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 TMEM160Q9NX00 188 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 UBE2J1Q9Y385 318 aaPredicted RBP4.45□□□□□ -1.7
LINC00561-201ENST00000565815 MTCH2Q9Y6C9 303 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 TMPRSS11DO60235 418 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 BAIAP3O94812 1187 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 SLPIP03973 132 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 CHN1P15882 459 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 ACLYP53396 1101 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 TXNL4AP83876 142 aaKnown RBP4.44□□□□□ -1.7
LINC00561-201ENST00000565815 GPS2Q13227 327 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 ALFQ53S48 1182 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 SLC29A4Q7RTT9 530 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 TEX11Q8IYF3 940 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 TRPV1Q8NER1 839 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 RITA1Q96K30 269 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 SH2D3AQ9BRG2 576 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 PHF7Q9BWX1 381 aaPredicted RBP4.44□□□□□ -1.7
LINC00561-201ENST00000565815 PUS3Q9BZE2 481 aaKnown RBP4.44□□□□□ -1.7
LINC00561-201ENST00000565815 PORCNQ9H237 461 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 SYNPO2LQ9H987 977 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 TXNRD2Q9NNW7 524 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 KCNK9Q9NPC2 374 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 Q9Y3F1 56 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 COPG1Q9Y678 874 aaKnown RBP4.44□□□□□ -1.7
LINC00561-201ENST00000565815 GOLGB1Q14789 3259 aaKnown RBP4.44□□□□□ -1.7
LINC00561-201ENST00000565815 VWA3AA6NCI4 1184 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 EFCAB8A8MWE9 144 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 FSHBP01225 129 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 ZNF37AP17032 561 aaPredicted RBP4.44□□□□□ -1.7
LINC00561-201ENST00000565815 CMA1P23946 247 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 VPS41P49754 854 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 RCAN1P53805 252 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 YPEL5P62699 121 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 ZBTB16Q05516 673 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 CDK18Q07002 472 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 LRMPQ12912 555 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 KCNB1Q14721 858 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 ZXDCQ2QGD7 858 aaPredicted RBP4.44□□□□□ -1.7
LINC00561-201ENST00000565815 FBXO43Q4G163 708 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 CCDC158Q5M9N0 1113 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 MMS22LQ6ZRQ5 1243 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 FAM43BQ6ZT52 329 aaPredicted RBP4.44□□□□□ -1.7
LINC00561-201ENST00000565815 FSIP1Q8NA03 581 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 C2CD4CQ8TF44 421 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 IGFBPL1Q8WX77 278 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 CCDC34Q96HJ3 373 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 KRTAP9-3Q9BYQ3 159 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 BOLA2Q9H3K6 86 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 FLRT1Q9NZU1 646 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 TBC1D3DA0A087WVF3 549 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 TBC1D3IA0A087WXS9 549 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 TBC1D3EA0A087X179 549 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 TBC1D3KA0A087X1G2 549 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.44□□□□□ -1.7
LINC00561-201ENST00000565815 TBC1D3BA6NDS4 549 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 TBC1D3FA6NER0 549 aaPredicted RBP4.44□□□□□ -1.7
LINC00561-201ENST00000565815 TBC1D3LB9A6J9 549 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 NKX2-8O15522 239 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 KLK10O43240 276 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 SLC3A2P08195 630 aaKnown RBP4.44□□□□□ -1.7
LINC00561-201ENST00000565815 FAM163BP0C2L3 166 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 TBC1D3HP0C7X1 549 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 CD19P15391 556 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 GRK5P34947 590 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 PTPN9P43378 593 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 RFX5P48382 616 aaPredicted RBP4.44□□□□□ -1.7
LINC00561-201ENST00000565815 ACTR2P61160 394 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 FHL2Q14192 279 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 TEDDM1Q5T9Z0 273 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 WDR78Q5VTH9 848 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 TBC1D3GQ6DHY5 549 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 TBC1D3CQ6IPX1 549 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 CPLX2Q6PUV4 134 aaKnown RBP4.44□□□□□ -1.7
LINC00561-201ENST00000565815 C11orf57Q6ZUT1 292 aaPredicted RBP4.44□□□□□ -1.7
LINC00561-201ENST00000565815 TBC1D3Q8IZP1 549 aaPredicted RBP4.44□□□□□ -1.7
LINC00561-201ENST00000565815 LINC00301Q8NCQ3 95 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 AKAP1Q92667 903 aaKnown RBP eCLIP4.44□□□□□ -1.7
LINC00561-201ENST00000565815 KTI12Q96EK9 354 aaPredicted RBP4.44□□□□□ -1.7
LINC00561-201ENST00000565815 AGAP2Q99490 1192 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 SDF4Q9BRK5 362 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 SPATC1LQ9H0A9 340 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 TUBE1Q9UJT0 475 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 ZNF215Q9UL58 517 aaPredicted RBP4.44□□□□□ -1.7
LINC00561-201ENST00000565815 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.44□□□□□ -1.7
LINC00561-201ENST00000565815 PLXNA1Q9UIW2 1896 aa4.44□□□□□ -1.7
LINC00561-201ENST00000565815 PROB1E7EW31 1015 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 ALDOCP09972 364 aaKnown RBP4.43□□□□□ -1.7
LINC00561-201ENST00000565815 EDN2P20800 178 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 AVPR2P30518 371 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 ME1P48163 572 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 AARSP49588 968 aaKnown RBP eCLIP4.43□□□□□ -1.7
LINC00561-201ENST00000565815 ZXDAP98168 799 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 UBE3AQ05086 875 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 GALNT2Q10471 571 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 KCTD2Q14681 263 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 STK38Q15208 465 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 PLAC9Q5JTB6 97 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 ZNF569Q5MCW4 686 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms