RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 KLQ9UEF7 1012 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 SEPT3Q9UH03 358 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 GPR34Q9UPC5 381 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 ATP8A1Q9Y2Q0 1164 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 PCDHGC4Q9Y5F7 938 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 RAI2Q9Y5P3 530 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 SPAG17Q6Q759 2223 aa6.46□□□□□ -1.38
TCF4-228ENST00000565393 MYO18AQ92614 2054 aaKnown RBP6.46□□□□□ -1.38
TCF4-228ENST00000565393 LY6G6EA0A0G2JKS1 128 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 A0A1B0GTH6 734 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.45□□□□□ -1.38
TCF4-228ENST00000565393 SYCE3A1L190 88 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 CFAP69A5D8W1 941 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 LMO7DNF2Z398 122 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 MYO1FO00160 1098 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 AGRPO00253 132 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 CACNB4O00305 520 aaPredicted RBP6.45□□□□□ -1.38
TCF4-228ENST00000565393 RECQL5O94762 991 aaPredicted RBP6.45□□□□□ -1.38
TCF4-228ENST00000565393 SERPING1P05155 500 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 ALPIP09923 528 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 ELFN1P0C7U0 828 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 RARAP10276 462 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 PRKCIP41743 596 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 LSSP48449 732 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 ZNF135P52742 658 aaPredicted RBP6.45□□□□□ -1.38
TCF4-228ENST00000565393 SLC10A7Q0GE19 358 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 KRT81Q14533 505 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 ZNF235Q14590 738 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 IQCB1Q15051 598 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 HADHQ16836 314 aaKnown RBP6.45□□□□□ -1.38
TCF4-228ENST00000565393 ISXQ2M1V0 245 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 ALG11Q2TAA5 492 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 SMTNL2Q2TAL5 461 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 TBC1D25Q3MII6 688 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 PERM1Q5SV97 790 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 C6orf132Q5T0Z8 1188 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 ZFYVE27Q5T4F4 411 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 MARC1Q5VT66 337 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 BROXQ5VW32 411 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 CDCP2Q5VXM1 449 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 AFMIDQ63HM1 303 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 LVRNQ6Q4G3 990 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 TMCO3Q6UWJ1 677 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 LIPIQ6XZB0 460 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 MACC1Q6ZN28 852 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 RBM44Q6ZP01 1051 aaKnown RBP6.45□□□□□ -1.38
TCF4-228ENST00000565393 TAF8Q7Z7C8 310 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 LUZP1Q86V48 1076 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 ARHGAP12Q8IWW6 846 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 TP53INP2Q8IXH6 220 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 FSTL5Q8N475 847 aaPredicted RBP6.45□□□□□ -1.38
TCF4-228ENST00000565393 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.45□□□□□ -1.38
TCF4-228ENST00000565393 Q8N9G6 341 aaPredicted RBP6.45□□□□□ -1.38
TCF4-228ENST00000565393 KCTD6Q8NC69 237 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 PLA2G15Q8NCC3 412 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 ZNF248Q8NDW4 579 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 FAM46DQ8NEK8 389 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 OR56A4Q8NGH8 313 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 FNIP1Q8TF40 1166 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 NAT6Q93015 286 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 ATXN7L3BQ96GX2 97 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 BTBD6Q96KE9 485 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 WDR92Q96MX6 357 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 ZNF578Q96N58 590 aaPredicted RBP6.45□□□□□ -1.38
TCF4-228ENST00000565393 ZNF599Q96NL3 588 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 LGMNQ99538 433 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 CCDC3Q9BQI4 270 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 LRRC61Q9BV99 259 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 THAP2Q9H0W7 228 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 DPEP2Q9H4A9 486 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 SUDS3Q9H7L9 328 aaPredicted RBP6.45□□□□□ -1.38
TCF4-228ENST00000565393 CBX8Q9HC52 389 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.45□□□□□ -1.38
TCF4-228ENST00000565393 IP6K2Q9UHH9 426 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 PNMA8BQ9ULN7 279 aaPredicted RBP6.45□□□□□ -1.38
TCF4-228ENST00000565393 LUC7L2Q9Y383 392 aaKnown RBP6.45□□□□□ -1.38
TCF4-228ENST00000565393 U3KQA8 63 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 CKAP5Q14008 2032 aa6.45□□□□□ -1.38
TCF4-228ENST00000565393 CEP192Q8TEP8 1941 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 A0A087X0T9 212 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 A0A1W2PQ67 120 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 A0A1W2PQJ5 194 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 TSPAN11A1L157 253 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 GOLGA6CA6NDK9 693 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 GOLGA6BA6NDN3 693 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 TMEM202A6NGA9 273 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 PDE2AO00408 941 aaPredicted RBP6.44□□□□□ -1.38
TCF4-228ENST00000565393 TRAFD1O14545 582 aaPredicted RBP6.44□□□□□ -1.38
TCF4-228ENST00000565393 KLK10O43240 276 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 MAFKO60675 156 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 CELA2BP08218 269 aaPredicted RBP6.44□□□□□ -1.38
TCF4-228ENST00000565393 FAM228BP0C875 321 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 GOLGA6DP0CG33 693 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 KRT10P13645 584 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 TCF4P15884 667 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 KELP23276 732 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 NFKBIAP25963 317 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 IL1R2P27930 398 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 PCK1P35558 622 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 MMP12P39900 470 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms