RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 PIH1D1Q9NWS0 290 aaKnown RBP11.19□□□□□ -0.62
SF3B3-205ENST00000564899 C2orf42Q9NWW7 574 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 EVLQ9UI08 416 aaPredicted RBP11.19□□□□□ -0.62
SF3B3-205ENST00000564899 NDRG2Q9UN36 371 aaKnown RBP11.19□□□□□ -0.62
SF3B3-205ENST00000564899 SMG1Q96Q15 3661 aaKnown RBP11.19□□□□□ -0.62
SF3B3-205ENST00000564899 LOC400499M0QZD8 3231 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 DMXL2Q8TDJ6 3036 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.18□□□□□ -0.62
SF3B3-205ENST00000564899 AP3B1O00203 1094 aa11.18□□□□□ -0.62
SF3B3-205ENST00000564899 SLC30A4O14863 429 aa11.18□□□□□ -0.62
SF3B3-205ENST00000564899 AVILO75366 819 aa11.18□□□□□ -0.62
SF3B3-205ENST00000564899 BANF1O75531 89 aa11.18□□□□□ -0.62
SF3B3-205ENST00000564899 CPP00450 1065 aa11.18□□□□□ -0.62
SF3B3-205ENST00000564899 AGTP01019 485 aa11.18□□□□□ -0.62
SF3B3-205ENST00000564899 MAGEA3P43357 314 aa11.18□□□□□ -0.62
SF3B3-205ENST00000564899 MAGEA4P43358 317 aa11.18□□□□□ -0.62
SF3B3-205ENST00000564899 CCNHP51946 323 aaPredicted RBP11.18□□□□□ -0.62
SF3B3-205ENST00000564899 PMS2P54278 862 aa11.18□□□□□ -0.62
SF3B3-205ENST00000564899 CDK18Q07002 472 aa11.18□□□□□ -0.62
SF3B3-205ENST00000564899 CDH17Q12864 832 aa11.18□□□□□ -0.62
SF3B3-205ENST00000564899 ZNF234Q14588 700 aa11.18□□□□□ -0.62
SF3B3-205ENST00000564899 FASTKD3Q14CZ7 662 aaKnown RBP11.18□□□□□ -0.62
SF3B3-205ENST00000564899 ZBED8Q8IZ13 594 aa11.18□□□□□ -0.62
SF3B3-205ENST00000564899 SLC25A41Q8N5S1 370 aa11.18□□□□□ -0.62
SF3B3-205ENST00000564899 KDM1BQ8NB78 822 aa11.18□□□□□ -0.62
SF3B3-205ENST00000564899 FRS2Q8WU20 508 aa11.18□□□□□ -0.62
SF3B3-205ENST00000564899 FEM1CQ96JP0 617 aa11.18□□□□□ -0.62
SF3B3-205ENST00000564899 NSMCE3Q96MG7 304 aa11.18□□□□□ -0.62
SF3B3-205ENST00000564899 TDRD1Q9BXT4 1180 aaKnown RBP11.18□□□□□ -0.62
SF3B3-205ENST00000564899 TXLNGYQ9BZA5 131 aa11.18□□□□□ -0.62
SF3B3-205ENST00000564899 ATP13A3Q9H7F0 1226 aa11.18□□□□□ -0.62
SF3B3-205ENST00000564899 FBRSL1Q9HCM7 1045 aaKnown RBP11.18□□□□□ -0.62
SF3B3-205ENST00000564899 RXFP3Q9NSD7 469 aa11.18□□□□□ -0.62
SF3B3-205ENST00000564899 BFARQ9NZS9 450 aa11.18□□□□□ -0.62
SF3B3-205ENST00000564899 HECAQ9UBI9 543 aaPredicted RBP11.18□□□□□ -0.62
SF3B3-205ENST00000564899 RAI2Q9Y5P3 530 aa11.18□□□□□ -0.62
SF3B3-205ENST00000564899 PKD1L2Q7Z442 2459 aa11.18□□□□□ -0.62
SF3B3-205ENST00000564899 TICRRQ7Z2Z1 1910 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 KIAA1549LQ6ZVL6 1849 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 LOC285095A0A1B0GVY8 99 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 ALOX15BO15296 676 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 PIGNO95427 931 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 HLA-DPA1P20036 260 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 MGAT1P26572 445 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 GKP32189 559 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 TNFRSF4P43489 277 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 CHRNA4P43681 627 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 RPS9P46781 194 aaKnown RBP11.17□□□□□ -0.62
SF3B3-205ENST00000564899 SATB1Q01826 763 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 RAD51Q06609 339 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 BCL2L1Q07817 233 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 TRAF2Q12933 501 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 CBLBQ13191 982 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 COL9A2Q14055 689 aaPredicted RBP11.17□□□□□ -0.62
SF3B3-205ENST00000564899 PON2Q15165 354 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 E2F5Q15329 346 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 SLC1A5Q15758 541 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 MYLK3Q32MK0 819 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 HP1BP3Q5SSJ5 553 aaPredicted RBP11.17□□□□□ -0.62
SF3B3-205ENST00000564899 EGFLAMQ63HQ2 1017 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 DENND5AQ6IQ26 1287 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 SERPINA13PQ6UXR4 307 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 RANBP10Q6VN20 620 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 DPY19L3Q6ZPD9 716 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 PRR23BQ6ZRT6 265 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 RELL1Q8IUW5 271 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 ANKMY2Q8IV38 441 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 PLPP6Q8IY26 295 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 MREGQ8N565 214 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 ZNF366Q8N895 744 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 FBXO36Q8NEA4 188 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 OR2A12Q8NGT7 310 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 PYROXD1Q8WU10 500 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 LRRC39Q96DD0 335 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 C9orf72Q96LT7 481 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 TUBGCP5Q96RT8 1024 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 TRIB3Q96RU7 358 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 CDC42EP4Q9H3Q1 356 aaKnown RBP11.17□□□□□ -0.62
SF3B3-205ENST00000564899 ZDHHC6Q9H6R6 413 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 SEMA4GQ9NTN9 838 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 NINJ2Q9NZG7 142 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 THAP10Q9P2Z0 257 aaPredicted RBP11.17□□□□□ -0.62
SF3B3-205ENST00000564899 GMEB2Q9UKD1 530 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 CHMP2BQ9UQN3 213 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 CHKBQ9Y259 395 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 STARD13Q9Y3M8 1113 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 PCDHGC4Q9Y5F7 938 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 FREM2Q5SZK8 3169 aa11.17□□□□□ -0.62
SF3B3-205ENST00000564899 RALGAPA1Q6GYQ0 2036 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 EDDM13A0A1B0GTR0 161 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 SDR42E2A6NKP2 422 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 WASH3PC4AMC7 463 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 K7EQS6 105 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 HRO43593 1189 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 SOCS5O75159 536 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 POP4O95707 220 aaKnown RBP11.16□□□□□ -0.62
SF3B3-205ENST00000564899 NDST3O95803 873 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 EPOP01588 193 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 FGF1P05230 155 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 ATXN1LP0C7T5 689 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms