RNA–Protein interactions for RNA: ENST00000564815.5

COMMD4-211, Transcript of COMM domain containing 4, humanhuman

TSL 3 BASIC

Gene COMMD4, Length 639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-211ENST00000564815 SAMSN1Q9NSI8 373 aaKnown RBP14.34□□□□□ -0.11
COMMD4-211ENST00000564815 AKAP7Q9P0M2 348 aaPredicted RBP14.34□□□□□ -0.11
COMMD4-211ENST00000564815 ATXN7L1Q9ULK2 861 aaPredicted RBP14.34□□□□□ -0.11
COMMD4-211ENST00000564815 PCDHB11Q9Y5F2 797 aa14.34□□□□□ -0.11
COMMD4-211ENST00000564815 HEMK1Q9Y5R4 338 aaPredicted RBP14.34□□□□□ -0.11
COMMD4-211ENST00000564815 WASH4PA8MWX3 477 aa14.33□□□□□ -0.12
COMMD4-211ENST00000564815 CACNB4O00305 520 aaPredicted RBP14.33□□□□□ -0.12
COMMD4-211ENST00000564815 PDE2AO00408 941 aaPredicted RBP14.33□□□□□ -0.12
COMMD4-211ENST00000564815 RPLP0P05388 317 aaKnown RBP14.33□□□□□ -0.12
COMMD4-211ENST00000564815 CCDC172P0C7W6 258 aa14.33□□□□□ -0.12
COMMD4-211ENST00000564815 SFTPCP11686 197 aa14.33□□□□□ -0.12
COMMD4-211ENST00000564815 ITIH2P19823 946 aa14.33□□□□□ -0.12
COMMD4-211ENST00000564815 UGT1A5P35504 534 aa14.33□□□□□ -0.12
COMMD4-211ENST00000564815 ZNF143P52747 638 aaPredicted RBP14.33□□□□□ -0.12
COMMD4-211ENST00000564815 CCL7P80098 99 aa14.33□□□□□ -0.12
COMMD4-211ENST00000564815 MTM1Q13496 603 aa14.33□□□□□ -0.12
COMMD4-211ENST00000564815 ARHGEF7Q14155 803 aa14.33□□□□□ -0.12
COMMD4-211ENST00000564815 AGERQ15109 404 aa14.33□□□□□ -0.12
COMMD4-211ENST00000564815 ALG11Q2TAA5 492 aa14.33□□□□□ -0.12
COMMD4-211ENST00000564815 DPCR1Q3MIW9 517 aa14.33□□□□□ -0.12
COMMD4-211ENST00000564815 RAB6CQ53S08 254 aa14.33□□□□□ -0.12
COMMD4-211ENST00000564815 KIAA1614Q5VZ46 1190 aa14.33□□□□□ -0.12
COMMD4-211ENST00000564815 TAF8Q7Z7C8 310 aa14.33□□□□□ -0.12
COMMD4-211ENST00000564815 PHF13Q86YI8 300 aaPredicted RBP14.33□□□□□ -0.12
COMMD4-211ENST00000564815 UMODL1-AS1Q8N2C9 162 aa14.33□□□□□ -0.12
COMMD4-211ENST00000564815 ZSCAN1Q8NBB4 408 aa14.33□□□□□ -0.12
COMMD4-211ENST00000564815 C3orf20Q8ND61 904 aa14.33□□□□□ -0.12
COMMD4-211ENST00000564815 TUBGCP5Q96RT8 1024 aa14.33□□□□□ -0.12
COMMD4-211ENST00000564815 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.33□□□□□ -0.12
COMMD4-211ENST00000564815 MAGEB5Q9BZ81 275 aa14.33□□□□□ -0.12
COMMD4-211ENST00000564815 FAM117AQ9C073 453 aa14.33□□□□□ -0.12
COMMD4-211ENST00000564815 RAB6CQ9H0N0 254 aa14.33□□□□□ -0.12
COMMD4-211ENST00000564815 CLMPQ9H6B4 373 aa14.33□□□□□ -0.12
COMMD4-211ENST00000564815 PCDH12Q9NPG4 1184 aa14.33□□□□□ -0.12
COMMD4-211ENST00000564815 NLRC4Q9NPP4 1024 aa14.33□□□□□ -0.12
COMMD4-211ENST00000564815 FAM207AQ9NSI2 230 aaPredicted RBP14.33□□□□□ -0.12
COMMD4-211ENST00000564815 SEPT11Q9NVA2 429 aaKnown RBP14.33□□□□□ -0.12
COMMD4-211ENST00000564815 TAB2Q9NYJ8 693 aa14.33□□□□□ -0.12
COMMD4-211ENST00000564815 KALRNO60229 2985 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 MGAQ8IWI9 3026 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 ARHGAP42A6NI28 874 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 D6RAR5 112 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 NVLO15381 856 aaKnown RBP14.32□□□□□ -0.12
COMMD4-211ENST00000564815 SLC28A2O43868 658 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 UNGP13051 313 aaPredicted RBP14.32□□□□□ -0.12
COMMD4-211ENST00000564815 PNLIPP16233 465 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 GLB1P16278 677 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 CHRNB2P17787 502 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 CCKBRP32239 447 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 LIG3P49916 1009 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 NDST2P52849 883 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 GSCP56915 257 aaPredicted RBP14.32□□□□□ -0.12
COMMD4-211ENST00000564815 CYTH1Q15438 398 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 TSR1Q2NL82 804 aaKnown RBP14.32□□□□□ -0.12
COMMD4-211ENST00000564815 TMEM164Q5U3C3 297 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 DNAJC24Q6P3W2 148 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 DCUN1D2Q6PH85 259 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 KYQ8NBH2 561 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 FAM46DQ8NEK8 389 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 SGF29Q96ES7 293 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 CMKLR1Q99788 373 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 SEMA4CQ9C0C4 833 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 GANQ9H2C0 597 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 ATP13A3Q9H7F0 1226 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 APPL1Q9UKG1 709 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 PNMA8BQ9ULN7 279 aaPredicted RBP14.32□□□□□ -0.12
COMMD4-211ENST00000564815 ATP8A1Q9Y2Q0 1164 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 COQ6Q9Y2Z9 468 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 OR1A2Q9Y585 309 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 DGKBQ9Y6T7 804 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 ZNF462Q96JM2 2506 aa14.32□□□□□ -0.12
COMMD4-211ENST00000564815 EIF3CLB5ME19 914 aaKnown RBP14.31□□□□□ -0.12
COMMD4-211ENST00000564815 TNFRSF10CO14798 259 aa14.31□□□□□ -0.12
COMMD4-211ENST00000564815 INSIG1O15503 277 aa14.31□□□□□ -0.12
COMMD4-211ENST00000564815 DAPK3O43293 454 aa14.31□□□□□ -0.12
COMMD4-211ENST00000564815 PALMO75781 387 aa14.31□□□□□ -0.12
COMMD4-211ENST00000564815 PIGNO95427 931 aa14.31□□□□□ -0.12
COMMD4-211ENST00000564815 PCCBP05166 539 aa14.31□□□□□ -0.12
COMMD4-211ENST00000564815 HOXC4P09017 264 aaPredicted RBP14.31□□□□□ -0.12
COMMD4-211ENST00000564815 NFKBIAP25963 317 aa14.31□□□□□ -0.12
COMMD4-211ENST00000564815 SERPINA4P29622 427 aa14.31□□□□□ -0.12
COMMD4-211ENST00000564815 CSNK1DP48730 415 aa14.31□□□□□ -0.12
COMMD4-211ENST00000564815 TPI1P60174 286 aa14.31□□□□□ -0.12
COMMD4-211ENST00000564815 C1QBPQ07021 282 aaKnown RBP14.31□□□□□ -0.12
COMMD4-211ENST00000564815 CLEC16AQ2KHT3 1053 aa14.31□□□□□ -0.12
COMMD4-211ENST00000564815 KIF26BQ2KJY2 2108 aa14.31□□□□□ -0.12
COMMD4-211ENST00000564815 PPP1R2P3Q6NXS1 205 aa14.31□□□□□ -0.12
COMMD4-211ENST00000564815 OGFOD3Q6PK18 319 aa14.31□□□□□ -0.12
COMMD4-211ENST00000564815 CCNJLQ8IV13 435 aa14.31□□□□□ -0.12
COMMD4-211ENST00000564815 PYROXD2Q8N2H3 581 aa14.31□□□□□ -0.12
COMMD4-211ENST00000564815 Q8N9G6 341 aaPredicted RBP14.31□□□□□ -0.12
COMMD4-211ENST00000564815 NEK11Q8NG66 645 aa14.31□□□□□ -0.12
COMMD4-211ENST00000564815 OR56A4Q8NGH8 313 aa14.31□□□□□ -0.12
COMMD4-211ENST00000564815 ENOX1Q8TC92 643 aaKnown RBP14.31□□□□□ -0.12
COMMD4-211ENST00000564815 RBM15Q96T37 977 aaKnown RBP eCLIP14.31□□□□□ -0.12
COMMD4-211ENST00000564815 EIF3CQ99613 913 aaKnown RBP14.31□□□□□ -0.12
COMMD4-211ENST00000564815 CNPY3Q9BT09 278 aa14.31□□□□□ -0.12
COMMD4-211ENST00000564815 FOXP3Q9BZS1 431 aa14.31□□□□□ -0.12
COMMD4-211ENST00000564815 NUP62CLQ9H1M0 184 aa14.31□□□□□ -0.12
COMMD4-211ENST00000564815 NOL6Q9H6R4 1146 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms