RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 RHOT1Q8IXI2 618 aa18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 SLC22A18ASQ8N1D0 253 aa18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 CHCHD4Q8N4Q1 142 aa18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 PQLC3Q8N755 202 aa18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 PNPLA1Q8N8W4 532 aa18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 PDCD6IPQ8WUM4 868 aaKnown RBP18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 ECHDC3Q96DC8 303 aa18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 IFT43Q96FT9 208 aa18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 NOD2Q9HC29 1040 aa18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 NT5MQ9NPB1 228 aa18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 HAUS2Q9NVX0 235 aa18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 DDX56Q9NY93 547 aaKnown RBP18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 COQ6Q9Y2Z9 468 aa18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 PCDHGC4Q9Y5F7 938 aa18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 ANKRD11Q6UB99 2663 aaPredicted RBP18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 COL5A1P20908 1838 aaPredicted RBP18.47■□□□□ 0.55
SYNGR3-204ENST00000564642 ZNF487B1APH4 448 aa18.47■□□□□ 0.55
SYNGR3-204ENST00000564642 TRAFD1O14545 582 aaPredicted RBP18.47■□□□□ 0.55
SYNGR3-204ENST00000564642 MATN3O15232 486 aa18.47■□□□□ 0.55
SYNGR3-204ENST00000564642 LZTS3O60299 673 aaPredicted RBP18.47■□□□□ 0.55
SYNGR3-204ENST00000564642 IPO7O95373 1038 aaKnown RBP18.47■□□□□ 0.55
SYNGR3-204ENST00000564642 KRT1P04264 644 aa18.47■□□□□ 0.55
SYNGR3-204ENST00000564642 PRKCGP05129 697 aa18.47■□□□□ 0.55
SYNGR3-204ENST00000564642 CR2P20023 1033 aa18.47■□□□□ 0.55
SYNGR3-204ENST00000564642 COMTP21964 271 aa18.47■□□□□ 0.55
SYNGR3-204ENST00000564642 LIG3P49916 1009 aa18.47■□□□□ 0.55
SYNGR3-204ENST00000564642 SEMG2Q02383 582 aa18.47■□□□□ 0.55
SYNGR3-204ENST00000564642 PDE1CQ14123 709 aaPredicted RBP18.47■□□□□ 0.55
SYNGR3-204ENST00000564642 PTK2BQ14289 1009 aa18.47■□□□□ 0.55
SYNGR3-204ENST00000564642 HS1BP3Q53T59 392 aa18.47■□□□□ 0.55
SYNGR3-204ENST00000564642 VSIG1Q86XK7 387 aa18.47■□□□□ 0.55
SYNGR3-204ENST00000564642 TEX26Q8N6G2 289 aa18.47■□□□□ 0.55
SYNGR3-204ENST00000564642 CCNYQ8ND76 341 aa18.47■□□□□ 0.55
SYNGR3-204ENST00000564642 ADAMTS14Q8WXS8 1223 aa18.47■□□□□ 0.55
SYNGR3-204ENST00000564642 CNDP2Q96KP4 475 aaKnown RBP18.47■□□□□ 0.55
SYNGR3-204ENST00000564642 ZNF830Q96NB3 372 aaPredicted RBP18.47■□□□□ 0.55
SYNGR3-204ENST00000564642 TSGA13Q96PP4 275 aa18.47■□□□□ 0.55
SYNGR3-204ENST00000564642 DNAJC28Q9NX36 388 aa18.47■□□□□ 0.55
SYNGR3-204ENST00000564642 WASF3Q9UPY6 502 aa18.47■□□□□ 0.55
SYNGR3-204ENST00000564642 HYOU1Q9Y4L1 999 aa18.47■□□□□ 0.55
SYNGR3-204ENST00000564642 SPTY2D1-AS1A0A0U1RR47 76 aa18.46■□□□□ 0.55
SYNGR3-204ENST00000564642 TOR1BO14657 336 aa18.46■□□□□ 0.55
SYNGR3-204ENST00000564642 SOCS5O75159 536 aa18.46■□□□□ 0.55
SYNGR3-204ENST00000564642 C6P13671 934 aa18.46■□□□□ 0.55
SYNGR3-204ENST00000564642 DGKAP23743 735 aa18.46■□□□□ 0.55
SYNGR3-204ENST00000564642 NFKBIAP25963 317 aa18.46■□□□□ 0.55
SYNGR3-204ENST00000564642 IGFALSP35858 605 aa18.46■□□□□ 0.55
SYNGR3-204ENST00000564642 MMP12P39900 470 aa18.46■□□□□ 0.55
SYNGR3-204ENST00000564642 THOP1P52888 689 aa18.46■□□□□ 0.55
SYNGR3-204ENST00000564642 HADHBP55084 474 aaKnown RBP18.46■□□□□ 0.55
SYNGR3-204ENST00000564642 PFN3P60673 137 aa18.46■□□□□ 0.55
SYNGR3-204ENST00000564642 YPEL5P62699 121 aa18.46■□□□□ 0.55
SYNGR3-204ENST00000564642 GBE1Q04446 702 aa18.46■□□□□ 0.55
SYNGR3-204ENST00000564642 FZD2Q14332 565 aa18.46■□□□□ 0.55
SYNGR3-204ENST00000564642 LRRC14Q15048 493 aa18.46■□□□□ 0.55
SYNGR3-204ENST00000564642 ZNF542PQ5EBM4 170 aa18.46■□□□□ 0.55
SYNGR3-204ENST00000564642 RAB44Q7Z6P3 723 aaPredicted RBP18.46■□□□□ 0.55
SYNGR3-204ENST00000564642 PARGQ86W56 976 aa18.46■□□□□ 0.55
SYNGR3-204ENST00000564642 TP53I13Q8NBR0 393 aaPredicted RBP18.46■□□□□ 0.55
SYNGR3-204ENST00000564642 RNF25Q96BH1 459 aaPredicted RBP18.46■□□□□ 0.55
SYNGR3-204ENST00000564642 NSMCE3Q96MG7 304 aa18.46■□□□□ 0.55
SYNGR3-204ENST00000564642 POLR1EQ9GZS1 481 aaKnown RBP18.46■□□□□ 0.55
SYNGR3-204ENST00000564642 MBNL1Q9NR56 388 aaKnown RBP18.46■□□□□ 0.55
SYNGR3-204ENST00000564642 GPR27Q9NS67 375 aa18.46■□□□□ 0.55
SYNGR3-204ENST00000564642 RBM22Q9NW64 420 aaKnown RBP eCLIP18.46■□□□□ 0.55
SYNGR3-204ENST00000564642 EPN1Q9Y6I3 576 aaPredicted RBP18.46■□□□□ 0.55
SYNGR3-204ENST00000564642 CFAP69A5D8W1 941 aa18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 SOWAHDA6NJG2 315 aa18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 C3orf70A6NLC5 250 aaPredicted RBP18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 A8MX80 341 aa18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 H3BM21 787 aa18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 ENC1O14682 589 aa18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 APOL1O14791 398 aa18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 HTRA2O43464 458 aaPredicted RBP18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 NDUFA10O95299 355 aa18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 CPP00450 1065 aa18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 ELFN1P0C7U0 828 aa18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 CCNB1P14635 433 aa18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 ZFXP17010 805 aaPredicted RBP18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 HNRNPKP61978 463 aaKnown RBP eCLIP18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 SLC10A2Q12908 348 aaPredicted RBP18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 CCDC157Q569K6 752 aa18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 KANSL1Q7Z3B3 1105 aa18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 RFX6Q8HWS3 928 aa18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 MAML1Q92585 1016 aa18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 FATE1Q969F0 183 aa18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 HDAC11Q96DB2 347 aa18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 SEMA3CQ99985 751 aa18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 TOR4AQ9NXH8 423 aa18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 DTLQ9NZJ0 730 aa18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 AMACRQ9UHK6 382 aa18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 PHTF1Q9UMS5 762 aa18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 TTLL3Q9Y4R7 772 aa18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 NEUROG3Q9Y4Z2 214 aa18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 HEY1Q9Y5J3 304 aa18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 ALG6Q9Y672 507 aa18.45■□□□□ 0.54
SYNGR3-204ENST00000564642 A0A0A6YYK5 440 aaPredicted RBP18.44■□□□□ 0.54
SYNGR3-204ENST00000564642 NEMP2A6NFY4 417 aa18.44■□□□□ 0.54
SYNGR3-204ENST00000564642 PIAS2O75928 621 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms