RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 DNMT3LQ9UJW3 386 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 CA14Q9ULX7 337 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 DUSP12Q9UNI6 340 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 SLC12A4Q9UP95 1085 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 CCL26Q9Y258 94 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 CPQQ9Y646 472 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 MYOFQ9NZM1 2061 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 MAP1BP46821 2468 aaKnown RBP7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 HMX2A2RU54 273 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 DRGXA6NNA5 263 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 LEFTY2O00292 366 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 COCHO43405 550 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 ACSL4O60488 711 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 PMPCBO75439 489 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 CNTN5O94779 1100 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 UBOX5O94941 541 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 TBX18O95935 607 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 ALDOAP04075 364 aaKnown RBP7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 SRFP11831 508 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 PSMC3P17980 439 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 TYK2P29597 1187 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 ADRA1AP35348 466 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 SLC11A2P49281 568 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 TMPRSS15P98073 1019 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 IL10RBQ08334 325 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 USP4Q13107 963 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 HNRNPDQ14103 355 aaKnown RBP7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 SEPT6Q14141 434 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 ZNF235Q14590 738 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 POLD3Q15054 466 aaPredicted RBP7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 SMAD1Q15797 465 aaKnown RBP7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 INSCQ1MX18 579 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 TTC31Q49AM3 519 aaPredicted RBP7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 ALFQ53S48 1182 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 FAM133BQ5BKY9 247 aaKnown RBP7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 ARTNQ5T4W7 220 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 TMCO4Q5TGY1 634 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 MARC1Q5VT66 337 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 PKN3Q6P5Z2 889 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 KLHDC10Q6PID8 442 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 CDHR3Q6ZTQ4 885 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 STRA8Q7Z7C7 330 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 NUDCD3Q8IVD9 361 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 MFSD6LQ8IWD5 586 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 UBALD2Q8IYN6 164 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 LGI2Q8N0V4 545 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 BBS5Q8N3I7 341 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 SPATA22Q8NHS9 363 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 TTC8Q8TAM2 541 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 SH3RF2Q8TEC5 729 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 C10orf82Q8WW14 230 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 IGSF8Q969P0 613 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 ZFYVE19Q96K21 471 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 RMDN2Q96LZ7 410 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 TSNARE1Q96NA8 513 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 FCRL3Q96P31 734 aaPredicted RBP7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 FAM167BQ9BTA0 163 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 TRMT61BQ9BVS5 477 aaKnown RBP7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 SLC13A1Q9BZW2 595 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 RNF38Q9H0F5 515 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 C12orf65Q9H3J6 166 aaKnown RBP7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 NOL6Q9H6R4 1146 aaKnown RBP7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 TRPV4Q9HBA0 871 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 NPHS2Q9NP85 383 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 NT5MQ9NPB1 228 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 SNX15Q9NRS6 342 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 TXLNGQ9NUQ3 528 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 NDFIP2Q9NV92 336 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 THG1LQ9NWX6 298 aaKnown RBP7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 CFAP97Q9P2B7 532 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 DCDC2Q9UHG0 476 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 MID2Q9UJV3 735 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 TCAF1Q9Y4C2 921 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 PSAT1Q9Y617 370 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 F5P12259 2224 aa7.5□□□□□ -1.21
MAP1LC3B-205ENST00000564638 EP300Q09472 2414 aaPredicted RBP7.49□□□□□ -1.21
MAP1LC3B-205ENST00000564638 HEATR9A2RTY3 570 aa7.49□□□□□ -1.21
MAP1LC3B-205ENST00000564638 CFAP73A6NFT4 308 aa7.49□□□□□ -1.21
MAP1LC3B-205ENST00000564638 SOBPA7XYQ1 873 aa7.49□□□□□ -1.21
MAP1LC3B-205ENST00000564638 STK25O00506 426 aa7.49□□□□□ -1.21
MAP1LC3B-205ENST00000564638 TGDSO95455 350 aa7.49□□□□□ -1.21
MAP1LC3B-205ENST00000564638 MT-CYBP00156 380 aaPredicted RBP7.49□□□□□ -1.21
MAP1LC3B-205ENST00000564638 MPOP05164 745 aa7.49□□□□□ -1.21
MAP1LC3B-205ENST00000564638 BPGMP07738 259 aa7.49□□□□□ -1.21
MAP1LC3B-205ENST00000564638 TPH1P17752 444 aa7.49□□□□□ -1.21
MAP1LC3B-205ENST00000564638 PFKLP17858 780 aa7.49□□□□□ -1.21
MAP1LC3B-205ENST00000564638 NMBRP28336 390 aa7.49□□□□□ -1.21
MAP1LC3B-205ENST00000564638 WEE1P30291 646 aa7.49□□□□□ -1.21
MAP1LC3B-205ENST00000564638 OR1E1P30953 314 aa7.49□□□□□ -1.21
MAP1LC3B-205ENST00000564638 MAGEA12P43365 314 aa7.49□□□□□ -1.21
MAP1LC3B-205ENST00000564638 HARS2P49590 506 aaKnown RBP7.49□□□□□ -1.21
MAP1LC3B-205ENST00000564638 WNT3AP56704 352 aa7.49□□□□□ -1.21
MAP1LC3B-205ENST00000564638 SLC7A9P82251 487 aa7.49□□□□□ -1.21
MAP1LC3B-205ENST00000564638 TNK2Q07912 1038 aa7.49□□□□□ -1.21
MAP1LC3B-205ENST00000564638 ITKQ08881 620 aa7.49□□□□□ -1.21
MAP1LC3B-205ENST00000564638 SERINC3Q13530 473 aa7.49□□□□□ -1.21
MAP1LC3B-205ENST00000564638 THOC5Q13769 683 aaKnown RBP7.49□□□□□ -1.21
MAP1LC3B-205ENST00000564638 PDE1CQ14123 709 aaPredicted RBP7.49□□□□□ -1.21
MAP1LC3B-205ENST00000564638 POU6F1Q14863 301 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms