RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 TMEM163Q8TC26 289 aa2.59□□□□□ -1.99
SUB1P3-201ENST00000564581 CSGALNACT1Q8TDX6 532 aa2.59□□□□□ -1.99
SUB1P3-201ENST00000564581 CPT1BQ92523 772 aa2.59□□□□□ -1.99
SUB1P3-201ENST00000564581 EID2BQ96D98 161 aa2.59□□□□□ -1.99
SUB1P3-201ENST00000564581 SCMH1Q96GD3 660 aa2.59□□□□□ -1.99
SUB1P3-201ENST00000564581 MVB12BQ9H7P6 319 aa2.59□□□□□ -1.99
SUB1P3-201ENST00000564581 PLEKHA2Q9HB19 425 aa2.59□□□□□ -1.99
SUB1P3-201ENST00000564581 WDR6Q9NNW5 1121 aaKnown RBP2.59□□□□□ -1.99
SUB1P3-201ENST00000564581 HERC5Q9UII4 1024 aaKnown RBP2.59□□□□□ -1.99
SUB1P3-201ENST00000564581 BAG5Q9UL15 447 aa2.59□□□□□ -1.99
SUB1P3-201ENST00000564581 CHD8Q9HCK8 2581 aa2.59□□□□□ -1.99
SUB1P3-201ENST00000564581 TNRC6CQ9HCJ0 1690 aaKnown RBP2.59□□□□□ -2
SUB1P3-201ENST00000564581 MUC6Q6W4X9 2439 aa2.59□□□□□ -2
SUB1P3-201ENST00000564581 ZFYVE9O95405 1425 aa2.59□□□□□ -2
SUB1P3-201ENST00000564581 ADAMTS13Q76LX8 1427 aa2.59□□□□□ -2
SUB1P3-201ENST00000564581 RRBP1Q9P2E9 1410 aaKnown RBP2.59□□□□□ -2
SUB1P3-201ENST00000564581 ARFGEF1Q9Y6D6 1849 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 PXDNQ92626 1479 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 DICER1Q9UPY3 1922 aaKnown RBP2.58□□□□□ -2
SUB1P3-201ENST00000564581 TPRP12270 2363 aaKnown RBP2.58□□□□□ -2
SUB1P3-201ENST00000564581 IGLV5-37A0A075B6J1 123 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 A0A087WV62 115 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 TMEM247A6NEH6 219 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 CLGNO14967 610 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 SLC25A17O43808 307 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 KRT38O76015 456 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 CGAP01215 116 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 CSF1P09603 554 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 TSPY4P0CV99 314 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 TSPY10P0CW01 314 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 SERPINB3P29508 390 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 SKIV2L2P42285 1042 aaKnown RBP2.58□□□□□ -2
SUB1P3-201ENST00000564581 CDK7P50613 346 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 RPS6KA3P51812 740 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 LBX1P52954 281 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 ACSM2AQ08AH3 577 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 ST3GAL1Q11201 340 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 DLG1Q12959 904 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 FBXO43Q4G163 708 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 SETMARQ53H47 684 aaPredicted RBP2.58□□□□□ -2
SUB1P3-201ENST00000564581 CCDC181Q5TID7 509 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 DGAT2L7PQ6IED9 249 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 DSTYKQ6XUX3 929 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 SMIM29Q86T20 159 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 PTGR2Q8N8N7 351 aaPredicted RBP2.58□□□□□ -2
SUB1P3-201ENST00000564581 IL17FQ96PD4 163 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 TRAPPC9Q96Q05 1148 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 TEFMQ96QE5 360 aaKnown RBP2.58□□□□□ -2
SUB1P3-201ENST00000564581 ARNT2Q9HBZ2 717 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 TMEM51Q9NW97 253 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 LRFN1Q9P244 771 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 PARP4Q9UKK3 1724 aaKnown RBP2.58□□□□□ -2
SUB1P3-201ENST00000564581 AKAP12Q02952 1782 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 KIF15Q9NS87 1388 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 PTPRZ1P23471 2315 aaPredicted RBP2.58□□□□□ -2
SUB1P3-201ENST00000564581 PXDNLA1KZ92 1463 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 MBD5Q9P267 1494 aa2.58□□□□□ -2
SUB1P3-201ENST00000564581 TOPAZ1Q8N9V7 1692 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 ZNF318Q5VUA4 2279 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 TRPM7Q96QT4 1865 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.57□□□□□ -2
SUB1P3-201ENST00000564581 FAM157AC9JC47 383 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 CHL1O00533 1208 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 HNRNPRO43390 633 aaKnown RBP2.57□□□□□ -2
SUB1P3-201ENST00000564581 KRT18P05783 430 aaKnown RBP2.57□□□□□ -2
SUB1P3-201ENST00000564581 MMP3P08254 477 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 DAOP14920 347 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 HMGB2P26583 209 aaKnown RBP2.57□□□□□ -2
SUB1P3-201ENST00000564581 DCTDP32321 178 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 SERPINF1P36955 418 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 RPL3P39023 403 aaKnown RBP2.57□□□□□ -2
SUB1P3-201ENST00000564581 MTNR1AP48039 350 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 MAP2K1Q02750 393 aaPredicted RBP2.57□□□□□ -2
SUB1P3-201ENST00000564581 HDAC1Q13547 482 aaPredicted RBP2.57□□□□□ -2
SUB1P3-201ENST00000564581 BYSLQ13895 437 aaKnown RBP2.57□□□□□ -2
SUB1P3-201ENST00000564581 IL13RA2Q14627 380 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 SH2D4BQ5SQS7 431 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 STPG1Q5TH74 334 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 AADACL2Q6P093 401 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 OR4N2Q8NGD1 307 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 RFWD2Q8NHY2 731 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 TBC1D22AQ8WUA7 517 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 SORCS1Q8WY21 1168 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 CSF3RQ99062 836 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 EPYCQ99645 322 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 ARFGAP3Q9NP61 516 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 NLRC4Q9NPP4 1024 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 CHST12Q9NRB3 414 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 GRHL1Q9NZI5 618 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 NDUFAF4Q9P032 175 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 HDAC6Q9UBN7 1215 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 DHDHQ9UQ10 334 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 SLC45A1Q9Y2W3 748 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 PTPRUQ92729 1446 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 RIMS2Q9UQ26 1411 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 COL6A3P12111 3177 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 GCC2Q8IWJ2 1684 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 ADAMTS7Q9UKP4 1686 aa2.57□□□□□ -2
SUB1P3-201ENST00000564581 SPTBN4Q9H254 2564 aa2.56□□□□□ -2
SUB1P3-201ENST00000564581 PEAK1Q9H792 1746 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms