RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 PABPC5Q96DU9 382 aaKnown RBP11.89□□□□□ -0.51
ABCA3-203ENST00000563623 VPS50Q96JG6 964 aa11.89□□□□□ -0.51
ABCA3-203ENST00000563623 TCF12Q99081 682 aa11.89□□□□□ -0.51
ABCA3-203ENST00000563623 C1QTNF1Q9BXJ1 281 aa11.89□□□□□ -0.51
ABCA3-203ENST00000563623 POLR1BQ9H9Y6 1135 aa11.89□□□□□ -0.51
ABCA3-203ENST00000563623 TSR3Q9UJK0 312 aaKnown RBP11.89□□□□□ -0.51
ABCA3-203ENST00000563623 GJD2Q9UKL4 321 aa11.89□□□□□ -0.51
ABCA3-203ENST00000563623 A0A087WXM4 84 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 MYBPHLA2RUH7 354 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 GFAPP14136 432 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 NFKBIAP25963 317 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 SLC7A1P30825 629 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 IREB2P48200 963 aaKnown RBP11.88□□□□□ -0.51
ABCA3-203ENST00000563623 CXCR3P49682 368 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 CCR3P51677 355 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 SLC5A3P53794 718 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 ZIK1Q3SY52 487 aaPredicted RBP11.88□□□□□ -0.51
ABCA3-203ENST00000563623 SCIMPQ6UWF3 145 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 NCCRP1Q6ZVX7 275 aaPredicted RBP11.88□□□□□ -0.51
ABCA3-203ENST00000563623 GPRIN1Q7Z2K8 1008 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 ERI1Q8IV48 349 aaKnown RBP11.88□□□□□ -0.51
ABCA3-203ENST00000563623 CHERPQ8IWX8 916 aaKnown RBP11.88□□□□□ -0.51
ABCA3-203ENST00000563623 GIPC3Q8TF64 312 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 FBXW11Q9UKB1 542 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 CDC14AQ9UNH5 594 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 ZNF510Q9Y2H8 683 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 SH3GLB1Q9Y371 365 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 RGPD3A6NKT7 1758 aaPredicted RBP11.88□□□□□ -0.51
ABCA3-203ENST00000563623 RGPD4Q7Z3J3 1758 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 A8MT66 165 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 H3BNH8 94 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 IPO13O94829 963 aaKnown RBP11.88□□□□□ -0.51
ABCA3-203ENST00000563623 PIM1P11309 404 aaPredicted RBP11.88□□□□□ -0.51
ABCA3-203ENST00000563623 CHRM3P20309 590 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 PSMA4P25789 261 aaKnown RBP11.88□□□□□ -0.51
ABCA3-203ENST00000563623 NUP107P57740 925 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 ATP1A4Q13733 1029 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 CYP51A1Q16850 503 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 MAGEE2Q8TD90 523 aaPredicted RBP11.88□□□□□ -0.51
ABCA3-203ENST00000563623 HNRNPABQ99729 332 aaKnown RBP11.88□□□□□ -0.51
ABCA3-203ENST00000563623 RBM38Q9H0Z9 239 aaKnown RBP11.88□□□□□ -0.51
ABCA3-203ENST00000563623 TNFRSF12AQ9NP84 129 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 MID1IP1Q9NPA3 183 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 SUCOQ9UBS9 1254 aaKnown RBP11.88□□□□□ -0.51
ABCA3-203ENST00000563623 CLEC11AQ9Y240 323 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 COMMD10Q9Y6G5 202 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 DHRS12A0PJE2 317 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 FBP2O00757 339 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 BAIAP3O94812 1187 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 CES1P23141 567 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 FASP25445 335 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 PNPLA4P41247 253 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 CDK9P50750 372 aaKnown RBP11.88□□□□□ -0.51
ABCA3-203ENST00000563623 DAOAP59103 153 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 NAA20P61599 178 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 APOFQ13790 326 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 GPR158Q5T848 1215 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 BTBD8Q5XKL5 378 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 PATL1Q86TB9 770 aaKnown RBP11.88□□□□□ -0.51
ABCA3-203ENST00000563623 FAM35AQ86V20 835 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 FIBCD1Q8N539 461 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 OR2T34Q8NGX1 318 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 OR2T3Q8NH03 318 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 FAR2Q96K12 515 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 VAT1Q99536 393 aa11.88□□□□□ -0.51
ABCA3-203ENST00000563623 A0A0J9YYE9 177 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 TTC24A2A3L6 582 aaPredicted RBP11.87□□□□□ -0.51
ABCA3-203ENST00000563623 I6L893 689 aaPredicted RBP11.87□□□□□ -0.51
ABCA3-203ENST00000563623 SLC22A2O15244 555 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 PSMD3O43242 534 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 NPHS1O60500 1241 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 LTA4HP09960 611 aaKnown RBP11.87□□□□□ -0.51
ABCA3-203ENST00000563623 NCK1P16333 377 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 ATP6V1B2P21281 511 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 HK2P52789 917 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 GEMP55040 296 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 NSUN2Q08J23 767 aaKnown RBP eCLIP11.87□□□□□ -0.51
ABCA3-203ENST00000563623 CBLBQ13191 982 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 TSTD2Q5T7W7 516 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 XKR5Q6UX68 686 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 TICAM1Q8IUC6 712 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 MFSD6LQ8IWD5 586 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 CPNE9Q8IYJ1 553 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 HASPINQ8TF76 798 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 FBXL20Q96IG2 436 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 LRCH3Q96II8 777 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 SENP8Q96LD8 212 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 TRIM15Q9C019 465 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 OSBPL2Q9H1P3 480 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 ZNF408Q9H9D4 720 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 GLOD4Q9HC38 313 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 NT5MQ9NPB1 228 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 TBC1D23Q9NUY8 699 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 MPP6Q9NZW5 540 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 SLC8A2Q9UPR5 921 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 OR51F1A6NGY5 319 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 BOLA2-SMG1P6H3BVE0 249 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 MTHFD1P11586 935 aaKnown RBP11.87□□□□□ -0.51
ABCA3-203ENST00000563623 COL6A2P12110 1019 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 SCNN1AP37088 669 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms