RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 SSR1P43307 286 aaKnown RBP4.79□□□□□ -1.64
CDR2-203ENST00000563573 KIR2DL3P43628 341 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 TKTL1P51854 596 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 GSCP56915 257 aaPredicted RBP4.79□□□□□ -1.64
CDR2-203ENST00000563573 ERVK-21P61565 698 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 YWHAZP63104 245 aaKnown RBP4.79□□□□□ -1.64
CDR2-203ENST00000563573 ADAM8P78325 824 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 MRPS5P82675 430 aaKnown RBP4.79□□□□□ -1.64
CDR2-203ENST00000563573 ROR1Q01973 937 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 ADIGQ0VDE8 80 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 PTP4A2Q12974 167 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 PLD1Q13393 1074 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 MAMLD1Q13495 774 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 ZNF460Q14592 562 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 VEPH1Q14D04 833 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 RPS6KA1Q15418 735 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 CLUL1Q15846 466 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 PTPN20Q4JDL3 420 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 C2CD6Q53TS8 623 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 RAB41Q5JT25 222 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 PIK3R6Q5UE93 754 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 PM20D1Q6GTS8 502 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 CCDC149Q6ZUS6 474 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 DENND5BQ6ZUT9 1274 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 FAM183BPQ6ZVS7 135 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 HTR3DQ70Z44 454 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 RTL10Q7L3V2 364 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 ARCQ7LC44 396 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 ITIH5Q86UX2 942 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 PIGZQ86VD9 579 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 MON1AQ86VX9 555 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 TMEM173Q86WV6 379 aaPredicted RBP4.79□□□□□ -1.64
CDR2-203ENST00000563573 KIF18BQ86Y91 864 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 RNF168Q8IYW5 571 aaPredicted RBP4.79□□□□□ -1.64
CDR2-203ENST00000563573 TDHQ8IZJ6 230 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 CMTM4Q8IZR5 234 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 SCML4Q8N228 414 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 ELMOD1Q8N336 334 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 ARHGAP18Q8N392 663 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 MRPL43Q8N983 215 aaKnown RBP4.79□□□□□ -1.64
CDR2-203ENST00000563573 SPPL3Q8TCT6 385 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 FAM149B1Q96BN6 582 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 ARHGEF26Q96DR7 871 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 PBKQ96KB5 322 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 SPATA17Q96L03 361 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 B3GALT6Q96L58 329 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 PGLYRP2Q96PD5 576 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 PKMYT1Q99640 499 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 SMOQ99835 787 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 CLSTN3Q9BQT9 956 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 C17orf80Q9BSJ5 609 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 PITHD1Q9GZP4 211 aaPredicted RBP4.79□□□□□ -1.64
CDR2-203ENST00000563573 LMAN2LQ9H0V9 348 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 ZBP1Q9H171 429 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 CYP4F11Q9HBI6 524 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 POPDC2Q9HBU9 364 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 ALG13Q9NP73 1137 aaKnown RBP4.79□□□□□ -1.64
CDR2-203ENST00000563573 SLC2A4RGQ9NR83 387 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 ABCC13Q9NSE7 274 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 INTS7Q9NVH2 962 aaKnown RBP4.79□□□□□ -1.64
CDR2-203ENST00000563573 TMLHEQ9NVH6 421 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 RRN3Q9NYV6 651 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.79□□□□□ -1.64
CDR2-203ENST00000563573 UXTQ9UBK9 157 aaPredicted RBP4.79□□□□□ -1.64
CDR2-203ENST00000563573 CYTH4Q9UIA0 394 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 MTUS1Q9ULD2 1270 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 PLAAQ9Y263 795 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 ASB3Q9Y575 518 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 SPO11Q9Y5K1 396 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 TNPO3Q9Y5L0 923 aaKnown RBP4.79□□□□□ -1.64
CDR2-203ENST00000563573 SAR1BQ9Y6B6 198 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 COL4A6Q14031 1691 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 MYO16Q9Y6X6 1858 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 PATJQ8NI35 1801 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 A0A0A6YYJ9 748 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 A0A0U1RQJ8 604 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 WDR27A2RRH5 827 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 LCHNA4D1U4 455 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 GRID2IPA4D2P6 1211 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 SLC38A8A6NNN8 435 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 CBX4O00257 560 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 TEX28O15482 410 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 PAPSS1O43252 624 aaPredicted RBP4.78□□□□□ -1.64
CDR2-203ENST00000563573 HSF2BPO75031 334 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 GRAP2O75791 330 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 GLUD1P00367 558 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 ERBB2P04626 1255 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 CA3P07451 260 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 CNPP09543 421 aaKnown RBP4.78□□□□□ -1.64
CDR2-203ENST00000563573 CSH1P0DML2 217 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 CSH2P0DML3 217 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 RALAP11233 206 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 MYOGP15173 224 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 TCP1P17987 556 aaKnown RBP4.78□□□□□ -1.64
CDR2-203ENST00000563573 PSMA2P25787 234 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 YWHAQP27348 245 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 MAN1A1P33908 653 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 MATKP42679 507 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 PPP3CCP48454 512 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 DAOAP59103 153 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms