RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 FBXO4Q9UKT5 387 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 PCNTO95613 3336 aa5.25□□□□□ -1.57
LINC00254-201ENST00000563416 MYH8P13535 1937 aa5.25□□□□□ -1.57
LINC00254-201ENST00000563416 TMEM247A6NEH6 219 aa5.25□□□□□ -1.57
LINC00254-201ENST00000563416 INSIG1O15503 277 aa5.25□□□□□ -1.57
LINC00254-201ENST00000563416 ATG13O75143 517 aa5.25□□□□□ -1.57
LINC00254-201ENST00000563416 NEURL1O76050 574 aa5.25□□□□□ -1.57
LINC00254-201ENST00000563416 TOMM70O94826 608 aa5.25□□□□□ -1.57
LINC00254-201ENST00000563416 TOMM40O96008 361 aa5.25□□□□□ -1.57
LINC00254-201ENST00000563416 LDHCP07864 332 aa5.25□□□□□ -1.57
LINC00254-201ENST00000563416 UBTFL1P0CB47 393 aaPredicted RBP5.25□□□□□ -1.57
LINC00254-201ENST00000563416 PKMP14618 531 aaKnown RBP5.25□□□□□ -1.57
LINC00254-201ENST00000563416 PRPH2P23942 346 aa5.25□□□□□ -1.57
LINC00254-201ENST00000563416 RFX5P48382 616 aaPredicted RBP5.25□□□□□ -1.57
LINC00254-201ENST00000563416 RHAGQ02094 409 aa5.25□□□□□ -1.57
LINC00254-201ENST00000563416 CHRNDQ07001 517 aa5.25□□□□□ -1.57
LINC00254-201ENST00000563416 CXCL9Q07325 125 aa5.25□□□□□ -1.57
LINC00254-201ENST00000563416 PTGR1Q14914 329 aa5.25□□□□□ -1.57
LINC00254-201ENST00000563416 SLC30A9Q6PML9 568 aa5.25□□□□□ -1.57
LINC00254-201ENST00000563416 KIAA1324Q6UXG2 1013 aaKnown RBP5.25□□□□□ -1.57
LINC00254-201ENST00000563416 C15orf52Q6ZUT6 534 aaKnown RBP5.25□□□□□ -1.57
LINC00254-201ENST00000563416 GALNT15Q8N3T1 639 aa5.25□□□□□ -1.57
LINC00254-201ENST00000563416 TMEM57Q8N5G2 664 aa5.25□□□□□ -1.57
LINC00254-201ENST00000563416 KCNJ9Q92806 393 aa5.25□□□□□ -1.57
LINC00254-201ENST00000563416 FRAT1Q92837 279 aaPredicted RBP5.25□□□□□ -1.57
LINC00254-201ENST00000563416 MSI2Q96DH6 328 aaKnown RBP5.25□□□□□ -1.57
LINC00254-201ENST00000563416 ZNF419Q96HQ0 510 aaPredicted RBP5.25□□□□□ -1.57
LINC00254-201ENST00000563416 SPAG4Q9NPE6 437 aa5.25□□□□□ -1.57
LINC00254-201ENST00000563416 RNF146Q9NTX7 359 aa5.25□□□□□ -1.57
LINC00254-201ENST00000563416 PDP2Q9P2J9 529 aa5.25□□□□□ -1.57
LINC00254-201ENST00000563416 ATAD5Q96QE3 1844 aa5.25□□□□□ -1.57
LINC00254-201ENST00000563416 TTC3P53804 2025 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 A0A1B0GVC2 190 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 GAGE12JA6NER3 117 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 A6NNC1 897 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 E7EVH7 732 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 IPO5O00410 1097 aaKnown RBP5.24□□□□□ -1.57
LINC00254-201ENST00000563416 NCAM2O15394 837 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 ECE2O60344 883 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 NTN1O95631 604 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 AGR2O95994 175 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 TFRCP02786 760 aaKnown RBP5.24□□□□□ -1.57
LINC00254-201ENST00000563416 SNHG28P0DPA3 235 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 TNFRSF1BP20333 461 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 CDC25AP30304 524 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 SLC16A2P36021 539 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 POLD2P49005 469 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 CYP2J2P51589 502 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 C1QTNF8P60827 252 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 SMAD1Q15797 465 aaKnown RBP5.24□□□□□ -1.57
LINC00254-201ENST00000563416 GXYLT1Q4G148 440 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 KRTAP5-3Q6L8H2 238 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 HMBOX1Q6NT76 420 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 AAGABQ6PD74 315 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 SYNE3Q6ZMZ3 975 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 KDELC2Q7Z4H8 507 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 CCDC25Q86WR0 208 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 FAM110DQ8TAY7 271 aaPredicted RBP5.24□□□□□ -1.57
LINC00254-201ENST00000563416 TMEM174Q8WUU8 243 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 SDCCAG3Q96C92 435 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 HDHD5Q9BXW7 423 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 KRTAP17-1Q9BYP8 105 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 PUS3Q9BZE2 481 aaKnown RBP5.24□□□□□ -1.57
LINC00254-201ENST00000563416 ABHD16BQ9H3Z7 469 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 EBF3Q9H4W6 596 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 DBNDD1Q9H9R9 158 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 G6PC2Q9NQR9 355 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 RRN3Q9NYV6 651 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 KCND3Q9UK17 655 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 MYH1P12882 1939 aa5.24□□□□□ -1.57
LINC00254-201ENST00000563416 MROH5Q6ZUA9 1318 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 FAM90A20PA6NIJ5 464 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 J3KRW8 73 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 EYA2O00167 538 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 PSMD14O00487 310 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 MDM4O15151 490 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 TIMM44O43615 452 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 KRT38O76015 456 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 CIAO1O76071 339 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 IFNA2P01563 188 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 KLKB1P03952 638 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 CHN1P15882 459 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 RPS12P25398 132 aaKnown RBP5.23□□□□□ -1.57
LINC00254-201ENST00000563416 EPHX2P34913 555 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 AARSP49588 968 aaKnown RBP eCLIP5.23□□□□□ -1.57
LINC00254-201ENST00000563416 GMPSP49915 693 aaPredicted RBP5.23□□□□□ -1.57
LINC00254-201ENST00000563416 RBM5P52756 815 aaKnown RBP eCLIP5.23□□□□□ -1.57
LINC00254-201ENST00000563416 SETQ01105 290 aaPredicted RBP5.23□□□□□ -1.57
LINC00254-201ENST00000563416 PPATQ06203 517 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 MAPK7Q13164 816 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 PDCLQ13371 301 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 FHL1Q13642 323 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 TNIP1Q15025 636 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 PLK5Q496M5 336 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 C5orf22Q49AR2 442 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 LRRC24Q50LG9 513 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 ENTPD8Q5MY95 495 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 INTS11Q5TA45 600 aaKnown RBP5.23□□□□□ -1.57
LINC00254-201ENST00000563416 VWA5B1Q5TIE3 1220 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 FAM171A1Q5VUB5 890 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms