RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 FAM174AQ8TBP5 190 aa28.49■■■□□ 2.15
NME3-203ENST00000563367 HDAC11Q96DB2 347 aa28.49■■■□□ 2.15
NME3-203ENST00000563367 HEY1Q9Y5J3 304 aa28.49■■■□□ 2.15
NME3-203ENST00000563367 APOL1O14791 398 aa28.48■■■□□ 2.15
NME3-203ENST00000563367 YKT6O15498 198 aa28.48■■■□□ 2.15
NME3-203ENST00000563367 PSTPIP1O43586 416 aa28.48■■■□□ 2.15
NME3-203ENST00000563367 MX2P20592 715 aa28.48■■■□□ 2.15
NME3-203ENST00000563367 LIG3P49916 1009 aa28.48■■■□□ 2.15
NME3-203ENST00000563367 TRAF2Q12933 501 aa28.48■■■□□ 2.15
NME3-203ENST00000563367 RALGDSQ12967 914 aa28.48■■■□□ 2.15
NME3-203ENST00000563367 NPNTQ6UXI9 565 aa28.48■■■□□ 2.15
NME3-203ENST00000563367 KANSL1Q7Z3B3 1105 aa28.48■■■□□ 2.15
NME3-203ENST00000563367 RFX6Q8HWS3 928 aa28.48■■■□□ 2.15
NME3-203ENST00000563367 TP53I13Q8NBR0 393 aaPredicted RBP28.48■■■□□ 2.15
NME3-203ENST00000563367 TRAF3IP1Q8TDR0 691 aaPredicted RBP28.48■■■□□ 2.15
NME3-203ENST00000563367 LGMNQ99538 433 aa28.48■■■□□ 2.15
NME3-203ENST00000563367 ANP32EQ9BTT0 268 aa28.48■■■□□ 2.15
NME3-203ENST00000563367 MAK16Q9BXY0 300 aaKnown RBP28.48■■■□□ 2.15
NME3-203ENST00000563367 LACRTQ9GZZ8 138 aa28.48■■■□□ 2.15
NME3-203ENST00000563367 MBNL1Q9NR56 388 aaKnown RBP28.48■■■□□ 2.15
NME3-203ENST00000563367 SPEGQ15772 3267 aa28.48■■■□□ 2.15
NME3-203ENST00000563367 SOCS5O75159 536 aa28.47■■■□□ 2.15
NME3-203ENST00000563367 IPO7O95373 1038 aaKnown RBP28.47■■■□□ 2.15
NME3-203ENST00000563367 TOP3BO95985 862 aaKnown RBP28.47■■■□□ 2.15
NME3-203ENST00000563367 ITGAVP06756 1048 aa28.47■■■□□ 2.15
NME3-203ENST00000563367 C6P13671 934 aa28.47■■■□□ 2.15
NME3-203ENST00000563367 CCNB1P14635 433 aa28.47■■■□□ 2.15
NME3-203ENST00000563367 IGFALSP35858 605 aa28.47■■■□□ 2.15
NME3-203ENST00000563367 MARCKSL1P49006 195 aa28.47■■■□□ 2.15
NME3-203ENST00000563367 POLR2LP62875 67 aaKnown RBP28.47■■■□□ 2.15
NME3-203ENST00000563367 FOXC1Q12948 553 aa28.47■■■□□ 2.15
NME3-203ENST00000563367 IHHQ14623 411 aa28.47■■■□□ 2.15
NME3-203ENST00000563367 TAZQ16635 292 aa28.47■■■□□ 2.15
NME3-203ENST00000563367 ODF2Q5BJF6 829 aa28.47■■■□□ 2.15
NME3-203ENST00000563367 RALGPS1Q5JS13 557 aa28.47■■■□□ 2.15
NME3-203ENST00000563367 TPRG1LQ5T0D9 272 aa28.47■■■□□ 2.15
NME3-203ENST00000563367 C11orf63Q6NUN7 778 aa28.47■■■□□ 2.15
NME3-203ENST00000563367 GLRX5Q86SX6 157 aa28.47■■■□□ 2.15
NME3-203ENST00000563367 PAF1Q8N7H5 531 aa28.47■■■□□ 2.15
NME3-203ENST00000563367 CCNYQ8ND76 341 aa28.47■■■□□ 2.15
NME3-203ENST00000563367 SEMA3CQ99985 751 aa28.47■■■□□ 2.15
NME3-203ENST00000563367 RBM22Q9NW64 420 aaKnown RBP eCLIP28.47■■■□□ 2.15
NME3-203ENST00000563367 COL5A1P20908 1838 aaPredicted RBP28.47■■■□□ 2.15
NME3-203ENST00000563367 SDC3O75056 442 aa28.46■■■□□ 2.15
NME3-203ENST00000563367 CDKN2BP42772 138 aa28.46■■■□□ 2.15
NME3-203ENST00000563367 RABIFP47224 123 aa28.46■■■□□ 2.15
NME3-203ENST00000563367 PFN3P60673 137 aa28.46■■■□□ 2.15
NME3-203ENST00000563367 ITKQ08881 620 aa28.46■■■□□ 2.15
NME3-203ENST00000563367 CCDC13Q8IYE1 715 aa28.46■■■□□ 2.15
NME3-203ENST00000563367 PDCD6IPQ8WUM4 868 aaKnown RBP28.46■■■□□ 2.15
NME3-203ENST00000563367 SPOCK2Q92563 424 aa28.46■■■□□ 2.15
NME3-203ENST00000563367 CDC6Q99741 560 aa28.46■■■□□ 2.15
NME3-203ENST00000563367 WASF3Q9UPY6 502 aa28.46■■■□□ 2.15
NME3-203ENST00000563367 A8MX80 341 aa28.45■■■□□ 2.14
NME3-203ENST00000563367 KRT10P13645 584 aa28.45■■■□□ 2.14
NME3-203ENST00000563367 DYNLT1P63172 113 aa28.45■■■□□ 2.14
NME3-203ENST00000563367 DSC2Q02487 901 aa28.45■■■□□ 2.14
NME3-203ENST00000563367 PPIDQ08752 370 aaKnown RBP28.45■■■□□ 2.14
NME3-203ENST00000563367 FZD2Q14332 565 aa28.45■■■□□ 2.14
NME3-203ENST00000563367 LLGL1Q15334 1064 aa28.45■■■□□ 2.14
NME3-203ENST00000563367 ZNF542PQ5EBM4 170 aa28.45■■■□□ 2.14
NME3-203ENST00000563367 FAM182AQ5T1J6 154 aa28.45■■■□□ 2.14
NME3-203ENST00000563367 ALG1LQ6GMV1 187 aa28.45■■■□□ 2.14
NME3-203ENST00000563367 SPOCD1Q6ZMY3 1216 aa28.45■■■□□ 2.14
NME3-203ENST00000563367 DPPA4Q7L190 304 aa28.45■■■□□ 2.14
NME3-203ENST00000563367 DAAM2Q86T65 1068 aa28.45■■■□□ 2.14
NME3-203ENST00000563367 SLCO6A1Q86UG4 719 aa28.45■■■□□ 2.14
NME3-203ENST00000563367 DCP2Q8IU60 420 aaKnown RBP28.45■■■□□ 2.14
NME3-203ENST00000563367 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP28.45■■■□□ 2.14
NME3-203ENST00000563367 KRT35Q92764 455 aa28.45■■■□□ 2.14
NME3-203ENST00000563367 ZNF830Q96NB3 372 aaPredicted RBP28.45■■■□□ 2.14
NME3-203ENST00000563367 C1QTNF7Q9BXJ2 289 aa28.45■■■□□ 2.14
NME3-203ENST00000563367 POLR1EQ9GZS1 481 aaKnown RBP28.45■■■□□ 2.14
NME3-203ENST00000563367 HLA-DQB2P05538 268 aa28.44■■■□□ 2.14
NME3-203ENST00000563367 FTH1P19P0C7X4 201 aa28.44■■■□□ 2.14
NME3-203ENST00000563367 VAV2P52735 878 aa28.44■■■□□ 2.14
NME3-203ENST00000563367 IRF4Q15306 451 aa28.44■■■□□ 2.14
NME3-203ENST00000563367 WSCD2Q2TBF2 565 aa28.44■■■□□ 2.14
NME3-203ENST00000563367 LIPIQ6XZB0 460 aa28.44■■■□□ 2.14
NME3-203ENST00000563367 KATNAL2Q8IYT4 538 aa28.44■■■□□ 2.14
NME3-203ENST00000563367 EID2Q8N6I1 236 aa28.44■■■□□ 2.14
NME3-203ENST00000563367 OLFM3Q96PB7 478 aa28.44■■■□□ 2.14
NME3-203ENST00000563367 TOR4AQ9NXH8 423 aa28.44■■■□□ 2.14
NME3-203ENST00000563367 PTPRBP23467 1997 aa28.43■■■□□ 2.14
NME3-203ENST00000563367 SPTY2D1-AS1A0A0U1RR47 76 aa28.43■■■□□ 2.14
NME3-203ENST00000563367 BTNL10A8MVZ5 291 aa28.43■■■□□ 2.14
NME3-203ENST00000563367 KCNK1O00180 336 aa28.43■■■□□ 2.14
NME3-203ENST00000563367 PJA2O43164 708 aa28.43■■■□□ 2.14
NME3-203ENST00000563367 PGLSO95336 258 aa28.43■■■□□ 2.14
NME3-203ENST00000563367 CPP00450 1065 aa28.43■■■□□ 2.14
NME3-203ENST00000563367 ATXN1LP0C7T5 689 aaKnown RBP28.43■■■□□ 2.14
NME3-203ENST00000563367 ZFXP17010 805 aaPredicted RBP28.43■■■□□ 2.14
NME3-203ENST00000563367 SHC2P98077 582 aa28.43■■■□□ 2.14
NME3-203ENST00000563367 PDE1CQ14123 709 aaPredicted RBP28.43■■■□□ 2.14
NME3-203ENST00000563367 LRRC14Q15048 493 aa28.43■■■□□ 2.14
NME3-203ENST00000563367 INAVAQ3KP66 663 aa28.43■■■□□ 2.14
NME3-203ENST00000563367 SLC25A45Q8N413 288 aa28.43■■■□□ 2.14
NME3-203ENST00000563367 PNPLA1Q8N8W4 532 aa28.43■■■□□ 2.14
NME3-203ENST00000563367 ARRDC2Q8TBH0 407 aa28.43■■■□□ 2.14
NME3-203ENST00000563367 B4GALT6Q9UBX8 382 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms