RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 MACC1Q6ZN28 852 aa12.31□□□□□ -0.44
NSMCE1-204ENST00000563273 ZSWIM9Q86XI8 627 aa12.31□□□□□ -0.44
NSMCE1-204ENST00000563273 TP53INP2Q8IXH6 220 aa12.31□□□□□ -0.44
NSMCE1-204ENST00000563273 RHOT2Q8IXI1 618 aa12.31□□□□□ -0.44
NSMCE1-204ENST00000563273 RNF214Q8ND24 703 aa12.31□□□□□ -0.44
NSMCE1-204ENST00000563273 TSGA13Q96PP4 275 aa12.31□□□□□ -0.44
NSMCE1-204ENST00000563273 PACSIN1Q9BY11 444 aa12.31□□□□□ -0.44
NSMCE1-204ENST00000563273 NHEJ1Q9H9Q4 299 aaPredicted RBP12.31□□□□□ -0.44
NSMCE1-204ENST00000563273 EVA1BQ9NVM1 165 aa12.31□□□□□ -0.44
NSMCE1-204ENST00000563273 HAUS2Q9NVX0 235 aa12.31□□□□□ -0.44
NSMCE1-204ENST00000563273 DNAJC28Q9NX36 388 aa12.31□□□□□ -0.44
NSMCE1-204ENST00000563273 KCTD5Q9NXV2 234 aa12.31□□□□□ -0.44
NSMCE1-204ENST00000563273 NCKIPSDQ9NZQ3 722 aa12.31□□□□□ -0.44
NSMCE1-204ENST00000563273 FREM2Q5SZK8 3169 aa12.31□□□□□ -0.44
NSMCE1-204ENST00000563273 ASPMQ8IZT6 3477 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 MAP1BP46821 2468 aaKnown RBP12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 AKR1B15C9JRZ8 316 aaPredicted RBP12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 TRIM38O00635 465 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 TPP1O14773 563 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 SIGLEC6O43699 453 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 SDC3O75056 442 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 CKMT1AP12532 417 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 CES1P23141 567 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 NFKBIAP25963 317 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 GARSP41250 739 aaKnown RBP12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 LIG3P49916 1009 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 SCNN1BP51168 640 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 THOP1P52888 689 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 E2F1Q01094 437 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 GALNT2Q10471 571 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 RALGDSQ12967 914 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 EIF2B5Q13144 721 aaKnown RBP12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 CAMK2BQ13554 666 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 WSCD2Q2TBF2 565 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 ANKRD20A8PQ5CZ79 823 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 LRRC73Q5JTD7 316 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 MARC1Q5VT66 337 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 LRRC38Q5VT99 294 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 NCBP2-AS2Q69YL0 99 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 TIGD7Q6NT04 549 aaPredicted RBP12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 DHRS13Q6UX07 377 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 DPPA4Q7L190 304 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 SDR16C5Q8N3Y7 309 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 KCTD6Q8NC69 237 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 ZNF548Q8NEK5 533 aaPredicted RBP12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 PCDH19Q8TAB3 1148 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 MAML1Q92585 1016 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 CHP1Q99653 195 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 WRAP53Q9BUR4 548 aaKnown RBP12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 MBNL1Q9NR56 388 aaKnown RBP12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 UCKL1Q9NWZ5 548 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 ZMIZ1Q9ULJ6 1067 aa12.3□□□□□ -0.44
NSMCE1-204ENST00000563273 AKAP13Q12802 2813 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 GOLGA8CPA6NN73 597 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 MATN3O15232 486 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 AQP9O43315 295 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 MFSD11O43934 449 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 GP1BAP07359 652 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 HOXC4P09017 264 aaPredicted RBP12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 CD48P09326 243 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 JUNDP17535 347 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 ITIH2P19823 946 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 MX2P20592 715 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 CCNCP24863 283 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 HNF1BP35680 557 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 SSR1P43307 286 aaKnown RBP12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 MMP13P45452 471 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 BLKP51451 505 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 DUSP3P51452 185 aaPredicted RBP12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 ADKP55263 362 aaKnown RBP12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 TAS2R40P59535 323 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 MMRN1Q13201 1228 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 DNAJC3Q13217 504 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 MTM1Q13496 603 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 IRF4Q15306 451 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 IFI16Q16666 785 aaKnown RBP12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 TPRG1LQ5T0D9 272 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 ZCCHC8Q6NZY4 707 aaKnown RBP12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 LIPIQ6XZB0 460 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 PGBD5Q8N414 524 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 PDCD7Q8N8D1 485 aaKnown RBP12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 ATL2Q8NHH9 583 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 SLC35G2Q8TBE7 412 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 ZCCHC14Q8WYQ9 949 aaKnown RBP12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 NSMCE3Q96MG7 304 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 NOD2Q9HC29 1040 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 SCUBE2Q9NQ36 999 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 SPASTQ9UBP0 616 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 KLF15Q9UIH9 416 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 SALL4Q9UJQ4 1053 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 PPIL1Q9Y3C6 166 aa12.29□□□□□ -0.44
NSMCE1-204ENST00000563273 ZZEF1O43149 2961 aa12.28□□□□□ -0.44
NSMCE1-204ENST00000563273 IGF2RP11717 2491 aa12.28□□□□□ -0.44
NSMCE1-204ENST00000563273 TMEM131Q92545 1883 aa12.28□□□□□ -0.44
NSMCE1-204ENST00000563273 LMO7DNF2Z398 122 aa12.28□□□□□ -0.44
NSMCE1-204ENST00000563273 K7ESM1 405 aa12.28□□□□□ -0.44
NSMCE1-204ENST00000563273 PSMD11O00231 422 aa12.28□□□□□ -0.44
NSMCE1-204ENST00000563273 LZTS3O60299 673 aaPredicted RBP12.28□□□□□ -0.44
NSMCE1-204ENST00000563273 ELFN1P0C7U0 828 aa12.28□□□□□ -0.44
NSMCE1-204ENST00000563273 HTR1BP28222 390 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms