RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 OSBPL8Q9BZF1 889 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 SMOC1Q9H4F8 434 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 SUV39H2Q9H5I1 410 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 LZTFL1Q9NQ48 299 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 DYRK4Q9NR20 520 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 SAE1Q9UBE0 346 aaPredicted RBP6.25□□□□□ -1.41
CNOT1-204ENST00000563130 SUSD2Q9UGT4 822 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 PACSIN2Q9UNF0 486 aaPredicted RBP6.25□□□□□ -1.41
CNOT1-204ENST00000563130 FADS3Q9Y5Q0 445 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 CFAP54Q96N23 3096 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 ATXN2Q99700 1313 aaKnown RBP6.24□□□□□ -1.41
CNOT1-204ENST00000563130 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.24□□□□□ -1.41
CNOT1-204ENST00000563130 LNP1A1A4G5 178 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 FAM47DPA6NHR8 397 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 MEI4A8MW99 385 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 APOC4-APOC2K7ER74 178 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 KCNK1O00180 336 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 FSBPO95073 299 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 APOC2P02655 101 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 SERPINF2P08697 491 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 SERPINA4P29622 427 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 SUOXP51687 545 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 MAXP61244 160 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 IRX4P78413 519 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 ZBTB17Q13105 803 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 KLF1Q13351 362 aaPredicted RBP6.24□□□□□ -1.41
CNOT1-204ENST00000563130 PRKD1Q15139 912 aaPredicted RBP6.24□□□□□ -1.41
CNOT1-204ENST00000563130 SF3A2Q15428 464 aaKnown RBP6.24□□□□□ -1.41
CNOT1-204ENST00000563130 UGP2Q16851 508 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 DUOXA1Q1HG43 343 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 TRIM61Q5EBN2 209 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 MEI1Q5TIA1 1274 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 KAZNQ674X7 775 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 TCEAL6Q6IPX3 200 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 AADACL2Q6P093 401 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 BRAT1Q6PJG6 821 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 BZW1Q7L1Q6 419 aaKnown RBP6.24□□□□□ -1.41
CNOT1-204ENST00000563130 RABEPKQ7Z6M1 372 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 CCDC50Q8IVM0 306 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 RGL4Q8IZJ4 473 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 UBL4BQ8N7F7 174 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 CCNYQ8ND76 341 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 CEP76Q8TAP6 659 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 ARRDC2Q8TBH0 407 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 ANP32BQ92688 251 aaKnown RBP6.24□□□□□ -1.41
CNOT1-204ENST00000563130 P3H4Q92791 437 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 TCEAL3Q969E4 200 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 HINFPQ9BQA5 517 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 POLR1EQ9GZS1 481 aaKnown RBP6.24□□□□□ -1.41
CNOT1-204ENST00000563130 ATP13A3Q9H7F0 1226 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 NOD2Q9HC29 1040 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 RXFP3Q9NSD7 469 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 RBM22Q9NW64 420 aaKnown RBP eCLIP6.24□□□□□ -1.41
CNOT1-204ENST00000563130 ZFR2Q9UPR6 939 aaKnown RBP6.24□□□□□ -1.41
CNOT1-204ENST00000563130 ATP8A1Q9Y2Q0 1164 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 A0A1B0GTW7 788 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.24□□□□□ -1.41
CNOT1-204ENST00000563130 A0A1W2PQU0 124 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 PPP1R12AO14974 1030 aaPredicted RBP6.24□□□□□ -1.41
CNOT1-204ENST00000563130 KHNYNO15037 678 aaKnown RBP6.24□□□□□ -1.41
CNOT1-204ENST00000563130 BCAT2O15382 392 aaPredicted RBP6.24□□□□□ -1.41
CNOT1-204ENST00000563130 TSPAN6O43657 245 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 FZD6O60353 706 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 SOCS5O75159 536 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 HLA-DQB2P05538 268 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 GNSP15586 552 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 CES1P23141 567 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 NUDT1P36639 197 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 RACK1P63244 317 aaKnown RBP6.24□□□□□ -1.41
CNOT1-204ENST00000563130 BCL2L1Q07817 233 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 XRCC4Q13426 336 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 NOMO1Q15155 1222 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 TTC7BQ86TV6 843 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 ZSCAN30Q86W11 494 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 HORMAD1Q86X24 394 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 REXO1L1PQ8IX06 675 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 KIAA2013Q8IYS2 634 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 ZCCHC9Q8N567 271 aaKnown RBP6.24□□□□□ -1.41
CNOT1-204ENST00000563130 TMEM145Q8NBT3 493 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 SEMA3CQ99985 751 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 HEMGNQ9BXL5 484 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 NT5MQ9NPB1 228 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 GGT7Q9UJ14 662 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 SLC6A14Q9UN76 642 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 DMTF1Q9Y222 760 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 PCDHGC4Q9Y5F7 938 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.24□□□□□ -1.41
CNOT1-204ENST00000563130 WDR87Q6ZQQ6 2873 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 CACNA1EQ15878 2313 aa6.24□□□□□ -1.41
CNOT1-204ENST00000563130 PCDH15Q96QU1 1955 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 A0A1W2PQ67 120 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 A0A1W2PR77 199 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 UPK3BL1B0FP48 263 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 PRR5-ARHGAP8B1AHC4 643 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 UPK3BL2E5RIL1 263 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 CDX4O14627 284 aaPredicted RBP6.23□□□□□ -1.41
CNOT1-204ENST00000563130 WNT9AO14904 365 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 RNGTTO60942 597 aaKnown RBP6.23□□□□□ -1.41
CNOT1-204ENST00000563130 JCHAINP01591 159 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 MMP2P08253 660 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms