RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 ITIH2P19823 946 aa16.83■□□□□ 0.28
CLK3-207ENST00000562389 CA4P22748 312 aa16.83■□□□□ 0.28
CLK3-207ENST00000562389 ATP5OP48047 213 aa16.83■□□□□ 0.28
CLK3-207ENST00000562389 LIMK1P53667 647 aa16.83■□□□□ 0.28
CLK3-207ENST00000562389 WASHC5Q12768 1159 aa16.83■□□□□ 0.28
CLK3-207ENST00000562389 FGL2Q14314 439 aa16.83■□□□□ 0.28
CLK3-207ENST00000562389 IHHQ14623 411 aa16.83■□□□□ 0.28
CLK3-207ENST00000562389 SLC14A2Q15849 920 aa16.83■□□□□ 0.28
CLK3-207ENST00000562389 ARMC12Q5T9G4 340 aa16.83■□□□□ 0.28
CLK3-207ENST00000562389 CDKL3Q8IVW4 592 aaPredicted RBP16.83■□□□□ 0.28
CLK3-207ENST00000562389 PAF1Q8N7H5 531 aa16.83■□□□□ 0.28
CLK3-207ENST00000562389 TMEM145Q8NBT3 493 aa16.83■□□□□ 0.28
CLK3-207ENST00000562389 PDCD6IPQ8WUM4 868 aaKnown RBP16.83■□□□□ 0.28
CLK3-207ENST00000562389 HTR3CQ8WXA8 447 aa16.83■□□□□ 0.28
CLK3-207ENST00000562389 TEKT5Q96M29 485 aa16.83■□□□□ 0.28
CLK3-207ENST00000562389 AGAP3Q96P47 875 aa16.83■□□□□ 0.28
CLK3-207ENST00000562389 C1QTNF2Q9BXJ5 285 aa16.83■□□□□ 0.28
CLK3-207ENST00000562389 TDRD1Q9BXT4 1180 aaKnown RBP16.83■□□□□ 0.28
CLK3-207ENST00000562389 SLC17A9Q9BYT1 436 aa16.83■□□□□ 0.28
CLK3-207ENST00000562389 ZDHHC5Q9C0B5 715 aa16.83■□□□□ 0.28
CLK3-207ENST00000562389 RXFP3Q9NSD7 469 aa16.83■□□□□ 0.28
CLK3-207ENST00000562389 PHTF1Q9UMS5 762 aa16.83■□□□□ 0.28
CLK3-207ENST00000562389 PCDHB9Q9Y5E1 797 aa16.83■□□□□ 0.28
CLK3-207ENST00000562389 A0A1W2PR77 199 aa16.82■□□□□ 0.28
CLK3-207ENST00000562389 CFAP69A5D8W1 941 aa16.82■□□□□ 0.28
CLK3-207ENST00000562389 IGLON5A6NGN9 336 aa16.82■□□□□ 0.28
CLK3-207ENST00000562389 SLC31A1O15431 190 aa16.82■□□□□ 0.28
CLK3-207ENST00000562389 GDF9O60383 454 aa16.82■□□□□ 0.28
CLK3-207ENST00000562389 ZNF189O75820 626 aaPredicted RBP16.82■□□□□ 0.28
CLK3-207ENST00000562389 PRKCGP05129 697 aa16.82■□□□□ 0.28
CLK3-207ENST00000562389 MMP2P08253 660 aa16.82■□□□□ 0.28
CLK3-207ENST00000562389 RBP3P10745 1247 aa16.82■□□□□ 0.28
CLK3-207ENST00000562389 PRLRP16471 622 aa16.82■□□□□ 0.28
CLK3-207ENST00000562389 HNRNPA2B1P22626 353 aaKnown RBP16.82■□□□□ 0.28
CLK3-207ENST00000562389 NFKBIAP25963 317 aa16.82■□□□□ 0.28
CLK3-207ENST00000562389 CD38P28907 300 aa16.82■□□□□ 0.28
CLK3-207ENST00000562389 AKT2P31751 481 aa16.82■□□□□ 0.28
CLK3-207ENST00000562389 CSNK1EP49674 416 aaKnown RBP16.82■□□□□ 0.28
CLK3-207ENST00000562389 EIF3EP60228 445 aaKnown RBP16.82■□□□□ 0.28
CLK3-207ENST00000562389 SKOR1P84550 965 aa16.82■□□□□ 0.28
CLK3-207ENST00000562389 GRIK2Q13002 908 aa16.82■□□□□ 0.28
CLK3-207ENST00000562389 DPPA4Q7L190 304 aa16.82■□□□□ 0.28
CLK3-207ENST00000562389 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.82■□□□□ 0.28
CLK3-207ENST00000562389 NETO1Q8TDF5 533 aa16.82■□□□□ 0.28
CLK3-207ENST00000562389 PIH1D2Q8WWB5 315 aa16.82■□□□□ 0.28
CLK3-207ENST00000562389 KLK6Q92876 244 aa16.82■□□□□ 0.28
CLK3-207ENST00000562389 IMP4Q96G21 291 aaKnown RBP16.82■□□□□ 0.28
CLK3-207ENST00000562389 LENG8Q96PV6 779 aaPredicted RBP16.82■□□□□ 0.28
CLK3-207ENST00000562389 TLR10Q9BXR5 811 aa16.82■□□□□ 0.28
CLK3-207ENST00000562389 SLC25A51Q9H1U9 297 aa16.82■□□□□ 0.28
CLK3-207ENST00000562389 GLOD4Q9HC38 313 aa16.82■□□□□ 0.28
CLK3-207ENST00000562389 FSCN3Q9NQT6 498 aa16.82■□□□□ 0.28
CLK3-207ENST00000562389 AASDHPPTQ9NRN7 309 aa16.82■□□□□ 0.28
CLK3-207ENST00000562389 PPIL1Q9Y3C6 166 aa16.82■□□□□ 0.28
CLK3-207ENST00000562389 TMEM131Q92545 1883 aa16.82■□□□□ 0.28
CLK3-207ENST00000562389 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.81■□□□□ 0.28
CLK3-207ENST00000562389 A0A1B0GVT2 93 aa16.81■□□□□ 0.28
CLK3-207ENST00000562389 KCNK3O14649 394 aa16.81■□□□□ 0.28
CLK3-207ENST00000562389 WNT9AO14904 365 aa16.81■□□□□ 0.28
CLK3-207ENST00000562389 VILLO15195 856 aa16.81■□□□□ 0.28
CLK3-207ENST00000562389 MMP20O60882 483 aa16.81■□□□□ 0.28
CLK3-207ENST00000562389 TM7SF2O76062 418 aa16.81■□□□□ 0.28
CLK3-207ENST00000562389 WNT1P04628 370 aa16.81■□□□□ 0.28
CLK3-207ENST00000562389 RBL1P28749 1068 aa16.81■□□□□ 0.28
CLK3-207ENST00000562389 CD86P42081 329 aa16.81■□□□□ 0.28
CLK3-207ENST00000562389 FAM193AP78312 1265 aa16.81■□□□□ 0.28
CLK3-207ENST00000562389 BNC1Q01954 994 aa16.81■□□□□ 0.28
CLK3-207ENST00000562389 OVGP1Q12889 678 aa16.81■□□□□ 0.28
CLK3-207ENST00000562389 RALGDSQ12967 914 aa16.81■□□□□ 0.28
CLK3-207ENST00000562389 SGCGQ13326 291 aa16.81■□□□□ 0.28
CLK3-207ENST00000562389 STAT4Q14765 748 aa16.81■□□□□ 0.28
CLK3-207ENST00000562389 IL27RAQ6UWB1 636 aa16.81■□□□□ 0.28
CLK3-207ENST00000562389 ADAT2Q7Z6V5 191 aaKnown RBP16.81■□□□□ 0.28
CLK3-207ENST00000562389 IQCHQ86VS3 1027 aa16.81■□□□□ 0.28
CLK3-207ENST00000562389 MFSD2AQ8NA29 543 aa16.81■□□□□ 0.28
CLK3-207ENST00000562389 DENND6BQ8NEG7 585 aa16.81■□□□□ 0.28
CLK3-207ENST00000562389 SKA1Q96BD8 255 aa16.81■□□□□ 0.28
CLK3-207ENST00000562389 TADA1Q96BN2 335 aa16.81■□□□□ 0.28
CLK3-207ENST00000562389 FERMT1Q9BQL6 677 aa16.81■□□□□ 0.28
CLK3-207ENST00000562389 WRAP53Q9BUR4 548 aaKnown RBP16.81■□□□□ 0.28
CLK3-207ENST00000562389 FZD3Q9NPG1 666 aa16.81■□□□□ 0.28
CLK3-207ENST00000562389 TMEM9BQ9NQ34 198 aa16.81■□□□□ 0.28
CLK3-207ENST00000562389 KLHL8Q9P2G9 620 aaPredicted RBP16.81■□□□□ 0.28
CLK3-207ENST00000562389 ANKRD6Q9Y2G4 727 aa16.81■□□□□ 0.28
CLK3-207ENST00000562389 TCRBV7S2A1N4TA0A589 114 aa16.8■□□□□ 0.28
CLK3-207ENST00000562389 CDX4O14627 284 aaPredicted RBP16.8■□□□□ 0.28
CLK3-207ENST00000562389 PAK4O96013 591 aaPredicted RBP16.8■□□□□ 0.28
CLK3-207ENST00000562389 PRLP01236 227 aa16.8■□□□□ 0.28
CLK3-207ENST00000562389 PDHA1P08559 390 aa16.8■□□□□ 0.28
CLK3-207ENST00000562389 CYP2A6P11509 494 aaPredicted RBP16.8■□□□□ 0.28
CLK3-207ENST00000562389 C6P13671 934 aa16.8■□□□□ 0.28
CLK3-207ENST00000562389 CD68P34810 354 aaPredicted RBP16.8■□□□□ 0.28
CLK3-207ENST00000562389 RPL26P61254 145 aaKnown RBP16.8■□□□□ 0.28
CLK3-207ENST00000562389 AGERQ15109 404 aa16.8■□□□□ 0.28
CLK3-207ENST00000562389 FAM182AQ5T1J6 154 aa16.8■□□□□ 0.28
CLK3-207ENST00000562389 DARS2Q6PI48 645 aaKnown RBP16.8■□□□□ 0.28
CLK3-207ENST00000562389 LAYNQ6UX15 382 aa16.8■□□□□ 0.28
CLK3-207ENST00000562389 USP45Q70EL2 814 aa16.8■□□□□ 0.28
CLK3-207ENST00000562389 SLC13A5Q86YT5 568 aaPredicted RBP16.8■□□□□ 0.28
CLK3-207ENST00000562389 NDUFAF2Q8N183 169 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms