RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 ALDH1A3P47895 512 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 ARCN1P48444 511 aaKnown RBP11.05□□□□□ -0.64
NEIL1-202ENST00000561643 MRPS22P82650 360 aaKnown RBP11.05□□□□□ -0.64
NEIL1-202ENST00000561643 DMPKQ09013 629 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 PATL1Q86TB9 770 aaKnown RBP11.05□□□□□ -0.64
NEIL1-202ENST00000561643 PQLC1Q8N2U9 271 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 LZTR1Q8N653 840 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 CNBD2Q96M20 576 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 TMEM209Q96SK2 561 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 SENP6Q9GZR1 1112 aaPredicted RBP11.05□□□□□ -0.64
NEIL1-202ENST00000561643 NDFIP2Q9NV92 336 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 FBXO5Q9UKT4 447 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 NEU3Q9UQ49 428 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 DMTF1Q9Y222 760 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 DOCK3Q8IZD9 2030 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 SLC22A2O15244 555 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 FGF10O15520 208 aaPredicted RBP11.05□□□□□ -0.64
NEIL1-202ENST00000561643 XRCC1P18887 633 aaPredicted RBP11.05□□□□□ -0.64
NEIL1-202ENST00000561643 POLD2P49005 469 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 KPNA2P52292 529 aaKnown RBP11.05□□□□□ -0.64
NEIL1-202ENST00000561643 ATXN3P54252 364 aaPredicted RBP11.05□□□□□ -0.64
NEIL1-202ENST00000561643 NSUN2Q08J23 767 aaKnown RBP eCLIP11.05□□□□□ -0.64
NEIL1-202ENST00000561643 CSHL1Q14406 222 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 FAM171BQ6P995 826 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 RNF135Q8IUD6 432 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 CPSF7Q8N684 471 aaKnown RBP11.05□□□□□ -0.64
NEIL1-202ENST00000561643 HEXDCQ8WVB3 486 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 GPR78Q96P69 363 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 POMKQ9H5K3 350 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 WDR41Q9HAD4 459 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 ZBTB26Q9HCK0 441 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 BCAP29Q9UHQ4 241 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 ZNF236Q9UL36 1845 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 CASQ2O14958 399 aaPredicted RBP11.04□□□□□ -0.64
NEIL1-202ENST00000561643 PORP16435 677 aaPredicted RBP11.04□□□□□ -0.64
NEIL1-202ENST00000561643 DNAJB1P25685 340 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 ADSLP30566 484 aaPredicted RBP11.04□□□□□ -0.64
NEIL1-202ENST00000561643 IRF5Q13568 498 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 BRMS1LQ5PSV4 323 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 NEPROQ6NW34 567 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 KLHDC8BQ8IXV7 354 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 PGAM4Q8N0Y7 254 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 TXNDC5Q8NBS9 432 aaKnown RBP11.04□□□□□ -0.64
NEIL1-202ENST00000561643 PDCD6IPQ8WUM4 868 aaKnown RBP11.04□□□□□ -0.64
NEIL1-202ENST00000561643 PTCD2Q8WV60 388 aaKnown RBP11.04□□□□□ -0.64
NEIL1-202ENST00000561643 TMA16Q96EY4 203 aaKnown RBP11.04□□□□□ -0.64
NEIL1-202ENST00000561643 LRGUKQ96M69 825 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 MRPL57Q9BQC6 102 aaKnown RBP11.04□□□□□ -0.64
NEIL1-202ENST00000561643 EFCAB1Q9HAE3 211 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 CYP4F12Q9HCS2 524 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 ABCC13Q9NSE7 274 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 MPP6Q9NZW5 540 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 C6orf203Q9P0P8 240 aaPredicted RBP11.04□□□□□ -0.64
NEIL1-202ENST00000561643 A0A087X1B8 175 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 MYADML2A6NDP7 307 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 NEMP2A6NFY4 417 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 TRPC5OSA6NMA1 111 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 TRPA1O75762 1119 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 IGLV3-25P01717 112 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 HNRNPLP14866 589 aaKnown RBP eCLIP11.04□□□□□ -0.64
NEIL1-202ENST00000561643 CPB1P15086 417 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 HOXC8P31273 242 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 PIGGQ5H8A4 983 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 TSTD2Q5T7W7 516 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 ZNF280DQ6N043 979 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 TIGD7Q6NT04 549 aaPredicted RBP11.04□□□□□ -0.64
NEIL1-202ENST00000561643 PIWIL4Q7Z3Z4 852 aaKnown RBP11.04□□□□□ -0.64
NEIL1-202ENST00000561643 LRRTM3Q86VH5 581 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 KDM1BQ8NB78 822 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 C2CD4AQ8NCU7 369 aaPredicted RBP11.04□□□□□ -0.64
NEIL1-202ENST00000561643 OR10T2Q8NGX3 314 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 CASP10Q92851 521 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 PPP1R2P1Q96PQ5 205 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 ITM2BQ9Y287 266 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 COPG1Q9Y678 874 aaKnown RBP11.04□□□□□ -0.64
NEIL1-202ENST00000561643 AURKAO14965 403 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 PEX1O43933 1283 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 NPHS1O60500 1241 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 CELF2O95319 508 aaKnown RBP11.04□□□□□ -0.64
NEIL1-202ENST00000561643 ADRA1AP35348 466 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 GRIK1P39086 918 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 HALP42357 657 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 TUFMP49411 452 aaKnown RBP11.04□□□□□ -0.64
NEIL1-202ENST00000561643 SLC5A3P53794 718 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 TSPY1Q01534 308 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 C16orf72Q14CZ0 275 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 ZNF423Q2M1K9 1284 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 NOMO2Q5JPE7 1267 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 GNASQ5JWF2 1037 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 RARS2Q5T160 578 aaKnown RBP11.04□□□□□ -0.64
NEIL1-202ENST00000561643 KIAA0930Q6ICG6 404 aaPredicted RBP11.04□□□□□ -0.64
NEIL1-202ENST00000561643 OVOS1Q6IE37 1185 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 CNSTQ6PJW8 725 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 GIPC3Q8TF64 312 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 MRGPRX2Q96LB1 330 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 NPAS2Q99743 824 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 ZNF385DQ9H6B1 395 aa11.04□□□□□ -0.64
NEIL1-202ENST00000561643 RBMX2Q9Y388 322 aaKnown RBP11.04□□□□□ -0.64
NEIL1-202ENST00000561643 A0A1B0GTW7 788 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 ARHGAP10A1A4S6 786 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms