RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	GLDC	P23378	1020 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	FSHR	P23945	695 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	CD86	P42081	329 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	NPY2R	P49146	381 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	ATP1A2	P50993	1020 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	WNT3A	P56704	352 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	MAX	P61244	160 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	DSC2	Q02487	901 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	NR1H3	Q13133	447 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	FZD5	Q13467	585 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	CDH18	Q13634	790 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	SIM2	Q14190	667 aa	Predicted RBP	7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	FRG1	Q14331	258 aa	Known RBP	7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	SLC14A2	Q15849	920 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	ZNF77	Q15935	545 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	KBTBD12	Q3ZCT8	623 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	MPPE1	Q53F39	396 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	SPANXN3	Q5MJ09	141 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	MPP7	Q5T2T1	576 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	CERCAM	Q5T4B2	595 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	DENND5A	Q6IQ26	1287 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	ADGRD1	Q6QNK2	874 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	LEKR1	Q6ZMV7	388 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	CYS1	Q717R9	158 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	TAOK1	Q7L7X3	1001 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	CCDC117	Q8IWD4	279 aa	Predicted RBP	7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	CYP4X1	Q8N118	509 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	BBS5	Q8N3I7	341 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	CARNMT1	Q8N4J0	409 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	TTC16	Q8NEE8	873 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	ARRDC2	Q8TBH0	407 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	WFDC5	Q8TCV5	224 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	DCAKD	Q8WVC6	231 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	SLC44A1	Q8WWI5	657 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	MRGPRX2	Q96LB1	330 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	KXD1	Q9BQD3	176 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	APOL2	Q9BQE5	337 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	MGME1	Q9BQP7	344 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	TRIM56	Q9BRZ2	755 aa	Known RBP	7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	SPON2	Q9BUD6	331 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	FSD1L	Q9BXM9	530 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	POLR1E	Q9GZS1	481 aa	Known RBP	7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	IL22	Q9GZX6	179 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	MUC3B	Q9H195	1237 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	CHRD	Q9H2X0	955 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	CNOT10	Q9H9A5	744 aa	Known RBP	7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	ATP13A1	Q9HD20	1204 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	TDP1	Q9NUW8	608 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	PSD3	Q9NYI0	1048 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	UBA2	Q9UBT2	640 aa	Predicted RBP	7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	SEPT3	Q9UH03	358 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	TBK1	Q9UHD2	729 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	CDH7	Q9ULB5	785 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	OR51B4	Q9Y5P0	310 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	ACTL7B	Q9Y614	415 aa		7.6	□□□□□ -1.19
TPM1-231	ENST00000561395	FAM237B	A0A1B0GVD1	139 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	MAGEB16	A2A368	324 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	TMEM8B	A6NDV4	472 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	CXorf49	A8MYA2	514 aa	Predicted RBP	7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	CBX4	O00257	560 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	PMPCB	O75439	489 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	PIAS1	O75925	651 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	USP1	O94782	785 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	KCNK5	O95279	499 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	ZIC2	O95409	532 aa	Predicted RBP	7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	POLB	P06746	335 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	INHBA	P08476	426 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	MZF1	P28698	734 aa	Predicted RBP	7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	WEE1	P30291	646 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	CSK	P41240	450 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	MSH2	P43246	934 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	NUMB	P49757	651 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	CCR3	P51677	355 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	ARF5	P84085	180 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	ITK	Q08881	620 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	SRSF5	Q13243	272 aa	Known RBP	7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	NAB1	Q13506	487 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	IHH	Q14623	411 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	SF3A2	Q15428	464 aa	Known RBP	7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	TERF2	Q15554	542 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	FSCB	Q5H9T9	825 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	FYB2	Q5VWT5	728 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	ARMC3	Q5W041	872 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	PSAPL1	Q6NUJ1	521 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	ZNF449	Q6P9G9	518 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	TRMT10B	Q6PF06	316 aa	Known RBP	7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	RANBP10	Q6VN20	620 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	ZNF852	Q6ZMS4	543 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	TMEM135	Q86UB9	458 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	TRABD2A	Q86V40	505 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	EXOC3L1	Q86VI1	746 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	SLC26A11	Q86WA9	606 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	LRRC6	Q86X45	466 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	MFN1	Q8IWA4	741 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	DCAF4L2	Q8NA75	395 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	ITFG1	Q8TB96	612 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	DDI1	Q8WTU0	396 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	MZB1	Q8WU39	189 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	ING5	Q8WYH8	240 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	TTC17	Q96AE7	1141 aa		7.59	□□□□□ -1.19

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