RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 CD48P09326 243 aa17.33■□□□□ 0.36
CDC42BPB-208ENST00000561271 ALPPL2P10696 532 aa17.33■□□□□ 0.36
CDC42BPB-208ENST00000561271 JUNDP17535 347 aa17.33■□□□□ 0.36
CDC42BPB-208ENST00000561271 HNRNPH3P31942 346 aaKnown RBP17.33■□□□□ 0.36
CDC42BPB-208ENST00000561271 SCNN1BP51168 640 aa17.33■□□□□ 0.36
CDC42BPB-208ENST00000561271 CDH6P55285 790 aa17.33■□□□□ 0.36
CDC42BPB-208ENST00000561271 RALGDSQ12967 914 aa17.33■□□□□ 0.36
CDC42BPB-208ENST00000561271 MMRN1Q13201 1228 aa17.33■□□□□ 0.36
CDC42BPB-208ENST00000561271 ILKQ13418 452 aa17.33■□□□□ 0.36
CDC42BPB-208ENST00000561271 RNF214Q8ND24 703 aa17.33■□□□□ 0.36
CDC42BPB-208ENST00000561271 ECHDC3Q96DC8 303 aa17.33■□□□□ 0.36
CDC42BPB-208ENST00000561271 APOLD1Q96LR9 279 aa17.33■□□□□ 0.36
CDC42BPB-208ENST00000561271 PSKH2Q96QS6 385 aa17.33■□□□□ 0.36
CDC42BPB-208ENST00000561271 TSPY26PQ9H489 355 aa17.33■□□□□ 0.36
CDC42BPB-208ENST00000561271 RALYQ9UKM9 306 aaKnown RBP17.33■□□□□ 0.36
CDC42BPB-208ENST00000561271 LY6G6EA0A0G2JKS1 128 aa17.32■□□□□ 0.36
CDC42BPB-208ENST00000561271 NEMP2A6NFY4 417 aa17.32■□□□□ 0.36
CDC42BPB-208ENST00000561271 K7ESM1 405 aa17.32■□□□□ 0.36
CDC42BPB-208ENST00000561271 MYO1FO00160 1098 aa17.32■□□□□ 0.36
CDC42BPB-208ENST00000561271 SCAMP1O15126 338 aa17.32■□□□□ 0.36
CDC42BPB-208ENST00000561271 CBFA2T2O43439 604 aa17.32■□□□□ 0.36
CDC42BPB-208ENST00000561271 MFSD11O43934 449 aa17.32■□□□□ 0.36
CDC42BPB-208ENST00000561271 PEX11BO96011 259 aa17.32■□□□□ 0.36
CDC42BPB-208ENST00000561271 CDK4P11802 303 aa17.32■□□□□ 0.36
CDC42BPB-208ENST00000561271 JUPP14923 745 aa17.32■□□□□ 0.36
CDC42BPB-208ENST00000561271 SERPINB6P35237 376 aa17.32■□□□□ 0.36
CDC42BPB-208ENST00000561271 LIG3P49916 1009 aa17.32■□□□□ 0.36
CDC42BPB-208ENST00000561271 AP1S1P61966 158 aa17.32■□□□□ 0.36
CDC42BPB-208ENST00000561271 BCL2L1Q07817 233 aa17.32■□□□□ 0.36
CDC42BPB-208ENST00000561271 LRRC14Q15048 493 aa17.32■□□□□ 0.36
CDC42BPB-208ENST00000561271 WSCD2Q2TBF2 565 aa17.32■□□□□ 0.36
CDC42BPB-208ENST00000561271 SPECC1LQ69YQ0 1117 aa17.32■□□□□ 0.36
CDC42BPB-208ENST00000561271 MACC1Q6ZN28 852 aa17.32■□□□□ 0.36
CDC42BPB-208ENST00000561271 PHACTR4Q8IZ21 702 aa17.32■□□□□ 0.36
CDC42BPB-208ENST00000561271 PGBD5Q8N414 524 aa17.32■□□□□ 0.36
CDC42BPB-208ENST00000561271 LMX1AQ8TE12 382 aa17.32■□□□□ 0.36
CDC42BPB-208ENST00000561271 ZNF599Q96NL3 588 aa17.32■□□□□ 0.36
CDC42BPB-208ENST00000561271 DNAJC7Q99615 494 aa17.32■□□□□ 0.36
CDC42BPB-208ENST00000561271 CTTNBP2NLQ9P2B4 639 aa17.32■□□□□ 0.36
CDC42BPB-208ENST00000561271 APOBEC3BQ9UH17 382 aaKnown RBP17.32■□□□□ 0.36
CDC42BPB-208ENST00000561271 U3KQA8 63 aa17.32■□□□□ 0.36
CDC42BPB-208ENST00000561271 AQP9O43315 295 aa17.31■□□□□ 0.36
CDC42BPB-208ENST00000561271 LZTS3O60299 673 aaPredicted RBP17.31■□□□□ 0.36
CDC42BPB-208ENST00000561271 MAFKO60675 156 aa17.31■□□□□ 0.36
CDC42BPB-208ENST00000561271 PCCBP05166 539 aa17.31■□□□□ 0.36
CDC42BPB-208ENST00000561271 CKMT1AP12532 417 aa17.31■□□□□ 0.36
CDC42BPB-208ENST00000561271 RENBPP51606 427 aa17.31■□□□□ 0.36
CDC42BPB-208ENST00000561271 YPEL5P62699 121 aa17.31■□□□□ 0.36
CDC42BPB-208ENST00000561271 INSM1Q01101 510 aaPredicted RBP17.31■□□□□ 0.36
CDC42BPB-208ENST00000561271 CYP4F3Q08477 520 aa17.31■□□□□ 0.36
CDC42BPB-208ENST00000561271 NSUN2Q08J23 767 aaKnown RBP eCLIP17.31■□□□□ 0.36
CDC42BPB-208ENST00000561271 TARDBPQ13148 414 aaKnown RBP eCLIP17.31■□□□□ 0.36
CDC42BPB-208ENST00000561271 TRIM14Q14142 442 aa17.31■□□□□ 0.36
CDC42BPB-208ENST00000561271 PTK2BQ14289 1009 aa17.31■□□□□ 0.36
CDC42BPB-208ENST00000561271 SLC18A3Q16572 532 aa17.31■□□□□ 0.36
CDC42BPB-208ENST00000561271 DEFB133Q30KQ1 61 aa17.31■□□□□ 0.36
CDC42BPB-208ENST00000561271 PDCD7Q8N8D1 485 aaKnown RBP17.31■□□□□ 0.36
CDC42BPB-208ENST00000561271 CTNNBL1Q8WYA6 563 aaPredicted RBP17.31■□□□□ 0.36
CDC42BPB-208ENST00000561271 LRRC61Q9BV99 259 aa17.31■□□□□ 0.36
CDC42BPB-208ENST00000561271 DEF6Q9H4E7 631 aa17.31■□□□□ 0.36
CDC42BPB-208ENST00000561271 LAMA5O15230 3695 aa17.31■□□□□ 0.36
CDC42BPB-208ENST00000561271 PTPRQQ9UMZ3 2332 aa17.31■□□□□ 0.36
CDC42BPB-208ENST00000561271 TRAFD1O14545 582 aaPredicted RBP17.3■□□□□ 0.36
CDC42BPB-208ENST00000561271 PROSCO94903 275 aa17.3■□□□□ 0.36
CDC42BPB-208ENST00000561271 MAP3K6O95382 1288 aa17.3■□□□□ 0.36
CDC42BPB-208ENST00000561271 ELFN1P0C7U0 828 aa17.3■□□□□ 0.36
CDC42BPB-208ENST00000561271 IL4RP24394 825 aa17.3■□□□□ 0.36
CDC42BPB-208ENST00000561271 TAS2R40P59535 323 aa17.3■□□□□ 0.36
CDC42BPB-208ENST00000561271 MAXP61244 160 aa17.3■□□□□ 0.36
CDC42BPB-208ENST00000561271 C1orf61Q13536 156 aa17.3■□□□□ 0.36
CDC42BPB-208ENST00000561271 DPYSL3Q14195 570 aa17.3■□□□□ 0.36
CDC42BPB-208ENST00000561271 TCEA2Q15560 299 aa17.3■□□□□ 0.36
CDC42BPB-208ENST00000561271 HADHQ16836 314 aaKnown RBP17.3■□□□□ 0.36
CDC42BPB-208ENST00000561271 ASTE1Q2TB18 679 aaPredicted RBP17.3■□□□□ 0.36
CDC42BPB-208ENST00000561271 ATP13A4Q4VNC1 1196 aa17.3■□□□□ 0.36
CDC42BPB-208ENST00000561271 PRRT3Q5FWE3 981 aa17.3■□□□□ 0.36
CDC42BPB-208ENST00000561271 ZCCHC8Q6NZY4 707 aaKnown RBP17.3■□□□□ 0.36
CDC42BPB-208ENST00000561271 NYAP1Q6ZVC0 841 aa17.3■□□□□ 0.36
CDC42BPB-208ENST00000561271 VSTM4Q8IW00 320 aa17.3■□□□□ 0.36
CDC42BPB-208ENST00000561271 OR8K1Q8NGG5 319 aa17.3■□□□□ 0.36
CDC42BPB-208ENST00000561271 FAM71BQ8TC56 605 aa17.3■□□□□ 0.36
CDC42BPB-208ENST00000561271 NXPE2Q96DL1 559 aa17.3■□□□□ 0.36
CDC42BPB-208ENST00000561271 MGME1Q9BQP7 344 aa17.3■□□□□ 0.36
CDC42BPB-208ENST00000561271 DUSP23Q9BVJ7 150 aa17.3■□□□□ 0.36
CDC42BPB-208ENST00000561271 RCOR3Q9P2K3 495 aaPredicted RBP17.3■□□□□ 0.36
CDC42BPB-208ENST00000561271 UVRAGQ9P2Y5 699 aa17.3■□□□□ 0.36
CDC42BPB-208ENST00000561271 RAXQ9Y2V3 346 aa17.3■□□□□ 0.36
CDC42BPB-208ENST00000561271 OR1A2Q9Y585 309 aa17.3■□□□□ 0.36
CDC42BPB-208ENST00000561271 CACNA1GO43497 2377 aa17.29■□□□□ 0.36
CDC42BPB-208ENST00000561271 TMEM110-MUSTN1A8MSY1 372 aa17.29■□□□□ 0.36
CDC42BPB-208ENST00000561271 A8MX80 341 aa17.29■□□□□ 0.36
CDC42BPB-208ENST00000561271 GCATO75600 419 aa17.29■□□□□ 0.36
CDC42BPB-208ENST00000561271 CELA2BP08218 269 aaPredicted RBP17.29■□□□□ 0.36
CDC42BPB-208ENST00000561271 H2AFZP0C0S5 128 aa17.29■□□□□ 0.36
CDC42BPB-208ENST00000561271 CR2P20023 1033 aa17.29■□□□□ 0.36
CDC42BPB-208ENST00000561271 HSPA9P38646 679 aaKnown RBP17.29■□□□□ 0.36
CDC42BPB-208ENST00000561271 MMP13P45452 471 aa17.29■□□□□ 0.36
CDC42BPB-208ENST00000561271 ARSEP51690 589 aa17.29■□□□□ 0.36
CDC42BPB-208ENST00000561271 INPP5AQ14642 412 aa17.29■□□□□ 0.36
CDC42BPB-208ENST00000561271 FAXCQ5TGI0 409 aa17.29■□□□□ 0.36
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