RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 ZNF284Q2VY69 593 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 INAVAQ3KP66 663 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 TRIM61Q5EBN2 209 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 NAPEPLDQ6IQ20 393 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 AADACL2Q6P093 401 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 PARS2Q7L3T8 475 aaKnown RBP10.78□□□□□ -0.68
TPM1-229ENST00000561242 TRIM69Q86WT6 500 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 IPMKQ8NFU5 416 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 KIF18AQ8NI77 898 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 LRRN4Q8WUT4 740 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 BIRC7Q96CA5 298 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 KLHDC7BQ96G42 594 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 SPATA13Q96N96 652 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 OLFM3Q96PB7 478 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 FCRL5Q96RD9 977 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 TTC1Q99614 292 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 FAM118BQ9BPY3 351 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 TMEM121Q9BTD3 319 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 TUBB2BQ9BVA1 445 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 C6orf106Q9H6K1 298 aaPredicted RBP10.78□□□□□ -0.68
TPM1-229ENST00000561242 PCDH12Q9NPG4 1184 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 UBP1Q9NZI7 540 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 HACD3Q9P035 362 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 DRG1Q9Y295 367 aaKnown RBP10.78□□□□□ -0.68
TPM1-229ENST00000561242 PKP3Q9Y446 797 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 FADS3Q9Y5Q0 445 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 A0A1W2PPC4 97 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 TTC24A2A3L6 582 aaPredicted RBP10.77□□□□□ -0.69
TPM1-229ENST00000561242 C5orf60A6NFR6 353 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 IGLON5A6NGN9 336 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 A8MX80 341 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 F5H423 210 aaPredicted RBP10.77□□□□□ -0.69
TPM1-229ENST00000561242 H3BM21 787 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 CACNB4O00305 520 aaPredicted RBP10.77□□□□□ -0.69
TPM1-229ENST00000561242 PLK4O00444 970 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 WNT9AO14904 365 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 LIASO43766 372 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 MMP20O60882 483 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 ZNF821O75541 412 aaPredicted RBP10.77□□□□□ -0.69
TPM1-229ENST00000561242 URI1O94763 535 aaPredicted RBP10.77□□□□□ -0.69
TPM1-229ENST00000561242 CRTAMO95727 393 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 NDST3O95803 873 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 CER1O95813 267 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 PAK4O96013 591 aaPredicted RBP10.77□□□□□ -0.69
TPM1-229ENST00000561242 SLC4A1P02730 911 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 ITGAVP06756 1048 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 ZNF30P17039 623 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 CTPS1P17812 591 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 NFKB1P19838 968 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 HLA-DPA1P20036 260 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 ITPKAP23677 461 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 MAOBP27338 520 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 CD38P28907 300 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 ARRB1P49407 418 aaPredicted RBP10.77□□□□□ -0.69
TPM1-229ENST00000561242 ETF1P62495 437 aaKnown RBP10.77□□□□□ -0.69
TPM1-229ENST00000561242 BASP1P80723 227 aaKnown RBP10.77□□□□□ -0.69
TPM1-229ENST00000561242 SPEM2Q0P670 501 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 LRRC14Q15048 493 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 SLC14A2Q15849 920 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 ZDHHC20Q5W0Z9 365 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 SYT10Q6XYQ8 523 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 ZNF567Q8N184 647 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 ZCCHC9Q8N567 271 aaKnown RBP10.77□□□□□ -0.69
TPM1-229ENST00000561242 OXR1Q8N573 874 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 SLC25A41Q8N5S1 370 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 MNS1Q8NEH6 495 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 CCDC110Q8TBZ0 833 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 ACTRT1Q8TDG2 376 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 KLK6Q92876 244 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 SCRN2Q96FV2 425 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 GBA3Q9H227 469 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 TRABDQ9H4I3 376 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 LRRC40Q9H9A6 602 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 GDF3Q9NR23 364 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 EVA1BQ9NVM1 165 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.77□□□□□ -0.69
TPM1-229ENST00000561242 MBD1Q9UIS9 605 aaPredicted RBP10.77□□□□□ -0.69
TPM1-229ENST00000561242 MOSPD1Q9UJG1 213 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 DOLKQ9UPQ8 538 aa10.77□□□□□ -0.69
TPM1-229ENST00000561242 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.77□□□□□ -0.69
TPM1-229ENST00000561242 C1orf232A0A0U1RR37 186 aa10.76□□□□□ -0.69
TPM1-229ENST00000561242 A6NNZ2 444 aa10.76□□□□□ -0.69
TPM1-229ENST00000561242 ERI2A8K979 691 aaKnown RBP10.76□□□□□ -0.69
TPM1-229ENST00000561242 ANKRD66B4E2M5 251 aa10.76□□□□□ -0.69
TPM1-229ENST00000561242 PROB1E7EW31 1015 aa10.76□□□□□ -0.69
TPM1-229ENST00000561242 CCDC188H7C350 402 aa10.76□□□□□ -0.69
TPM1-229ENST00000561242 TOR1BO14657 336 aa10.76□□□□□ -0.69
TPM1-229ENST00000561242 RIOK3O14730 519 aaKnown RBP10.76□□□□□ -0.69
TPM1-229ENST00000561242 GCATO75600 419 aa10.76□□□□□ -0.69
TPM1-229ENST00000561242 ECEL1O95672 775 aa10.76□□□□□ -0.69
TPM1-229ENST00000561242 EPOP01588 193 aa10.76□□□□□ -0.69
TPM1-229ENST00000561242 DRD3P35462 400 aa10.76□□□□□ -0.69
TPM1-229ENST00000561242 ADCY8P40145 1251 aa10.76□□□□□ -0.69
TPM1-229ENST00000561242 ABL2P42684 1182 aa10.76□□□□□ -0.69
TPM1-229ENST00000561242 PTGER3P43115 390 aa10.76□□□□□ -0.69
TPM1-229ENST00000561242 RABIFP47224 123 aa10.76□□□□□ -0.69
TPM1-229ENST00000561242 LIG3P49916 1009 aa10.76□□□□□ -0.69
TPM1-229ENST00000561242 WNT3AP56704 352 aa10.76□□□□□ -0.69
TPM1-229ENST00000561242 ARHGAP8P85298 464 aa10.76□□□□□ -0.69
TPM1-229ENST00000561242 ZBTB17Q13105 803 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms