RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 SLC26A9Q7LBE3 791 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 CUZD1Q86UP6 607 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 PCYOX1LQ8NBM8 494 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 CENPIQ92674 756 aaPredicted RBP16.59■□□□□ 0.25
TPM1-228ENST00000560975 CCDC97Q96F63 343 aaPredicted RBP16.59■□□□□ 0.25
TPM1-228ENST00000560975 ELMO2Q96JJ3 720 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 ALPK1Q96QP1 1244 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 MCMBPQ9BTE3 642 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 LHPPQ9H008 270 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 MRPL46Q9H2W6 279 aaKnown RBP16.59■□□□□ 0.25
TPM1-228ENST00000560975 PCDH12Q9NPG4 1184 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 FZD10Q9ULW2 581 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 MTF2Q9Y483 593 aaPredicted RBP16.59■□□□□ 0.25
TPM1-228ENST00000560975 ANKRD12Q6UB98 2062 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 FAM95CA0A1B0GW59 222 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 PEX10O60683 326 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 STMN1P16949 149 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 ATICP31939 592 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 RAB10P61026 200 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 CSHL1Q14406 222 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 TMEM132BQ14DG7 1078 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 PKDCCQ504Y2 493 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 OTUD3Q5T2D3 398 aaPredicted RBP16.59■□□□□ 0.25
TPM1-228ENST00000560975 PIWIL4Q7Z3Z4 852 aaKnown RBP16.59■□□□□ 0.25
TPM1-228ENST00000560975 FUNDC1Q8IVP5 155 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 ZNF280CQ8ND82 737 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 STARD8Q92502 1023 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 SNX27Q96L92 541 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 CCDC138Q96M89 665 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 C11orf84Q9BUA3 381 aaPredicted RBP16.59■□□□□ 0.25
TPM1-228ENST00000560975 BEGAINQ9BUH8 593 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 EIF2AQ9BY44 585 aaKnown RBP16.59■□□□□ 0.25
TPM1-228ENST00000560975 RAD21L1Q9H4I0 556 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 TMEM9Q9P0T7 183 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 NME7Q9Y5B8 376 aa16.59■□□□□ 0.25
TPM1-228ENST00000560975 BPTFQ12830 3046 aa16.58■□□□□ 0.25
TPM1-228ENST00000560975 IQCA1LA6NCM1 817 aa16.58■□□□□ 0.25
TPM1-228ENST00000560975 TRIM64BA6NI03 449 aa16.58■□□□□ 0.25
TPM1-228ENST00000560975 NFKB1P19838 968 aa16.58■□□□□ 0.25
TPM1-228ENST00000560975 RPS9P46781 194 aaKnown RBP16.58■□□□□ 0.25
TPM1-228ENST00000560975 HLCSP50747 726 aa16.58■□□□□ 0.25
TPM1-228ENST00000560975 DNASE1L3Q13609 305 aa16.58■□□□□ 0.25
TPM1-228ENST00000560975 TMEM132DQ14C87 1099 aa16.58■□□□□ 0.25
TPM1-228ENST00000560975 PGS1Q32NB8 556 aa16.58■□□□□ 0.25
TPM1-228ENST00000560975 ANKRD13AQ8IZ07 590 aa16.58■□□□□ 0.25
TPM1-228ENST00000560975 ABHD11Q8NFV4 315 aa16.58■□□□□ 0.25
TPM1-228ENST00000560975 ADNPQ9H2P0 1102 aa16.58■□□□□ 0.25
TPM1-228ENST00000560975 DPEP3Q9H4B8 488 aa16.58■□□□□ 0.25
TPM1-228ENST00000560975 RNF19AQ9NV58 838 aa16.58■□□□□ 0.25
TPM1-228ENST00000560975 SEPT3Q9UH03 358 aa16.58■□□□□ 0.25
TPM1-228ENST00000560975 PSME2Q9UL46 239 aa16.58■□□□□ 0.25
TPM1-228ENST00000560975 IGKV6D-21A0A0A0MT36 114 aa16.58■□□□□ 0.24
TPM1-228ENST00000560975 FARP2O94887 1054 aaPredicted RBP16.58■□□□□ 0.24
TPM1-228ENST00000560975 PABPC1P11940 636 aaKnown RBP16.58■□□□□ 0.24
TPM1-228ENST00000560975 GRSF1Q12849 480 aaKnown RBP eCLIP16.58■□□□□ 0.24
TPM1-228ENST00000560975 SLC10A6Q3KNW5 377 aa16.58■□□□□ 0.24
TPM1-228ENST00000560975 TMTC4Q5T4D3 741 aa16.58■□□□□ 0.24
TPM1-228ENST00000560975 FAM160B1Q5W0V3 765 aa16.58■□□□□ 0.24
TPM1-228ENST00000560975 ADGRG5Q8IZF4 528 aa16.58■□□□□ 0.24
TPM1-228ENST00000560975 DEFB106AQ8N104 65 aa16.58■□□□□ 0.24
TPM1-228ENST00000560975 PDZD8Q8NEN9 1154 aa16.58■□□□□ 0.24
TPM1-228ENST00000560975 MUS81Q96NY9 551 aa16.58■□□□□ 0.24
TPM1-228ENST00000560975 TDRD1Q9BXT4 1180 aaKnown RBP16.58■□□□□ 0.24
TPM1-228ENST00000560975 C2orf40Q9H1Z8 148 aa16.58■□□□□ 0.24
TPM1-228ENST00000560975 SNX25Q9H3E2 840 aa16.58■□□□□ 0.24
TPM1-228ENST00000560975 MEAF6Q9HAF1 191 aa16.58■□□□□ 0.24
TPM1-228ENST00000560975 LRRC4Q9HBW1 653 aa16.58■□□□□ 0.24
TPM1-228ENST00000560975 CD320Q9NPF0 282 aa16.58■□□□□ 0.24
TPM1-228ENST00000560975 DPP3Q9NY33 737 aa16.58■□□□□ 0.24
TPM1-228ENST00000560975 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.58■□□□□ 0.24
TPM1-228ENST00000560975 ZNF214Q9UL59 606 aaPredicted RBP16.58■□□□□ 0.24
TPM1-228ENST00000560975 KIAA1257Q9ULG3 409 aa16.58■□□□□ 0.24
TPM1-228ENST00000560975 GNL1P36915 607 aaPredicted RBP16.57■□□□□ 0.24
TPM1-228ENST00000560975 TMBIM6P55061 237 aa16.57■□□□□ 0.24
TPM1-228ENST00000560975 TAS2R39P59534 338 aa16.57■□□□□ 0.24
TPM1-228ENST00000560975 STX1BP61266 288 aa16.57■□□□□ 0.24
TPM1-228ENST00000560975 SPCS2Q15005 226 aa16.57■□□□□ 0.24
TPM1-228ENST00000560975 OXA1LQ15070 435 aa16.57■□□□□ 0.24
TPM1-228ENST00000560975 KCNJ8Q15842 424 aa16.57■□□□□ 0.24
TPM1-228ENST00000560975 CCNYL2Q5T2Q4 361 aa16.57■□□□□ 0.24
TPM1-228ENST00000560975 C8orf82Q6P1X6 216 aaPredicted RBP16.57■□□□□ 0.24
TPM1-228ENST00000560975 SPRED1Q7Z699 444 aa16.57■□□□□ 0.24
TPM1-228ENST00000560975 PNPLA1Q8N8W4 532 aa16.57■□□□□ 0.24
TPM1-228ENST00000560975 USP33Q8TEY7 942 aa16.57■□□□□ 0.24
TPM1-228ENST00000560975 C17orf50Q8WW18 174 aa16.57■□□□□ 0.24
TPM1-228ENST00000560975 SEPHS2Q99611 448 aa16.57■□□□□ 0.24
TPM1-228ENST00000560975 TRIM15Q9C019 465 aa16.57■□□□□ 0.24
TPM1-228ENST00000560975 FZD8Q9H461 694 aa16.57■□□□□ 0.24
TPM1-228ENST00000560975 SETD4Q9NVD3 440 aa16.57■□□□□ 0.24
TPM1-228ENST00000560975 MAP10Q9P2G4 905 aa16.57■□□□□ 0.24
TPM1-228ENST00000560975 COL11A2P13942 1736 aaPredicted RBP16.57■□□□□ 0.24
TPM1-228ENST00000560975 ARPC2O15144 300 aa16.57■□□□□ 0.24
TPM1-228ENST00000560975 CD68P34810 354 aaPredicted RBP16.57■□□□□ 0.24
TPM1-228ENST00000560975 HPCAL1P37235 193 aa16.57■□□□□ 0.24
TPM1-228ENST00000560975 CSRP3P50461 194 aa16.57■□□□□ 0.24
TPM1-228ENST00000560975 PIGFQ07326 219 aa16.57■□□□□ 0.24
TPM1-228ENST00000560975 FAM83EQ2M2I3 478 aa16.57■□□□□ 0.24
TPM1-228ENST00000560975 TBPL2Q6SJ96 375 aa16.57■□□□□ 0.24
TPM1-228ENST00000560975 OR6B3Q8NGW1 331 aa16.57■□□□□ 0.24
TPM1-228ENST00000560975 ZUFSPQ96AP4 578 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms