RNA–Protein interactions for RNA: ENST00000560952.1

RNF111-211, Transcript of ring finger protein 111, humanhuman

TSL 1 (best)

Gene RNF111, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-211ENST00000560952 ATP2A1O14983 1001 aa2.56□□□□□ -2
RNF111-211ENST00000560952 OPHN1O60890 802 aa2.56□□□□□ -2
RNF111-211ENST00000560952 FZD7O75084 574 aa2.56□□□□□ -2
RNF111-211ENST00000560952 DNAJB6O75190 326 aa2.56□□□□□ -2
RNF111-211ENST00000560952 CDC123O75794 336 aaPredicted RBP2.56□□□□□ -2
RNF111-211ENST00000560952 IPO13O94829 963 aaKnown RBP2.56□□□□□ -2
RNF111-211ENST00000560952 HEXIM1O94992 359 aaKnown RBP2.56□□□□□ -2
RNF111-211ENST00000560952 APOL3O95236 402 aa2.56□□□□□ -2
RNF111-211ENST00000560952 TNFRSF6BO95407 300 aa2.56□□□□□ -2
RNF111-211ENST00000560952 PIGNO95427 931 aa2.56□□□□□ -2
RNF111-211ENST00000560952 SCGB1D1O95968 90 aa2.56□□□□□ -2
RNF111-211ENST00000560952 ALDH2P05091 517 aa2.56□□□□□ -2
RNF111-211ENST00000560952 ACAA1P09110 424 aaPredicted RBP2.56□□□□□ -2
RNF111-211ENST00000560952 CSF1P09603 554 aa2.56□□□□□ -2
RNF111-211ENST00000560952 CKMT2P17540 419 aa2.56□□□□□ -2
RNF111-211ENST00000560952 TACR2P21452 398 aa2.56□□□□□ -2
RNF111-211ENST00000560952 NR2F2P24468 414 aa2.56□□□□□ -2
RNF111-211ENST00000560952 PTX3P26022 381 aaPredicted RBP2.56□□□□□ -2
RNF111-211ENST00000560952 U2AF2P26368 475 aaKnown RBP eCLIP2.56□□□□□ -2
RNF111-211ENST00000560952 MSX2P35548 267 aaPredicted RBP2.56□□□□□ -2
RNF111-211ENST00000560952 SERPINF1P36955 418 aa2.56□□□□□ -2
RNF111-211ENST00000560952 PTGER3P43115 390 aa2.56□□□□□ -2
RNF111-211ENST00000560952 CLCNKAP51800 687 aa2.56□□□□□ -2
RNF111-211ENST00000560952 GSDMDP57764 484 aa2.56□□□□□ -2
RNF111-211ENST00000560952 BPIFB4P59827 614 aa2.56□□□□□ -2
RNF111-211ENST00000560952 SMAD3P84022 425 aaKnown RBP2.56□□□□□ -2
RNF111-211ENST00000560952 ZXDAP98168 799 aa2.56□□□□□ -2
RNF111-211ENST00000560952 ROR2Q01974 943 aaKnown RBP2.56□□□□□ -2
RNF111-211ENST00000560952 UBE3AQ05086 875 aa2.56□□□□□ -2
RNF111-211ENST00000560952 PPATQ06203 517 aa2.56□□□□□ -2
RNF111-211ENST00000560952 ENPEPQ07075 957 aa2.56□□□□□ -2
RNF111-211ENST00000560952 GPM6BQ13491 265 aa2.56□□□□□ -2
RNF111-211ENST00000560952 THOC5Q13769 683 aaKnown RBP2.56□□□□□ -2
RNF111-211ENST00000560952 DDX39BQ13838 428 aaKnown RBP2.56□□□□□ -2
RNF111-211ENST00000560952 MORF4L2Q15014 288 aa2.56□□□□□ -2
RNF111-211ENST00000560952 RPS6KA2Q15349 733 aa2.56□□□□□ -2
RNF111-211ENST00000560952 SGCAQ16586 387 aa2.56□□□□□ -2
RNF111-211ENST00000560952 TBR1Q16650 682 aa2.56□□□□□ -2
RNF111-211ENST00000560952 KYAT1Q16773 422 aa2.56□□□□□ -2
RNF111-211ENST00000560952 SLC35G1Q2M3R5 365 aa2.56□□□□□ -2
RNF111-211ENST00000560952 SMTNL2Q2TAL5 461 aa2.56□□□□□ -2
RNF111-211ENST00000560952 ANKRD20A4Q4UJ75 823 aa2.56□□□□□ -2
RNF111-211ENST00000560952 GLE1Q53GS7 698 aaKnown RBP2.56□□□□□ -2
RNF111-211ENST00000560952 ANKRD20A8PQ5CZ79 823 aa2.56□□□□□ -2
RNF111-211ENST00000560952 ANKRD20A2Q5SQ80 823 aa2.56□□□□□ -2
RNF111-211ENST00000560952 TTC22Q5TAA0 569 aa2.56□□□□□ -2
RNF111-211ENST00000560952 ZNF658Q5TYW1 1059 aaPredicted RBP2.56□□□□□ -2
RNF111-211ENST00000560952 ANKRD20A1Q5TYW2 823 aa2.56□□□□□ -2
RNF111-211ENST00000560952 ANKRD20A3Q5VUR7 823 aa2.56□□□□□ -2
RNF111-211ENST00000560952 ZNF772Q68DY9 489 aaPredicted RBP2.56□□□□□ -2
RNF111-211ENST00000560952 ESRP1Q6NXG1 681 aaKnown RBP2.56□□□□□ -2
RNF111-211ENST00000560952 METTL2BQ6P1Q9 378 aaKnown RBP2.56□□□□□ -2
RNF111-211ENST00000560952 CASC4Q6P4E1 433 aa2.56□□□□□ -2
RNF111-211ENST00000560952 FOXR2Q6PJQ5 311 aa2.56□□□□□ -2
RNF111-211ENST00000560952 STXBP4Q6ZWJ1 553 aa2.56□□□□□ -2
RNF111-211ENST00000560952 PXKQ7Z7A4 578 aa2.56□□□□□ -2
RNF111-211ENST00000560952 CLEC14AQ86T13 490 aa2.56□□□□□ -2
RNF111-211ENST00000560952 KBTBD6Q86V97 674 aa2.56□□□□□ -2
RNF111-211ENST00000560952 MON1AQ86VX9 555 aa2.56□□□□□ -2
RNF111-211ENST00000560952 LRRC6Q86X45 466 aa2.56□□□□□ -2
RNF111-211ENST00000560952 HERC6Q8IVU3 1022 aa2.56□□□□□ -2
RNF111-211ENST00000560952 MAP7D3Q8IWC1 876 aa2.56□□□□□ -2
RNF111-211ENST00000560952 CNTN4Q8IWV2 1026 aa2.56□□□□□ -2
RNF111-211ENST00000560952 SRRM1Q8IYB3 904 aaKnown RBP2.56□□□□□ -2
RNF111-211ENST00000560952 CCDC105Q8IYK2 499 aa2.56□□□□□ -2
RNF111-211ENST00000560952 BCL6BQ8N143 479 aaPredicted RBP2.56□□□□□ -2
RNF111-211ENST00000560952 MIER2Q8N344 545 aa2.56□□□□□ -2
RNF111-211ENST00000560952 CCNYL1Q8N7R7 359 aa2.56□□□□□ -2
RNF111-211ENST00000560952 OR10H5Q8NGA6 315 aa2.56□□□□□ -2
RNF111-211ENST00000560952 AKR7LQ8NHP1 331 aa2.56□□□□□ -2
RNF111-211ENST00000560952 ZNF384Q8TF68 577 aa2.56□□□□□ -2
RNF111-211ENST00000560952 DDX17Q92841 729 aaKnown RBP2.56□□□□□ -2
RNF111-211ENST00000560952 MUL1Q969V5 352 aa2.56□□□□□ -2
RNF111-211ENST00000560952 IQCDQ96DY2 449 aa2.56□□□□□ -2
RNF111-211ENST00000560952 SPDL1Q96EA4 605 aa2.56□□□□□ -2
RNF111-211ENST00000560952 PPP1R36Q96LQ0 422 aa2.56□□□□□ -2
RNF111-211ENST00000560952 PANX2Q96RD6 677 aa2.56□□□□□ -2
RNF111-211ENST00000560952 OSBPL9Q96SU4 736 aa2.56□□□□□ -2
RNF111-211ENST00000560952 P2RX7Q99572 595 aaKnown RBP2.56□□□□□ -2
RNF111-211ENST00000560952 RAD9AQ99638 391 aa2.56□□□□□ -2
RNF111-211ENST00000560952 CINPQ9BW66 212 aaPredicted RBP2.56□□□□□ -2
RNF111-211ENST00000560952 TBC1D10AQ9BXI6 508 aa2.56□□□□□ -2
RNF111-211ENST00000560952 GPR61Q9BZJ8 451 aa2.56□□□□□ -2
RNF111-211ENST00000560952 MTG2Q9H4K7 406 aa2.56□□□□□ -2
RNF111-211ENST00000560952 ZMAT4Q9H898 229 aa2.56□□□□□ -2
RNF111-211ENST00000560952 COQ10BQ9H8M1 238 aa2.56□□□□□ -2
RNF111-211ENST00000560952 C17orf75Q9HAS0 396 aa2.56□□□□□ -2
RNF111-211ENST00000560952 PARVBQ9HBI1 364 aa2.56□□□□□ -2
RNF111-211ENST00000560952 TREM1Q9NP99 234 aa2.56□□□□□ -2
RNF111-211ENST00000560952 GJB4Q9NTQ9 266 aa2.56□□□□□ -2
RNF111-211ENST00000560952 AGPAT5Q9NUQ2 364 aa2.56□□□□□ -2
RNF111-211ENST00000560952 DDX43Q9NXZ2 648 aaKnown RBP2.56□□□□□ -2
RNF111-211ENST00000560952 SMPD3Q9NY59 655 aaPredicted RBP2.56□□□□□ -2
RNF111-211ENST00000560952 TAB2Q9NYJ8 693 aa2.56□□□□□ -2
RNF111-211ENST00000560952 TMOD3Q9NYL9 352 aa2.56□□□□□ -2
RNF111-211ENST00000560952 MIS18AQ9NYP9 233 aa2.56□□□□□ -2
RNF111-211ENST00000560952 PKD2L2Q9NZM6 624 aa2.56□□□□□ -2
RNF111-211ENST00000560952 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.56□□□□□ -2
RNF111-211ENST00000560952 STX18Q9P2W9 335 aaKnown RBP2.56□□□□□ -2
RNF111-211ENST00000560952 MSRAQ9UJ68 235 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms