RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 GAS8O95995 478 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 GSRP00390 522 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 KRT14P02533 472 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 APODP05090 189 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 HLA-DQB2P05538 268 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 ZSCAN5DPP0CG00 497 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 CHRNB1P11230 501 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 SRCP12931 536 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 POLR2EP19388 210 aaKnown RBP5.54□□□□□ -1.52
ZEB1-220ENST00000560909 SP100P23497 879 aaPredicted RBP5.54□□□□□ -1.52
ZEB1-220ENST00000560909 ADRA1AP35348 466 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 FDFT1P37268 417 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 MMP13P45452 471 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 MAPK8P45983 427 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 SOX9P48436 509 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 NRLP54845 237 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 MRPS21P82921 87 aaKnown RBP5.54□□□□□ -1.52
ZEB1-220ENST00000560909 DR1Q01658 176 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 C2orf54Q08AI8 447 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 NIPAL4Q0D2K0 466 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 AP1B1Q10567 949 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 MSLNQ13421 630 aaPredicted RBP5.54□□□□□ -1.52
ZEB1-220ENST00000560909 KCNJ11Q14654 390 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 DLG2Q15700 870 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 MLF2Q15773 248 aaPredicted RBP5.54□□□□□ -1.52
ZEB1-220ENST00000560909 HNRNPA1L2Q32P51 320 aaKnown RBP5.54□□□□□ -1.52
ZEB1-220ENST00000560909 DNTTIP2Q5QJE6 756 aaKnown RBP5.54□□□□□ -1.52
ZEB1-220ENST00000560909 C9orf64Q5T6V5 341 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 RNASEH2BQ5TBB1 312 aaKnown RBP5.54□□□□□ -1.52
ZEB1-220ENST00000560909 ARMC3Q5W041 872 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 NCEH1Q6PIU2 408 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 KDELC1Q6UW63 502 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 PRPF39Q86UA1 669 aaKnown RBP5.54□□□□□ -1.52
ZEB1-220ENST00000560909 SFTPA1Q8IWL2 248 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 KLHL7Q8IXQ5 586 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 GJD3Q8N144 294 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 CCDC33Q8N5R6 958 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 PCDH20Q8N6Y1 951 aaKnown RBP5.54□□□□□ -1.52
ZEB1-220ENST00000560909 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.54□□□□□ -1.52
ZEB1-220ENST00000560909 TSEN2Q8NCE0 465 aaKnown RBP5.54□□□□□ -1.52
ZEB1-220ENST00000560909 MCUQ8NE86 351 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 TTC16Q8NEE8 873 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 CCDC110Q8TBZ0 833 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 HCAR2Q8TDS4 363 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 USP33Q8TEY7 942 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 EXOC4Q96A65 974 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 CLDN23Q96B33 292 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 ECHDC3Q96DC8 303 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 OXNAD1Q96HP4 312 aaPredicted RBP5.54□□□□□ -1.52
ZEB1-220ENST00000560909 PPP1R2P1Q96PQ5 205 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 NUDCD1Q96RS6 583 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 NELL2Q99435 816 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 GABRG3Q99928 467 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 FERMT1Q9BQL6 677 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 CPEB1Q9BZB8 566 aaKnown RBP5.54□□□□□ -1.52
ZEB1-220ENST00000560909 FAM129AQ9BZQ8 928 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 MRPL18Q9H0U6 180 aaKnown RBP5.54□□□□□ -1.52
ZEB1-220ENST00000560909 GBA3Q9H227 469 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 SP110Q9HB58 689 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 ARNT2Q9HBZ2 717 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 GDF3Q9NR23 364 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 EIF2B3Q9NR50 452 aaKnown RBP5.54□□□□□ -1.52
ZEB1-220ENST00000560909 HEBP1Q9NRV9 189 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 ZDHHC18Q9NUE0 388 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 GRHL1Q9NZI5 618 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 WHRNQ9P202 907 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 DMGDHQ9UI17 866 aaKnown RBP5.54□□□□□ -1.52
ZEB1-220ENST00000560909 PPIL1Q9Y3C6 166 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 ACTL7AQ9Y615 435 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 CUL9Q8IWT3 2517 aa5.53□□□□□ -1.52
ZEB1-220ENST00000560909 MYO18AQ92614 2054 aaKnown RBP5.53□□□□□ -1.52
ZEB1-220ENST00000560909 LOC285095A0A1B0GVY8 99 aa5.53□□□□□ -1.52
ZEB1-220ENST00000560909 TSPAN11A1L157 253 aa5.53□□□□□ -1.52
ZEB1-220ENST00000560909 TBC1D3BA6NDS4 549 aa5.53□□□□□ -1.52
ZEB1-220ENST00000560909 SGK1O00141 431 aa5.53□□□□□ -1.52
ZEB1-220ENST00000560909 TRAFD1O14545 582 aaPredicted RBP5.53□□□□□ -1.52
ZEB1-220ENST00000560909 DNALI1O14645 258 aaPredicted RBP5.53□□□□□ -1.52
ZEB1-220ENST00000560909 NDC80O14777 642 aa5.53□□□□□ -1.52
ZEB1-220ENST00000560909 ALOX15BO15296 676 aa5.53□□□□□ -1.52
ZEB1-220ENST00000560909 INSIG1O15503 277 aa5.53□□□□□ -1.52
ZEB1-220ENST00000560909 PSMD3O43242 534 aa5.53□□□□□ -1.52
ZEB1-220ENST00000560909 FZD6O60353 706 aa5.53□□□□□ -1.52
ZEB1-220ENST00000560909 ANXA9O76027 345 aa5.53□□□□□ -1.52
ZEB1-220ENST00000560909 STK10O94804 968 aaKnown RBP5.53□□□□□ -1.52
ZEB1-220ENST00000560909 SEC31AO94979 1220 aaKnown RBP5.53□□□□□ -1.52
ZEB1-220ENST00000560909 POP4O95707 220 aaKnown RBP5.53□□□□□ -1.52
ZEB1-220ENST00000560909 EGFP01133 1207 aa5.53□□□□□ -1.52
ZEB1-220ENST00000560909 PRLP01236 227 aa5.53□□□□□ -1.52
ZEB1-220ENST00000560909 TUBBP07437 444 aa5.53□□□□□ -1.52
ZEB1-220ENST00000560909 ETS1P14921 441 aa5.53□□□□□ -1.52
ZEB1-220ENST00000560909 ITIH2P19823 946 aa5.53□□□□□ -1.52
ZEB1-220ENST00000560909 TPSB2P20231 275 aa5.53□□□□□ -1.52
ZEB1-220ENST00000560909 PSMA3P25788 255 aa5.53□□□□□ -1.52
ZEB1-220ENST00000560909 TNFRSF8P28908 595 aa5.53□□□□□ -1.52
ZEB1-220ENST00000560909 ECHS1P30084 290 aa5.53□□□□□ -1.52
ZEB1-220ENST00000560909 MAGEA3P43357 314 aa5.53□□□□□ -1.52
ZEB1-220ENST00000560909 RPL21P46778 160 aaKnown RBP5.53□□□□□ -1.52
ZEB1-220ENST00000560909 RGRP47804 291 aa5.53□□□□□ -1.52
ZEB1-220ENST00000560909 STK19P49842 368 aaPredicted RBP5.53□□□□□ -1.52
ZEB1-220ENST00000560909 PSMA6P60900 246 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms