RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 N4BP2L1Q5TBK1 243 aaPredicted RBP10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 GKAP1Q5VSY0 366 aaPredicted RBP10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 CES4AQ5XG92 561 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 RAPH1Q70E73 1250 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 ZC3HC1Q86WB0 502 aaKnown RBP10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 GPATCH11Q8N954 259 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 NAT14Q8WUY8 206 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 RSPRY1Q96DX4 576 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 ERLEC1Q96DZ1 483 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 PPP1R2P1Q96PQ5 205 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 SSU72Q9NP77 194 aaKnown RBP10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 TMEM216Q9P0N5 145 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 TM9SF1O15321 606 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 LINC01565O15544 149 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 CYBBP04839 570 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 TYRP14679 529 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 SERPINB4P48594 390 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 PRAMEP78395 509 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 FUT11Q495W5 492 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 TCEAL5Q5H9L2 206 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 DGKKQ5KSL6 1271 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 RBM20Q5T481 1227 aaKnown RBP10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 ALG1LQ6GMV1 187 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 NEPROQ6NW34 567 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 CEP97Q8IW35 865 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 CCDC117Q8IWD4 279 aaPredicted RBP10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 ADGRG2Q8IZP9 1017 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 CPXM2Q8N436 756 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 PAF1Q8N7H5 531 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 FEM1CQ96JP0 617 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 PRKAG3Q9UGI9 489 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 SLCO3A1Q9UIG8 710 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 EMCNQ9ULC0 261 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 PHTF1Q9UMS5 762 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 CRYL1Q9Y2S2 319 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 USP34Q70CQ2 3546 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 HELZP42694 1942 aaKnown RBP10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 C2orf16Q68DN1 1984 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 A0A096LPK6 155 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 MROH6A6NGR9 719 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 NDST3O95803 873 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 CCNFP41002 786 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 GLRBP48167 497 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 CDKN1CP49918 316 aaPredicted RBP10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 USP10Q14694 798 aaKnown RBP10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 ZNF77Q15935 545 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 GLIPR1L2Q4G1C9 344 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 LRRC73Q5JTD7 316 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 RARS2Q5T160 578 aaKnown RBP10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 GLT6D1Q7Z4J2 308 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 DCAF4L2Q8NA75 395 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 OR4K2Q8NGD2 314 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 FIBINQ8TAL6 211 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 TTC8Q8TAM2 541 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 IRF7Q92985 503 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 CABS1Q96KC9 395 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 NUDCD1Q96RS6 583 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 C2orf49Q9BVC5 232 aaPredicted RBP10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 MANSC1Q9H8J5 431 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 SPHK2Q9NRA0 654 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 KIAA1522Q9P206 1035 aaPredicted RBP10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 ZNF510Q9Y2H8 683 aa10.94□□□□□ -0.66
SNRPA1-211ENST00000560433 ANKRD66B4E2M5 251 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 ZNF821O75541 412 aaPredicted RBP10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 GOT2P00505 430 aaKnown RBP10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 FGF1P05230 155 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 C2P06681 752 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 PAMP19021 973 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 HLA-DPA1P20036 260 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 SLC18A1P54219 525 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 MESP2Q0VG99 397 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 SEMA3AQ14563 771 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 RFTN1Q14699 578 aaPredicted RBP10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 PITRM1Q5JRX3 1037 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 KIAA0930Q6ICG6 404 aaPredicted RBP10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 NCEH1Q6PIU2 408 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 TIFABQ6ZNK6 161 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 PIGWQ7Z7B1 504 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 ZNF366Q8N895 744 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 CYB5D2Q8WUJ1 264 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 MCMBPQ9BTE3 642 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 MTG2Q9H4K7 406 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 FAM96AQ9H5X1 160 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 SLC28A3Q9HAS3 691 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 CPSF2Q9P2I0 782 aaKnown RBP10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 FBXO5Q9UKT4 447 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 CCDC162PA2VCL2 907 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 SNX3O60493 162 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 HNRNPA1P09651 372 aaKnown RBP eCLIP10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 DHRS4L1P0CG22 281 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 CNTFP26441 200 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 CRHR1P34998 444 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 EPHB1P54762 984 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 TMEM215Q68D42 235 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 GET4Q7L5D6 327 aaPredicted RBP10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 OTOAQ7RTW8 1153 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 CACNA2D3Q8IZS8 1091 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 BRSK1Q8TDC3 778 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 ASIC4Q96FT7 647 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 ELMO2Q96JJ3 720 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms