RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 YBEYP58557 167 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-214ENST00000560402 ERVPABLB-1P60509 514 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 GRM3Q14832 879 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 MYLK3Q32MK0 819 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 PARP15Q460N3 678 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 FAM72AQ5TYM5 149 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 FAM72DQ6L9T8 149 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 ALKBH5Q6P6C2 394 aaKnown RBP13.73□□□□□ -0.21
SMAD3-214ENST00000560402 IGF2-ASQ6U949 168 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 H2AFVQ71UI9 128 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 SLFN11Q7Z7L1 901 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 FAM72BQ86X60 149 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 PHF13Q86YI8 300 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-214ENST00000560402 CCDC185Q8N715 623 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 OR6K2Q8NGY2 324 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 SLC30A5Q8TAD4 765 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 WDR48Q8TAF3 677 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 IFI44Q8TCB0 444 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 MAPK15Q8TD08 544 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 KLHL32Q96NJ5 620 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 FCRL3Q96P31 734 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-214ENST00000560402 LGMNQ99538 433 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 EPAS1Q99814 870 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 ABCG4Q9H172 646 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 CATSPERBQ9H7T0 1116 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 ARGLU1Q9NWB6 273 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-214ENST00000560402 ADAM22Q9P0K1 906 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 SPASTQ9UBP0 616 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 APOBEC3BQ9UH17 382 aaKnown RBP13.73□□□□□ -0.21
SMAD3-214ENST00000560402 MFHAS1Q9Y4C4 1052 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 PCDHB1Q9Y5F3 818 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 ACTL7AQ9Y615 435 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 SAR1BQ9Y6B6 198 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 ANKRD36A6QL64 1941 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 A0A087X0T9 212 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 WASH4PA8MWX3 477 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 ATXN7O15265 892 aaPredicted RBP13.72□□□□□ -0.21
SMAD3-214ENST00000560402 FGF10O15520 208 aaPredicted RBP13.72□□□□□ -0.21
SMAD3-214ENST00000560402 SPINT1O43278 529 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 BUB1O43683 1085 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 CSO75390 466 aaKnown RBP13.72□□□□□ -0.21
SMAD3-214ENST00000560402 NEBLO76041 1014 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 TM7SF2O76062 418 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 FAM228BP0C875 321 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 JUNDP17535 347 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 TCP1P17987 556 aaKnown RBP13.72□□□□□ -0.21
SMAD3-214ENST00000560402 EPHB2P29323 1055 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 GKP32189 559 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 RFC1P35251 1148 aaPredicted RBP13.72□□□□□ -0.21
SMAD3-214ENST00000560402 IGFALSP35858 605 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 LSSP48449 732 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 RPIAP49247 311 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 UCNP55089 124 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 RHOAP61586 193 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 GABREP78334 506 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 C1QBPQ07021 282 aaKnown RBP13.72□□□□□ -0.21
SMAD3-214ENST00000560402 ELP6Q0PNE2 266 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 CLEC16AQ2KHT3 1053 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 RAB6CQ53S08 254 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 ZNF542PQ5EBM4 170 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 DNAJC24Q6P3W2 148 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 GDPD4Q6W3E5 623 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 MACC1Q6ZN28 852 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 MON1BQ7L1V2 547 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 GPR155Q7Z3F1 870 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 ZNF354CQ86Y25 554 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 CXorf40AQ8TE69 158 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 NAT6Q93015 286 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 IL12RB2Q99665 862 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 CARD6Q9BX69 1037 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 LACRTQ9GZZ8 138 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 RAB6CQ9H0N0 254 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 POLR1BQ9H9Y6 1135 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 GGT7Q9UJ14 662 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 ITM2BQ9Y287 266 aa13.72□□□□□ -0.21
SMAD3-214ENST00000560402 ASXL3Q9C0F0 2248 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 A0A0A6YYK5 440 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-214ENST00000560402 CTAGE15A4D2H0 777 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 EME2A4GXA9 379 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-214ENST00000560402 SIGLEC16A6NMB1 481 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 USP12O75317 370 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 TCEA3O75764 348 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 CTAGE8P0CG41 777 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 BLKP51451 505 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 ZNF143P52747 638 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-214ENST00000560402 TLE3Q04726 772 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 EIF2B5Q13144 721 aaKnown RBP13.71□□□□□ -0.21
SMAD3-214ENST00000560402 NR0B2Q15466 257 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 C6orf132Q5T0Z8 1188 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 ATXN7L2Q5T6C5 722 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-214ENST00000560402 BROXQ5VW32 411 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 CCDC70Q6NSX1 233 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 PPP1R2P3Q6NXS1 205 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 ZNF571Q7Z3V5 609 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-214ENST00000560402 CTAGE6Q86UF2 777 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 CTAGE4Q8IX94 777 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 SPACA3Q8IXA5 215 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 PHACTR4Q8IZ21 702 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 SYCE1Q8N0S2 351 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 HCAR2Q8TDS4 363 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms