RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 ATP13A3Q9H7F0 1226 aa15.31■□□□□ 0.04
SNRPA1-210ENST00000560383 FZD3Q9NPG1 666 aa15.31■□□□□ 0.04
SNRPA1-210ENST00000560383 SCUBE2Q9NQ36 999 aa15.31■□□□□ 0.04
SNRPA1-210ENST00000560383 KLHL11Q9NVR0 708 aa15.31■□□□□ 0.04
SNRPA1-210ENST00000560383 RALYQ9UKM9 306 aaKnown RBP15.31■□□□□ 0.04
SNRPA1-210ENST00000560383 TRPM6Q9BX84 2022 aa15.31■□□□□ 0.04
SNRPA1-210ENST00000560383 CACNA1GO43497 2377 aa15.31■□□□□ 0.04
SNRPA1-210ENST00000560383 TRABD2BA6NFA1 517 aa15.3■□□□□ 0.04
SNRPA1-210ENST00000560383 C3orf70A6NLC5 250 aaPredicted RBP15.3■□□□□ 0.04
SNRPA1-210ENST00000560383 TMEM110-MUSTN1A8MSY1 372 aa15.3■□□□□ 0.04
SNRPA1-210ENST00000560383 NEMP1O14524 444 aa15.3■□□□□ 0.04
SNRPA1-210ENST00000560383 TRAFD1O14545 582 aaPredicted RBP15.3■□□□□ 0.04
SNRPA1-210ENST00000560383 RAD51BO15315 384 aa15.3■□□□□ 0.04
SNRPA1-210ENST00000560383 MFSD11O43934 449 aa15.3■□□□□ 0.04
SNRPA1-210ENST00000560383 THEGLP0DJG4 465 aa15.3■□□□□ 0.04
SNRPA1-210ENST00000560383 CKMT2P17540 419 aa15.3■□□□□ 0.04
SNRPA1-210ENST00000560383 SERPINA4P29622 427 aa15.3■□□□□ 0.04
SNRPA1-210ENST00000560383 GJC1P36383 396 aa15.3■□□□□ 0.04
SNRPA1-210ENST00000560383 GARSP41250 739 aaKnown RBP15.3■□□□□ 0.04
SNRPA1-210ENST00000560383 ELP6Q0PNE2 266 aa15.3■□□□□ 0.04
SNRPA1-210ENST00000560383 BNIP3Q12983 259 aa15.3■□□□□ 0.04
SNRPA1-210ENST00000560383 RALGPS1Q5JS13 557 aa15.3■□□□□ 0.04
SNRPA1-210ENST00000560383 KYAT3Q6YP21 454 aaKnown RBP15.3■□□□□ 0.04
SNRPA1-210ENST00000560383 ZSWIM9Q86XI8 627 aa15.3■□□□□ 0.04
SNRPA1-210ENST00000560383 PGBD5Q8N414 524 aa15.3■□□□□ 0.04
SNRPA1-210ENST00000560383 TEX26Q8N6G2 289 aa15.3■□□□□ 0.04
SNRPA1-210ENST00000560383 CENPTQ96BT3 561 aa15.3■□□□□ 0.04
SNRPA1-210ENST00000560383 TSGA13Q96PP4 275 aa15.3■□□□□ 0.04
SNRPA1-210ENST00000560383 RNF157Q96PX1 679 aa15.3■□□□□ 0.04
SNRPA1-210ENST00000560383 PCDHA13Q9Y5I0 950 aa15.3■□□□□ 0.04
SNRPA1-210ENST00000560383 A0A0A6YYK5 440 aaPredicted RBP15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 CFAP69A5D8W1 941 aa15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 POM121BA6NF01 834 aa15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 A6NNZ2 444 aa15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 RIOK3O14730 519 aaKnown RBP15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 HTRA2O43464 458 aaPredicted RBP15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 ITIH2P19823 946 aa15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 ACP1P24666 158 aa15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 CYLC1P35663 651 aaPredicted RBP15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 SCNN1BP51168 640 aa15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 CLDN2P57739 230 aa15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 BCL2L1Q07817 233 aa15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 DNAJC3Q13217 504 aa15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 SGCGQ13326 291 aa15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 ZNF235Q14590 738 aa15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 AGERQ15109 404 aa15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 PROX2Q3B8N5 592 aa15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 CCDC157Q569K6 752 aa15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 LRRC73Q5JTD7 316 aa15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 MARC1Q5VT66 337 aa15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 DCP2Q8IU60 420 aaKnown RBP15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 TMTC1Q8IUR5 882 aa15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 SLC22A18ASQ8N1D0 253 aa15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 CACTIN-AS1Q8N1I8 211 aa15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 OR13H1Q8NG92 308 aa15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 NSMCE1Q8WV22 266 aa15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 MAML1Q92585 1016 aa15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 NXPE2Q96DL1 559 aa15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 NUDCD1Q96RS6 583 aa15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 MYOCQ99972 504 aa15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 PCDH12Q9NPG4 1184 aa15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 EPN1Q9Y6I3 576 aaPredicted RBP15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 KNTC1P50748 2209 aa15.29■□□□□ 0.04
SNRPA1-210ENST00000560383 SMG1Q96Q15 3661 aaKnown RBP15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 MYLKQ15746 1914 aa15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 A0A1W2PQ67 120 aa15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 LRRD1A4D1F6 860 aa15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 FAM149AA5PLN7 773 aa15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 MMP20O60882 483 aa15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 SOCS5O75159 536 aa15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 TM7SF2O76062 418 aa15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 MX2P20592 715 aa15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 XPAP23025 273 aaPredicted RBP15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 CCNCP24863 283 aa15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 MMP12P39900 470 aa15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 MMP13P45452 471 aa15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 RABIFP47224 123 aa15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 PFN3P60673 137 aa15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 POLR2LP62875 67 aaKnown RBP15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 GBE1Q04446 702 aa15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 ZNF211Q13398 564 aaPredicted RBP15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 SPA17Q15506 151 aa15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 IFI16Q16666 785 aaKnown RBP15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 SLC9A4Q6AI14 798 aa15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 ALG1LQ6GMV1 187 aa15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 Q6ZSR6 202 aa15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 RHOT1Q8IXI2 618 aa15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 BBS5Q8N3I7 341 aa15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 OR4C6Q8NH72 309 aa15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 CXorf40AQ8TE69 158 aa15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 LUC7LQ9NQ29 371 aaKnown RBP15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 DTLQ9NZJ0 730 aa15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 AMACRQ9UHK6 382 aa15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 ATP8A1Q9Y2Q0 1164 aa15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 RAXQ9Y2V3 346 aa15.28■□□□□ 0.04
SNRPA1-210ENST00000560383 A0A087WV48 116 aa15.27■□□□□ 0.04
SNRPA1-210ENST00000560383 FPGTO14772 594 aa15.27■□□□□ 0.04
SNRPA1-210ENST00000560383 MATN3O15232 486 aa15.27■□□□□ 0.04
SNRPA1-210ENST00000560383 NDUFA10O95299 355 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms