RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 TRAF2Q12933 501 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 RALGDSQ12967 914 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 DNAJC3Q13217 504 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 TCEAL1Q15170 157 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 IRF4Q15306 451 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 WSCD2Q2TBF2 565 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 MARC1Q5VT66 337 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 NYAP1Q6ZVC0 841 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 ZSCAN30Q86W11 494 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 MARCH9Q86YJ5 346 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 MAP7D3Q8IWC1 876 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 OXR1Q8N573 874 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 TEX26Q8N6G2 289 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 DENND6BQ8NEG7 585 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 ADAMTS14Q8WXS8 1223 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 RNF157Q96PX1 679 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 NUDCD1Q96RS6 583 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 MGME1Q9BQP7 344 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 TMEM121BQ9BXQ6 578 aaPredicted RBP11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 NT5MQ9NPB1 228 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 SCUBE2Q9NQ36 999 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 DNAJC28Q9NX36 388 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 LCMT1Q9UIC8 334 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 INTUQ9ULD6 942 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 PNMA8BQ9ULN7 279 aaPredicted RBP11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 APOBEC2Q9Y235 224 aaKnown RBP11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 PCDHA13Q9Y5I0 950 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 DMXL2Q8TDJ6 3036 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 SPTY2D1-AS1A0A0U1RR47 76 aa11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 RCCD1A6NED2 376 aa11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 SOWAHDA6NJG2 315 aa11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 C1QTNF9BB2RNN3 333 aa11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 FFAR2O15552 330 aa11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 HTRA2O43464 458 aaPredicted RBP11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 PIAS2O75928 621 aa11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 DKK1O94907 266 aa11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 LDOC1O95751 146 aaPredicted RBP11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 KRT1P04264 644 aa11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 C1QTNF9P0C862 333 aa11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 GIMD1P0DJR0 217 aa11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 GM2AP17900 193 aa11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 COMTP21964 271 aa11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 HSPA9P38646 679 aaKnown RBP11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 RABIFP47224 123 aa11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 EIF2B5Q13144 721 aaKnown RBP11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 PDE1CQ14123 709 aaPredicted RBP11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 INAVAQ3KP66 663 aa11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 ERAP2Q6P179 960 aa11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 NPNTQ6UXI9 565 aa11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 PAF1Q8N7H5 531 aa11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 PLD5Q8N7P1 536 aa11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 PDCD6IPQ8WUM4 868 aaKnown RBP11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 MAML1Q92585 1016 aa11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 RNF25Q96BH1 459 aaPredicted RBP11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 CNDP2Q96KP4 475 aaKnown RBP11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 TSGA13Q96PP4 275 aa11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 SMIM14Q96QK8 99 aa11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 PANX2Q96RD6 677 aa11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 SEMA3CQ99985 751 aa11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 TCEAL2Q9H3H9 227 aaPredicted RBP11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 DTLQ9NZJ0 730 aa11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 SALL4Q9UJQ4 1053 aa11.72□□□□□ -0.53
RABGGTA-216ENST00000560243 ANKRD11Q6UB99 2663 aaPredicted RBP11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 A0A0U1RQS6 177 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 ENC1O14682 589 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 MATN3O15232 486 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 SIGLEC6O43699 453 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 LZTS3O60299 673 aaPredicted RBP11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 NEBLO76041 1014 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 TRIM16O95361 564 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 MYF5P13349 255 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 FECHP22830 423 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 NOP2P46087 812 aaKnown RBP11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 MARCKSL1P49006 195 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 CLDN6P56747 220 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 DSC2Q02487 901 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 LRRC14Q15048 493 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 LLGL1Q15334 1064 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 IFI16Q16666 785 aaKnown RBP11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 LRRC38Q5VT99 294 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 RAD9BQ6WBX8 426 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 LIPIQ6XZB0 460 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 B4GALNT4Q76KP1 1039 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 DPPA4Q7L190 304 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 DCP2Q8IU60 420 aaKnown RBP11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 LRRC49Q8IUZ0 686 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 RBFAQ8N0V3 343 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 PELI3Q8N2H9 469 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 PLA2G15Q8NCC3 412 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 FAM174AQ8TBP5 190 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 NSMCE1Q8WV22 266 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 GATA6Q92908 595 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 LGMNQ99538 433 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 B4GALT6Q9UBX8 382 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 REXO2Q9Y3B8 237 aaKnown RBP11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 NEUROG3Q9Y4Z2 214 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 HEY1Q9Y5J3 304 aa11.71□□□□□ -0.53
RABGGTA-216ENST00000560243 EPN1Q9Y6I3 576 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms