RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 CILP2Q8IUL8 1156 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 CEP97Q8IW35 865 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 MFSD6LQ8IWD5 586 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 LSMEM2Q8N112 164 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 TTC9BQ8N6N2 239 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 GPATCH11Q8N954 259 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 KDM1BQ8NB78 822 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 SLAIN1Q8ND83 568 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 OR13J1Q8NGT2 312 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 FBXO27Q8NI29 283 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 RAET1EQ8TD07 263 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 KCNV2Q8TDN2 545 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 HEXDCQ8WVB3 486 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 PSMG2Q969U7 264 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 PLD4Q96BZ4 506 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 PABPC5Q96DU9 382 aaKnown RBP8.14□□□□□ -1.11
SMAD3-212ENST00000559937 MAELQ96JY0 434 aaKnown RBP8.14□□□□□ -1.11
SMAD3-212ENST00000559937 UBXN10Q96LJ8 280 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 RPRD1AQ96P16 312 aaPredicted RBP8.14□□□□□ -1.11
SMAD3-212ENST00000559937 PANX3Q96QZ0 392 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 SERPINI1Q99574 410 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 OMDQ99983 421 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 GPR62Q9BZJ7 368 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 PDFQ9HBH1 243 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 EML4Q9HC35 981 aaKnown RBP8.14□□□□□ -1.11
SMAD3-212ENST00000559937 HMX1Q9NP08 348 aaPredicted RBP8.14□□□□□ -1.11
SMAD3-212ENST00000559937 IGSF5Q9NSI5 407 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 NMRK1Q9NWW6 199 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 HACD3Q9P035 362 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 UXTQ9UBK9 157 aaPredicted RBP8.14□□□□□ -1.11
SMAD3-212ENST00000559937 BCAP29Q9UHQ4 241 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 LRCH1Q9Y2L9 728 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.14□□□□□ -1.11
SMAD3-212ENST00000559937 COL4A6Q14031 1691 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 TNRC18O15417 2968 aaPredicted RBP8.13□□□□□ -1.11
SMAD3-212ENST00000559937 LTBP2Q14767 1821 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.13□□□□□ -1.11
SMAD3-212ENST00000559937 MAP3K7O43318 606 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 DCXO43602 365 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 LDB2O43679 373 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 TLR5O60602 858 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 NBNO60934 754 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 RPP40O75818 363 aaKnown RBP8.13□□□□□ -1.11
SMAD3-212ENST00000559937 NDST3O95803 873 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 EFEMP2O95967 443 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 S1PR4O95977 384 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 INHAP05111 366 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 CHRNGP07510 517 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 SERPINF2P08697 491 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 ANPEPP15144 967 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 SAT1P21673 171 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 PIK3R1P27986 724 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 HOXD9P28356 352 aaPredicted RBP8.13□□□□□ -1.11
SMAD3-212ENST00000559937 OR1E1P30953 314 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 ATP5C1P36542 298 aaKnown RBP8.13□□□□□ -1.11
SMAD3-212ENST00000559937 ETFBP38117 255 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 GLRBP48167 497 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 SLC11A2P49281 568 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 TUFMP49411 452 aaKnown RBP8.13□□□□□ -1.11
SMAD3-212ENST00000559937 SUOXP51687 545 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 MTTPP55157 894 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 CDH4P55283 916 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 IRX1P78414 480 aaPredicted RBP8.13□□□□□ -1.11
SMAD3-212ENST00000559937 MRPS35P82673 323 aaKnown RBP8.13□□□□□ -1.11
SMAD3-212ENST00000559937 XIAPP98170 497 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 SLC25A3Q00325 362 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 MLLT1Q03111 559 aaPredicted RBP8.13□□□□□ -1.11
SMAD3-212ENST00000559937 CUL3Q13618 768 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 LSM12Q3MHD2 195 aaKnown RBP8.13□□□□□ -1.11
SMAD3-212ENST00000559937 MGAT5BQ3V5L5 792 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 RBM20Q5T481 1227 aaKnown RBP8.13□□□□□ -1.11
SMAD3-212ENST00000559937 VWA5B1Q5TIE3 1220 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 HECTD2Q5U5R9 776 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 NADSYN1Q6IA69 706 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 MRNIPQ6NTE8 343 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 RNF19BQ6ZMZ0 732 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 CHST9Q7L1S5 443 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 MIB1Q86YT6 1006 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 MFN1Q8IWA4 741 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 FAM126BQ8IXS8 530 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 LGI2Q8N0V4 545 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 CRIPAKQ8N1N5 446 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 PHTF2Q8N3S3 785 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 PGBD5Q8N414 524 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 SLC25A41Q8N5S1 370 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 POU5F2Q8N7G0 328 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 TXNDC5Q8NBS9 432 aaKnown RBP8.13□□□□□ -1.11
SMAD3-212ENST00000559937 DBF4BQ8NFT6 615 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 CEP70Q8NHQ1 597 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 CD99L2Q8TCZ2 262 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 BRSK1Q8TDC3 778 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 L3HYPDHQ96EM0 354 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 IFT43Q96FT9 208 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 KLHL5Q96PQ7 755 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 ASB2Q96Q27 587 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 OR52B2Q96RD2 323 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 SEMA3CQ99985 751 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 MGME1Q9BQP7 344 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 TTPALQ9BTX7 342 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 VCX3BQ9H321 246 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms