RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 ALDH1A2O94788 518 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 HLA-EP13747 358 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 KIR2DL1P43626 348 aaPredicted RBP12.26□□□□□ -0.45
HERC1-205ENST00000559886 GRIA4P48058 902 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 ZNF844Q08AG5 666 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 STAT4Q14765 748 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 PON2Q15165 354 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 ANKRD20A4Q4UJ75 823 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 SPANXN3Q5MJ09 141 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 IER5LQ5T953 404 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 GDPD4Q6W3E5 623 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 BRSK1Q8TDC3 778 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 FBF1Q8TES7 1133 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 MSANTD3Q96H12 275 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 ZNF778Q96MU6 729 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 FCRL3Q96P31 734 aaPredicted RBP12.26□□□□□ -0.45
HERC1-205ENST00000559886 ACOX2Q99424 681 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 TMEM109Q9BVC6 243 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 ACBD3Q9H3P7 528 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 ACSS3Q9H6R3 686 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 MOCS1Q9NZB8 636 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 IL36AQ9UHA7 158 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 A0A1W2PQ67 120 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 MROH6A6NGR9 719 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 C1QAP02745 245 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 UGT2B4P06133 528 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 CHRM1P11229 460 aaPredicted RBP12.26□□□□□ -0.45
HERC1-205ENST00000559886 DRD1P21728 446 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 PRKCHP24723 683 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 NMBRP28336 390 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 SLC8A1P32418 973 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 STX2P32856 288 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 EPHB1P54762 984 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 FAM193AP78312 1265 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 IFFO1Q0D2I5 559 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 FRG1Q14331 258 aaKnown RBP12.26□□□□□ -0.45
HERC1-205ENST00000559886 FSTL4Q6MZW2 842 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 CES3Q6UWW8 571 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 ZSWIM9Q86XI8 627 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 ZNF513Q8N8E2 541 aaPredicted RBP12.26□□□□□ -0.45
HERC1-205ENST00000559886 BLOC1S5Q8TDH9 187 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 MFSD3Q96ES6 412 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 RUFY1Q96T51 708 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 OSBPL1AQ9BXW6 950 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 SUN2Q9UH99 717 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 SPO11Q9Y5K1 396 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 FAM169AQ9Y6X4 670 aa12.26□□□□□ -0.45
HERC1-205ENST00000559886 ZCWPW2A0A1B0GU75 182 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 SHISA7A6NL88 538 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 LDB2O43679 373 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 SIN3BO75182 1162 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 LEFTY1O75610 366 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 TCEA3O75764 348 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 PRKCGP05129 697 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 CTSLP07711 333 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 PIRTP0C851 137 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 BMP1P13497 986 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 ZP2Q05996 745 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 GRSF1Q12849 480 aaKnown RBP eCLIP12.25□□□□□ -0.45
HERC1-205ENST00000559886 LAMB3Q13751 1172 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 SEPT6Q14141 434 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 SLC44A4Q53GD3 710 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 ARSIQ5FYB1 569 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 NLRP9Q7RTR0 991 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 GRIN3AQ8TCU5 1115 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 KCNV2Q8TDN2 545 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 ZNF669Q96BR6 464 aaPredicted RBP12.25□□□□□ -0.45
HERC1-205ENST00000559886 CCDC77Q9BR77 488 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 ZDHHC4Q9NPG8 344 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 TREX1Q9NSU2 369 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 CACNA2D2Q9NY47 1150 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 PHTF1Q9UMS5 762 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 DUSP12Q9UNI6 340 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 PPIL1Q9Y3C6 166 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 STON1Q9Y6Q2 735 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 A0A0J9YYE9 177 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 PAPSS2O95340 614 aaPredicted RBP12.25□□□□□ -0.45
HERC1-205ENST00000559886 EGFP01133 1207 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 TRBC1P01850 177 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 ELAVL3Q14576 367 aaKnown RBP12.25□□□□□ -0.45
HERC1-205ENST00000559886 CEP85LQ5SZL2 805 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 TSTD2Q5T7W7 516 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 TRMT10BQ6PF06 316 aaKnown RBP12.25□□□□□ -0.45
HERC1-205ENST00000559886 CHPFQ8IZ52 775 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 STK40Q8N2I9 435 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.25□□□□□ -0.45
HERC1-205ENST00000559886 ZBTB9Q96C00 473 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 KLHL32Q96NJ5 620 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 SMIM14Q96QK8 99 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 CYTH2Q99418 400 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 ROPN1BQ9BZX4 212 aaPredicted RBP12.25□□□□□ -0.45
HERC1-205ENST00000559886 ROPN1Q9HAT0 212 aaPredicted RBP12.25□□□□□ -0.45
HERC1-205ENST00000559886 MAGEE1Q9HCI5 957 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.25□□□□□ -0.45
HERC1-205ENST00000559886 HACD3Q9P035 362 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 FETUBQ9UGM5 382 aa12.25□□□□□ -0.45
HERC1-205ENST00000559886 EXOC1LA0A1B0GW35 172 aa12.24□□□□□ -0.45
HERC1-205ENST00000559886 TSPAN11A1L157 253 aa12.24□□□□□ -0.45
HERC1-205ENST00000559886 EPHX1P07099 455 aa12.24□□□□□ -0.45
HERC1-205ENST00000559886 TAF1AQ15573 450 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms