RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 RMDN1Q96DB5 314 aa12.76□□□□□ -0.37
USP3-213ENST00000559711 ATXN7L3BQ96GX2 97 aa12.76□□□□□ -0.37
USP3-213ENST00000559711 NKX2-4Q9H2Z4 354 aa12.76□□□□□ -0.37
USP3-213ENST00000559711 MANSC1Q9H8J5 431 aa12.76□□□□□ -0.37
USP3-213ENST00000559711 PIDD1Q9HB75 910 aa12.76□□□□□ -0.37
USP3-213ENST00000559711 MSRAQ9UJ68 235 aa12.76□□□□□ -0.37
USP3-213ENST00000559711 EMCNQ9ULC0 261 aa12.76□□□□□ -0.37
USP3-213ENST00000559711 SPO11Q9Y5K1 396 aa12.76□□□□□ -0.37
USP3-213ENST00000559711 WDR91A4D1P6 747 aa12.75□□□□□ -0.37
USP3-213ENST00000559711 SLC9A3R1O14745 358 aaPredicted RBP12.75□□□□□ -0.37
USP3-213ENST00000559711 KLF11O14901 512 aa12.75□□□□□ -0.37
USP3-213ENST00000559711 BIRC5O15392 142 aa12.75□□□□□ -0.37
USP3-213ENST00000559711 PLIN3O60664 434 aa12.75□□□□□ -0.37
USP3-213ENST00000559711 EDF1O60869 148 aaKnown RBP12.75□□□□□ -0.37
USP3-213ENST00000559711 RPP40O75818 363 aaKnown RBP12.75□□□□□ -0.37
USP3-213ENST00000559711 TOP3BO95985 862 aaKnown RBP12.75□□□□□ -0.37
USP3-213ENST00000559711 GSRP00390 522 aa12.75□□□□□ -0.37
USP3-213ENST00000559711 PRKCGP05129 697 aa12.75□□□□□ -0.37
USP3-213ENST00000559711 C2P06681 752 aa12.75□□□□□ -0.37
USP3-213ENST00000559711 PIRTP0C851 137 aa12.75□□□□□ -0.37
USP3-213ENST00000559711 ABCG1P45844 678 aa12.75□□□□□ -0.37
USP3-213ENST00000559711 MAPK8P45983 427 aa12.75□□□□□ -0.37
USP3-213ENST00000559711 ILF2Q12905 390 aaKnown RBP12.75□□□□□ -0.37
USP3-213ENST00000559711 ITIH4Q14624 930 aa12.75□□□□□ -0.37
USP3-213ENST00000559711 TAF1AQ15573 450 aaPredicted RBP12.75□□□□□ -0.37
USP3-213ENST00000559711 RAB30Q15771 203 aa12.75□□□□□ -0.37
USP3-213ENST00000559711 DBN1Q16643 649 aa12.75□□□□□ -0.37
USP3-213ENST00000559711 LY6G5CQ5SRR4 150 aa12.75□□□□□ -0.37
USP3-213ENST00000559711 ATXN7L2Q5T6C5 722 aaPredicted RBP12.75□□□□□ -0.37
USP3-213ENST00000559711 ASTLQ6HA08 431 aaPredicted RBP12.75□□□□□ -0.37
USP3-213ENST00000559711 CGB2Q6NT52 195 aa12.75□□□□□ -0.37
USP3-213ENST00000559711 CILP2Q8IUL8 1156 aa12.75□□□□□ -0.37
USP3-213ENST00000559711 CELF5Q8N6W0 485 aaKnown RBP12.75□□□□□ -0.37
USP3-213ENST00000559711 VN1R2Q8NFZ6 395 aa12.75□□□□□ -0.37
USP3-213ENST00000559711 GPR150Q8NGU9 434 aa12.75□□□□□ -0.37
USP3-213ENST00000559711 ING5Q8WYH8 240 aa12.75□□□□□ -0.37
USP3-213ENST00000559711 ISG20Q96AZ6 181 aaKnown RBP12.75□□□□□ -0.37
USP3-213ENST00000559711 TBATAQ96M53 351 aa12.75□□□□□ -0.37
USP3-213ENST00000559711 CDCA3Q99618 268 aaPredicted RBP12.75□□□□□ -0.37
USP3-213ENST00000559711 BBS2Q9BXC9 721 aa12.75□□□□□ -0.37
USP3-213ENST00000559711 SFXN1Q9H9B4 322 aa12.75□□□□□ -0.37
USP3-213ENST00000559711 NLE1Q9NVX2 485 aaPredicted RBP12.75□□□□□ -0.37
USP3-213ENST00000559711 SIRPGQ9P1W8 387 aa12.75□□□□□ -0.37
USP3-213ENST00000559711 SLC39A10Q9ULF5 831 aa12.75□□□□□ -0.37
USP3-213ENST00000559711 HS3ST2Q9Y278 367 aa12.75□□□□□ -0.37
USP3-213ENST00000559711 STARD13Q9Y3M8 1113 aa12.75□□□□□ -0.37
USP3-213ENST00000559711 RANBP2P49792 3224 aaKnown RBP12.74□□□□□ -0.37
USP3-213ENST00000559711 A0A096LPK6 155 aa12.74□□□□□ -0.37
USP3-213ENST00000559711 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.74□□□□□ -0.37
USP3-213ENST00000559711 NEDD8-MDP1E9PL57 170 aa12.74□□□□□ -0.37
USP3-213ENST00000559711 HAUS5O94927 633 aa12.74□□□□□ -0.37
USP3-213ENST00000559711 IL1BP01584 269 aa12.74□□□□□ -0.37
USP3-213ENST00000559711 BPGMP07738 259 aa12.74□□□□□ -0.37
USP3-213ENST00000559711 TYRP14679 529 aa12.74□□□□□ -0.37
USP3-213ENST00000559711 ZNF140P52738 457 aaPredicted RBP12.74□□□□□ -0.37
USP3-213ENST00000559711 RPL26P61254 145 aaKnown RBP12.74□□□□□ -0.37
USP3-213ENST00000559711 PRAMEP78395 509 aa12.74□□□□□ -0.37
USP3-213ENST00000559711 DMC1Q14565 340 aa12.74□□□□□ -0.37
USP3-213ENST00000559711 ZKSCAN8Q15776 578 aaPredicted RBP12.74□□□□□ -0.37
USP3-213ENST00000559711 FUT11Q495W5 492 aa12.74□□□□□ -0.37
USP3-213ENST00000559711 N4BP2L1Q5TBK1 243 aaPredicted RBP12.74□□□□□ -0.37
USP3-213ENST00000559711 PPP2R2DQ66LE6 453 aa12.74□□□□□ -0.37
USP3-213ENST00000559711 TMC5Q6UXY8 1006 aa12.74□□□□□ -0.37
USP3-213ENST00000559711 FAM47EQ6ZV65 393 aa12.74□□□□□ -0.37
USP3-213ENST00000559711 MICALCLQ6ZW33 695 aa12.74□□□□□ -0.37
USP3-213ENST00000559711 KIAA0907Q7Z7F0 614 aaPredicted RBP12.74□□□□□ -0.37
USP3-213ENST00000559711 LCA5Q86VQ0 697 aa12.74□□□□□ -0.37
USP3-213ENST00000559711 TRIM42Q8IWZ5 723 aa12.74□□□□□ -0.37
USP3-213ENST00000559711 LPCAT1Q8NF37 534 aa12.74□□□□□ -0.37
USP3-213ENST00000559711 MDGA1Q8NFP4 955 aa12.74□□□□□ -0.37
USP3-213ENST00000559711 OR13C4Q8NGS5 318 aa12.74□□□□□ -0.37
USP3-213ENST00000559711 OR6P1Q8NGX9 317 aa12.74□□□□□ -0.37
USP3-213ENST00000559711 DNAJC1Q96KC8 554 aaKnown RBP12.74□□□□□ -0.37
USP3-213ENST00000559711 LRRC3BQ96PB8 259 aa12.74□□□□□ -0.37
USP3-213ENST00000559711 GDF15Q99988 308 aa12.74□□□□□ -0.37
USP3-213ENST00000559711 SLC2A11Q9BYW1 496 aa12.74□□□□□ -0.37
USP3-213ENST00000559711 CAB39LQ9H9S4 337 aa12.74□□□□□ -0.37
USP3-213ENST00000559711 SLCO1B3Q9NPD5 702 aa12.74□□□□□ -0.37
USP3-213ENST00000559711 PHTF1Q9UMS5 762 aa12.74□□□□□ -0.37
USP3-213ENST00000559711 RPL26L1Q9UNX3 145 aaKnown RBP12.74□□□□□ -0.37
USP3-213ENST00000559711 USP15Q9Y4E8 981 aaPredicted RBP12.74□□□□□ -0.37
USP3-213ENST00000559711 NOTCH4Q99466 2003 aa12.74□□□□□ -0.37
USP3-213ENST00000559711 C2orf81A6NN90 581 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 TRAFD1O14545 582 aaPredicted RBP12.73□□□□□ -0.37
USP3-213ENST00000559711 AURKAO14965 403 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 HTRA2O43464 458 aaPredicted RBP12.73□□□□□ -0.37
USP3-213ENST00000559711 PGLSO95336 258 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 S1PR4O95977 384 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 PROCP04070 461 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 PABPC1P11940 636 aaKnown RBP12.73□□□□□ -0.37
USP3-213ENST00000559711 SRCP12931 536 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 SULT2A1Q06520 285 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 USP10Q14694 798 aaKnown RBP12.73□□□□□ -0.37
USP3-213ENST00000559711 DLG2Q15700 870 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 CCDC153Q494R4 210 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 DGKKQ5KSL6 1271 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 C16orf46Q6P387 395 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 GLT6D1Q7Z4J2 308 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 SPATA21Q7Z572 469 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 PTAR1Q7Z6K3 402 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms