RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 RGRP47804 291 aa15.05■□□□□ -0
LRRC28-213ENST00000559399 CSNK1DP48730 415 aa15.05■□□□□ -0
LRRC28-213ENST00000559399 HK3P52790 923 aa15.05■□□□□ -0
LRRC28-213ENST00000559399 AGERQ15109 404 aa15.05■□□□□ -0
LRRC28-213ENST00000559399 ALG11Q2TAA5 492 aa15.05■□□□□ -0
LRRC28-213ENST00000559399 FILIP1LQ4L180 1135 aa15.05■□□□□ -0
LRRC28-213ENST00000559399 PPP6R3Q5H9R7 873 aaPredicted RBP15.05■□□□□ -0
LRRC28-213ENST00000559399 C3orf38Q5JPI3 329 aa15.05■□□□□ -0
LRRC28-213ENST00000559399 PERM1Q5SV97 790 aa15.05■□□□□ -0
LRRC28-213ENST00000559399 AFMIDQ63HM1 303 aa15.05■□□□□ -0
LRRC28-213ENST00000559399 GPR155Q7Z3F1 870 aa15.05■□□□□ -0
LRRC28-213ENST00000559399 ZSWIM9Q86XI8 627 aa15.05■□□□□ -0
LRRC28-213ENST00000559399 CAMK1DQ8IU85 385 aa15.05■□□□□ -0
LRRC28-213ENST00000559399 HID1Q8IV36 788 aa15.05■□□□□ -0
LRRC28-213ENST00000559399 PSTKQ8IV42 348 aaKnown RBP15.05■□□□□ -0
LRRC28-213ENST00000559399 ARFGAP1Q8N6T3 406 aa15.05■□□□□ -0
LRRC28-213ENST00000559399 NPWQ8N729 165 aa15.05■□□□□ -0
LRRC28-213ENST00000559399 ARL10Q8N8L6 244 aa15.05■□□□□ -0
LRRC28-213ENST00000559399 TSEN2Q8NCE0 465 aaKnown RBP15.05■□□□□ -0
LRRC28-213ENST00000559399 ATL2Q8NHH9 583 aa15.05■□□□□ -0
LRRC28-213ENST00000559399 WDR48Q8TAF3 677 aa15.05■□□□□ -0
LRRC28-213ENST00000559399 SCG3Q8WXD2 468 aaKnown RBP15.05■□□□□ -0
LRRC28-213ENST00000559399 ATXN7L3BQ96GX2 97 aa15.05■□□□□ -0
LRRC28-213ENST00000559399 CINPQ9BW66 212 aaPredicted RBP15.05■□□□□ -0
LRRC28-213ENST00000559399 HAUS4Q9H6D7 363 aa15.05■□□□□ -0
LRRC28-213ENST00000559399 SATB2Q9UPW6 733 aa15.05■□□□□ -0
LRRC28-213ENST00000559399 OR1A2Q9Y585 309 aa15.05■□□□□ -0
LRRC28-213ENST00000559399 GOLGA4Q13439 2230 aaKnown RBP15.05■□□□□ -0
LRRC28-213ENST00000559399 URB1O60287 2271 aaKnown RBP15.05■□□□□ -0
LRRC28-213ENST00000559399 SMTNL1A8MU46 457 aa15.04■□□□□ -0
LRRC28-213ENST00000559399 FTLP02792 175 aaPredicted RBP15.04■□□□□ -0
LRRC28-213ENST00000559399 PRKCGP05129 697 aa15.04■□□□□ -0
LRRC28-213ENST00000559399 PCCBP05166 539 aa15.04■□□□□ -0
LRRC28-213ENST00000559399 CELA2BP08218 269 aaPredicted RBP15.04■□□□□ -0
LRRC28-213ENST00000559399 CTSEP14091 401 aa15.04■□□□□ -0
LRRC28-213ENST00000559399 MIPP30301 263 aa15.04■□□□□ -0
LRRC28-213ENST00000559399 ZNF135P52742 658 aaPredicted RBP15.04■□□□□ -0
LRRC28-213ENST00000559399 BCL2L1Q07817 233 aa15.04■□□□□ -0
LRRC28-213ENST00000559399 INPP5AQ14642 412 aa15.04■□□□□ -0
LRRC28-213ENST00000559399 RFTN1Q14699 578 aaPredicted RBP15.04■□□□□ -0
LRRC28-213ENST00000559399 LVRNQ6Q4G3 990 aa15.04■□□□□ -0
LRRC28-213ENST00000559399 IGF2-ASQ6U949 168 aa15.04■□□□□ -0
LRRC28-213ENST00000559399 ENPP7Q6UWV6 458 aa15.04■□□□□ -0
LRRC28-213ENST00000559399 ZNF571Q7Z3V5 609 aaPredicted RBP15.04■□□□□ -0
LRRC28-213ENST00000559399 SRLQ86TD4 932 aa15.04■□□□□ -0
LRRC28-213ENST00000559399 ARHGAP12Q8IWW6 846 aa15.04■□□□□ -0
LRRC28-213ENST00000559399 PAF1Q8N7H5 531 aa15.04■□□□□ -0
LRRC28-213ENST00000559399 PCDH19Q8TAB3 1148 aa15.04■□□□□ -0
LRRC28-213ENST00000559399 TSACCQ96A04 125 aaPredicted RBP15.04■□□□□ -0
LRRC28-213ENST00000559399 ZNF653Q96CK0 615 aa15.04■□□□□ -0
LRRC28-213ENST00000559399 ECHDC3Q96DC8 303 aa15.04■□□□□ -0
LRRC28-213ENST00000559399 NAF1Q96HR8 494 aaKnown RBP15.04■□□□□ -0
LRRC28-213ENST00000559399 CCDC3Q9BQI4 270 aa15.04■□□□□ -0
LRRC28-213ENST00000559399 EDEM3Q9BZQ6 932 aa15.04■□□□□ -0
LRRC28-213ENST00000559399 TRIM7Q9C029 511 aa15.04■□□□□ -0
LRRC28-213ENST00000559399 ASCL3Q9NQ33 180 aa15.04■□□□□ -0
LRRC28-213ENST00000559399 AIPL1Q9NZN9 384 aa15.04■□□□□ -0
LRRC28-213ENST00000559399 KLQ9UEF7 1012 aa15.04■□□□□ -0
LRRC28-213ENST00000559399 CNOT8Q9UFF9 292 aaKnown RBP15.04■□□□□ -0
LRRC28-213ENST00000559399 PADI4Q9UM07 663 aa15.04■□□□□ -0
LRRC28-213ENST00000559399 SCINQ9Y6U3 715 aa15.04■□□□□ -0
LRRC28-213ENST00000559399 IGSF10Q6WRI0 2623 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 TEX51A0A1B0GUA7 166 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 A0A1W2PQC6 194 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 CFAP69A5D8W1 941 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 TK2O00142 265 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 LRCH4O75427 683 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 GZMAP12544 262 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 RBMS1P29558 406 aaKnown RBP15.03■□□□□ -0
LRRC28-213ENST00000559399 PRKCIP41743 596 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 UCNP55089 124 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 SRP54P61011 504 aaKnown RBP15.03■□□□□ -0
LRRC28-213ENST00000559399 CXADRP78310 365 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 IL10RBQ08334 325 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 KLHL30Q0D2K2 578 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 RALGDSQ12967 914 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 MTM1Q13496 603 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 TCEA2Q15560 299 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 BROXQ5VW32 411 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 E4F1Q66K89 784 aaPredicted RBP15.03■□□□□ -0
LRRC28-213ENST00000559399 CYP4V2Q6ZWL3 525 aaPredicted RBP15.03■□□□□ -0
LRRC28-213ENST00000559399 RD3Q7Z3Z2 195 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 SDR16C5Q8N3Y7 309 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 KYQ8NBH2 561 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 KCNE4Q8WWG9 221 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 TRIM11Q96F44 468 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 WDR92Q96MX6 357 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 APOOQ9BUR5 198 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 SYNDIG1Q9H7V2 258 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 ZWILCHQ9H900 591 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 TMEM63CQ9P1W3 806 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 GULP1Q9UBP9 304 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 PCDHGA8Q9Y5G5 932 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 ENTPD2Q9Y5L3 495 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 DOCK4Q8N1I0 1966 aa15.03■□□□□ -0
LRRC28-213ENST00000559399 DDX3XO00571 662 aaKnown RBP eCLIP15.02■□□□□ -0
LRRC28-213ENST00000559399 ATXN7O15265 892 aaPredicted RBP15.02■□□□□ -0
LRRC28-213ENST00000559399 RECQL5O94762 991 aaPredicted RBP15.02■□□□□ -0
LRRC28-213ENST00000559399 ELFN1P0C7U0 828 aa15.02■□□□□ -0
LRRC28-213ENST00000559399 MYBL1P10243 752 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms