RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 MSI2Q96DH6 328 aaKnown RBP11.45□□□□□ -0.58
CASC4-208ENST00000559151 ZNF333Q96JL9 665 aa11.45□□□□□ -0.58
CASC4-208ENST00000559151 MAP6D1Q9H9H5 199 aa11.45□□□□□ -0.58
CASC4-208ENST00000559151 MAGEE1Q9HCI5 957 aa11.45□□□□□ -0.58
CASC4-208ENST00000559151 MTMR6Q9Y217 621 aa11.45□□□□□ -0.58
CASC4-208ENST00000559151 UTYO14607 1347 aa11.44□□□□□ -0.58
CASC4-208ENST00000559151 PLOD3O60568 738 aa11.44□□□□□ -0.58
CASC4-208ENST00000559151 TLR2O60603 784 aa11.44□□□□□ -0.58
CASC4-208ENST00000559151 RBMXL2O75526 392 aaKnown RBP11.44□□□□□ -0.58
CASC4-208ENST00000559151 MMP3P08254 477 aa11.44□□□□□ -0.58
CASC4-208ENST00000559151 PRR35P0CG20 571 aa11.44□□□□□ -0.58
CASC4-208ENST00000559151 TFPIP10646 304 aa11.44□□□□□ -0.58
CASC4-208ENST00000559151 ETFAP13804 333 aa11.44□□□□□ -0.58
CASC4-208ENST00000559151 PSMC6P62333 389 aa11.44□□□□□ -0.58
CASC4-208ENST00000559151 IFI35P80217 286 aaPredicted RBP11.44□□□□□ -0.58
CASC4-208ENST00000559151 RAB41Q5JT25 222 aa11.44□□□□□ -0.58
CASC4-208ENST00000559151 QSOX2Q6ZRP7 698 aa11.44□□□□□ -0.58
CASC4-208ENST00000559151 PARP16Q8N5Y8 322 aa11.44□□□□□ -0.58
CASC4-208ENST00000559151 C1orf131Q8NDD1 294 aaKnown RBP11.44□□□□□ -0.58
CASC4-208ENST00000559151 SLF1Q9BQI6 1058 aa11.44□□□□□ -0.58
CASC4-208ENST00000559151 SEMA4CQ9C0C4 833 aa11.44□□□□□ -0.58
CASC4-208ENST00000559151 NPFFR1Q9GZQ6 430 aa11.44□□□□□ -0.58
CASC4-208ENST00000559151 SESN1Q9Y6P5 492 aa11.44□□□□□ -0.58
CASC4-208ENST00000559151 KCNU1A8MYU2 1149 aa11.43□□□□□ -0.58
CASC4-208ENST00000559151 E5RJQ4 531 aa11.43□□□□□ -0.58
CASC4-208ENST00000559151 STMND1H3BQB6 276 aa11.43□□□□□ -0.58
CASC4-208ENST00000559151 RB1P06400 928 aa11.43□□□□□ -0.58
CASC4-208ENST00000559151 GABRB1P18505 474 aa11.43□□□□□ -0.58
CASC4-208ENST00000559151 RRM1P23921 792 aa11.43□□□□□ -0.58
CASC4-208ENST00000559151 DCTDP32321 178 aa11.43□□□□□ -0.58
CASC4-208ENST00000559151 PPP3CCP48454 512 aa11.43□□□□□ -0.58
CASC4-208ENST00000559151 AIMP2Q13155 320 aaKnown RBP11.43□□□□□ -0.58
CASC4-208ENST00000559151 KIAA0930Q6ICG6 404 aaPredicted RBP11.43□□□□□ -0.58
CASC4-208ENST00000559151 ANKRD13BQ86YJ7 626 aa11.43□□□□□ -0.58
CASC4-208ENST00000559151 RANGRFQ9HD47 186 aaPredicted RBP11.43□□□□□ -0.58
CASC4-208ENST00000559151 ANKRD10Q9NXR5 420 aa11.43□□□□□ -0.58
CASC4-208ENST00000559151 FAM237AA0A1B0GTK4 181 aa11.42□□□□□ -0.58
CASC4-208ENST00000559151 CNOT3O75175 753 aaKnown RBP11.42□□□□□ -0.58
CASC4-208ENST00000559151 MYZAPP0CAP1 466 aa11.42□□□□□ -0.58
CASC4-208ENST00000559151 AGAP20933 346 aa11.42□□□□□ -0.58
CASC4-208ENST00000559151 LPIN1Q14693 890 aa11.42□□□□□ -0.58
CASC4-208ENST00000559151 ARHGEF6Q15052 776 aa11.42□□□□□ -0.58
CASC4-208ENST00000559151 SOWAHAQ2M3V2 549 aa11.42□□□□□ -0.58
CASC4-208ENST00000559151 ASTE1Q2TB18 679 aaPredicted RBP11.42□□□□□ -0.58
CASC4-208ENST00000559151 KRTAP15-1Q3LI76 137 aa11.42□□□□□ -0.58
CASC4-208ENST00000559151 SGO1Q5FBB7 561 aa11.42□□□□□ -0.58
CASC4-208ENST00000559151 NCAPH2Q6IBW4 605 aa11.42□□□□□ -0.58
CASC4-208ENST00000559151 HEPHL1Q6MZM0 1159 aa11.42□□□□□ -0.58
CASC4-208ENST00000559151 SLC2A7Q6PXP3 512 aa11.42□□□□□ -0.58
CASC4-208ENST00000559151 GLDNQ6ZMI3 551 aaPredicted RBP11.42□□□□□ -0.58
CASC4-208ENST00000559151 TICAM1Q8IUC6 712 aa11.42□□□□□ -0.58
CASC4-208ENST00000559151 SLC35F3Q8IY50 421 aa11.42□□□□□ -0.58
CASC4-208ENST00000559151 SNAPC3Q92966 411 aa11.42□□□□□ -0.58
CASC4-208ENST00000559151 FBXL8Q96CD0 374 aa11.42□□□□□ -0.58
CASC4-208ENST00000559151 ARHGEF26Q96DR7 871 aa11.42□□□□□ -0.58
CASC4-208ENST00000559151 C1QTNF5Q9BXJ0 243 aa11.42□□□□□ -0.58
CASC4-208ENST00000559151 DDX4Q9NQI0 724 aaKnown RBP11.42□□□□□ -0.58
CASC4-208ENST00000559151 SUCLA2Q9P2R7 463 aaPredicted RBP11.42□□□□□ -0.58
CASC4-208ENST00000559151 SYNDIG1LA6NDD5 238 aa11.41□□□□□ -0.58
CASC4-208ENST00000559151 ZNF814B7Z6K7 855 aa11.41□□□□□ -0.58
CASC4-208ENST00000559151 ENO3P13929 434 aaPredicted RBP11.41□□□□□ -0.58
CASC4-208ENST00000559151 AVPR1AP37288 418 aa11.41□□□□□ -0.58
CASC4-208ENST00000559151 EIF2DP41214 584 aaKnown RBP11.41□□□□□ -0.58
CASC4-208ENST00000559151 FAM27E3Q08E93 113 aa11.41□□□□□ -0.58
CASC4-208ENST00000559151 TMEM18Q96B42 140 aa11.41□□□□□ -0.58
CASC4-208ENST00000559151 PRSS22Q9GZN4 317 aa11.41□□□□□ -0.58
CASC4-208ENST00000559151 KLHL31Q9H511 634 aa11.41□□□□□ -0.58
CASC4-208ENST00000559151 PDZD7Q9H5P4 517 aa11.41□□□□□ -0.58
CASC4-208ENST00000559151 CHORDC1Q9UHD1 332 aaPredicted RBP11.41□□□□□ -0.58
CASC4-208ENST00000559151 COG5Q9UP83 839 aa11.41□□□□□ -0.58
CASC4-208ENST00000559151 ATG13O75143 517 aa11.4□□□□□ -0.58
CASC4-208ENST00000559151 NDUFS3O75489 264 aa11.4□□□□□ -0.58
CASC4-208ENST00000559151 ERAL1O75616 437 aaKnown RBP11.4□□□□□ -0.58
CASC4-208ENST00000559151 SLC25A12O75746 678 aa11.4□□□□□ -0.58
CASC4-208ENST00000559151 RGS11O94810 467 aa11.4□□□□□ -0.58
CASC4-208ENST00000559151 DNTTP04053 509 aa11.4□□□□□ -0.58
CASC4-208ENST00000559151 CLCN3P51790 818 aa11.4□□□□□ -0.58
CASC4-208ENST00000559151 CDH12P55289 794 aa11.4□□□□□ -0.58
CASC4-208ENST00000559151 INPP5JQ15735 1006 aaPredicted RBP11.4□□□□□ -0.58
CASC4-208ENST00000559151 CRELD2Q6UXH1 353 aaPredicted RBP11.4□□□□□ -0.58
CASC4-208ENST00000559151 CLEC17AQ6ZS10 378 aa11.4□□□□□ -0.58
CASC4-208ENST00000559151 CCDC13Q8IYE1 715 aa11.4□□□□□ -0.58
CASC4-208ENST00000559151 HUS1BQ8NHY5 278 aa11.4□□□□□ -0.58
CASC4-208ENST00000559151 JAKMIP2Q96AA8 810 aa11.4□□□□□ -0.58
CASC4-208ENST00000559151 PGAM5Q96HS1 289 aa11.4□□□□□ -0.58
CASC4-208ENST00000559151 PDE7BQ9NP56 450 aa11.4□□□□□ -0.58
CASC4-208ENST00000559151 FBXL17Q9UF56 701 aa11.4□□□□□ -0.58
CASC4-208ENST00000559151 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.4□□□□□ -0.58
CASC4-208ENST00000559151 NNMTP40261 264 aa11.39□□□□□ -0.59
CASC4-208ENST00000559151 GALCP54803 685 aa11.39□□□□□ -0.59
CASC4-208ENST00000559151 ITGADQ13349 1161 aa11.39□□□□□ -0.59
CASC4-208ENST00000559151 MTX1Q13505 466 aa11.39□□□□□ -0.59
CASC4-208ENST00000559151 SHBQ15464 509 aa11.39□□□□□ -0.59
CASC4-208ENST00000559151 Q4G0T1 1027 aa11.39□□□□□ -0.59
CASC4-208ENST00000559151 EPHA10Q5JZY3 1008 aa11.39□□□□□ -0.59
CASC4-208ENST00000559151 JADE1Q6IE81 842 aa11.39□□□□□ -0.59
CASC4-208ENST00000559151 HAPLN4Q86UW8 402 aa11.39□□□□□ -0.59
CASC4-208ENST00000559151 PRIMA1Q86XR5 153 aa11.39□□□□□ -0.59
CASC4-208ENST00000559151 CAMK1DQ8IU85 385 aa11.39□□□□□ -0.59
CASC4-208ENST00000559151 TEX11Q8IYF3 940 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms