RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 COQ6Q9Y2Z9 468 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 GON4LQ3T8J9 2241 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 FUOMA2VDF0 154 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 MAN1A2O60476 641 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 NOL3O60936 208 aaKnown RBP12.23□□□□□ -0.45
SEC11A-206ENST00000558924 TNFAIP8O95379 198 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 PCNAP12004 261 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 NSUN2Q08J23 767 aaKnown RBP eCLIP12.23□□□□□ -0.45
SEC11A-206ENST00000558924 TAF12Q16514 161 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 FAM110CQ1W6H9 321 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 GPR107Q5VW38 600 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 ABI1Q8IZP0 508 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 NXNL1Q96CM4 212 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 DHRS4Q9BTZ2 278 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 NFKBIZQ9BYH8 718 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 TIMMDC1Q9NPL8 285 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 NDFIP2Q9NV92 336 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 PADI3Q9ULW8 664 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 KANSL1LA0AUZ9 987 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 F2P00734 622 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 PTPRCAPQ14761 206 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 PPP1R3AQ16821 1122 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 FAM83EQ2M2I3 478 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 GDF6Q6KF10 455 aaPredicted RBP12.23□□□□□ -0.45
SEC11A-206ENST00000558924 CCDC80Q76M96 950 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 CRYBG2Q8N1P7 616 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 CFAP52Q8N1V2 620 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 ACTRT2Q8TDY3 377 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 FCRL2Q96LA5 508 aaPredicted RBP12.23□□□□□ -0.45
SEC11A-206ENST00000558924 HBEGFQ99075 208 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 SGIP1Q9BQI5 828 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 VRTNQ9H8Y1 702 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 SP110Q9HB58 689 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 ZDHHC7Q9NXF8 308 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 PSMD13Q9UNM6 376 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 OR51F1A6NGY5 319 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 RPL14P50914 215 aaKnown RBP12.22□□□□□ -0.45
SEC11A-206ENST00000558924 CRYBB1P53674 252 aaPredicted RBP12.22□□□□□ -0.45
SEC11A-206ENST00000558924 CTBSQ01459 385 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 SEMA5AQ13591 1074 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 CEACAM7Q14002 265 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 SMUG1Q53HV7 270 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 PAQR9Q6ZVX9 377 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 SNX29P2Q8IUI4 249 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 JADE3Q92613 823 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 DHRS1Q96LJ7 313 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 HNRNPABQ99729 332 aaKnown RBP12.22□□□□□ -0.45
SEC11A-206ENST00000558924 CCDC28BQ9BUN5 200 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 FBRSL1Q9HCM7 1045 aaKnown RBP12.22□□□□□ -0.45
SEC11A-206ENST00000558924 NMRK2Q9NPI5 230 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 CDC14AQ9UNH5 594 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 AP4S1Q9Y587 144 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 SH3PXD2BA1X283 911 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 RGSL1A5PLK6 1076 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 FAM159BA6NKW6 160 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 OCM2P0CE71 109 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 OCMP0CE72 109 aaPredicted RBP12.22□□□□□ -0.45
SEC11A-206ENST00000558924 AOC1P19801 751 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 PKDCCQ504Y2 493 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 ARCQ7LC44 396 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 THEM5Q8N1Q8 247 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 SMARCD1Q96GM5 515 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 FRMD8Q9BZ67 464 aaPredicted RBP12.22□□□□□ -0.45
SEC11A-206ENST00000558924 UPF3AQ9H1J1 476 aaKnown RBP12.22□□□□□ -0.45
SEC11A-206ENST00000558924 PLAC1Q9HBJ0 212 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 TMLHEQ9NVH6 421 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 RSL24D1Q9UHA3 163 aaKnown RBP12.22□□□□□ -0.45
SEC11A-206ENST00000558924 BCAP29Q9UHQ4 241 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 I6L893 689 aaPredicted RBP12.22□□□□□ -0.45
SEC11A-206ENST00000558924 PAGE1O75459 146 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 RNASEH2AO75792 299 aaKnown RBP12.22□□□□□ -0.45
SEC11A-206ENST00000558924 IRF1P10914 325 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 PRKCHP24723 683 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 STX1BP61266 288 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 GRB14Q14449 540 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 CYP2A13Q16696 494 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 C10orf120Q5SQS8 335 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 UBXN11Q5T124 520 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 GIPC2Q8TF65 315 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 LRRC39Q96DD0 335 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 VPS50Q96JG6 964 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 RPRD1AQ96P16 312 aaPredicted RBP12.22□□□□□ -0.45
SEC11A-206ENST00000558924 POMKQ9H5K3 350 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 SLC38A7Q9NVC3 462 aa12.22□□□□□ -0.45
SEC11A-206ENST00000558924 INPP4BO15327 924 aa12.21□□□□□ -0.45
SEC11A-206ENST00000558924 DAB1O75553 588 aa12.21□□□□□ -0.45
SEC11A-206ENST00000558924 ZBTB11O95625 1053 aaPredicted RBP12.21□□□□□ -0.45
SEC11A-206ENST00000558924 CD247P20963 164 aa12.21□□□□□ -0.45
SEC11A-206ENST00000558924 PGFP49763 221 aa12.21□□□□□ -0.45
SEC11A-206ENST00000558924 NDST2P52849 883 aa12.21□□□□□ -0.45
SEC11A-206ENST00000558924 MRPS6P82932 125 aaKnown RBP12.21□□□□□ -0.45
SEC11A-206ENST00000558924 TBCCQ15814 346 aa12.21□□□□□ -0.45
SEC11A-206ENST00000558924 LDLRAD1Q5T700 205 aa12.21□□□□□ -0.45
SEC11A-206ENST00000558924 DNAJB14Q8TBM8 379 aa12.21□□□□□ -0.45
SEC11A-206ENST00000558924 LPGAT1Q92604 370 aa12.21□□□□□ -0.45
SEC11A-206ENST00000558924 NPY6RQ99463 290 aa12.21□□□□□ -0.45
SEC11A-206ENST00000558924 SORT1Q99523 831 aa12.21□□□□□ -0.45
SEC11A-206ENST00000558924 ZFYVE28Q9HCC9 887 aa12.21□□□□□ -0.45
SEC11A-206ENST00000558924 C1orf232A0A0U1RR37 186 aa12.21□□□□□ -0.46
SEC11A-206ENST00000558924 HDAC3O15379 428 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms