RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 FAM49BQ9NUQ9 324 aa6.27□□□□□ -1.41
ZEB1-211ENST00000558440 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.27□□□□□ -1.41
ZEB1-211ENST00000558440 OSER1Q9NX31 292 aa6.27□□□□□ -1.41
ZEB1-211ENST00000558440 ARHGAP20Q9P2F6 1191 aa6.27□□□□□ -1.41
ZEB1-211ENST00000558440 RASAL2Q9UJF2 1139 aa6.27□□□□□ -1.41
ZEB1-211ENST00000558440 PLA2G4CQ9UP65 541 aa6.27□□□□□ -1.41
ZEB1-211ENST00000558440 ZDHHC9Q9Y397 364 aa6.27□□□□□ -1.41
ZEB1-211ENST00000558440 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.27□□□□□ -1.41
ZEB1-211ENST00000558440 PCDHGA1Q9Y5H4 931 aa6.27□□□□□ -1.41
ZEB1-211ENST00000558440 CLIC4Q9Y696 253 aa6.27□□□□□ -1.41
ZEB1-211ENST00000558440 SLCO1B1Q9Y6L6 691 aa6.27□□□□□ -1.41
ZEB1-211ENST00000558440 UBR5O95071 2799 aaPredicted RBP6.27□□□□□ -1.41
ZEB1-211ENST00000558440 KIF26BQ2KJY2 2108 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 TLN1Q9Y490 2541 aaKnown RBP6.26□□□□□ -1.41
ZEB1-211ENST00000558440 TRBV23-1A0A0A0MS06 115 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 A0A1B0GTQ1 180 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 J3QKU1 62 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 WNT9AO14904 365 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 MATN3O15232 486 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 GPR42O15529 346 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 PAPSS1O43252 624 aaPredicted RBP6.26□□□□□ -1.41
ZEB1-211ENST00000558440 TLX3O43711 291 aaPredicted RBP6.26□□□□□ -1.41
ZEB1-211ENST00000558440 STX6O43752 255 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 TSPAN3O60637 253 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 EXOC3O60645 756 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 KIF20AO95235 890 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 C1SP09871 688 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 CORO1AP31146 461 aaKnown RBP6.26□□□□□ -1.41
ZEB1-211ENST00000558440 HOXD13P35453 343 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 GLRBP48167 497 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 NDST1P52848 882 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 SUMO1P63165 101 aaKnown RBP6.26□□□□□ -1.41
ZEB1-211ENST00000558440 AMPD3Q01432 767 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 CFHR1Q03591 330 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 CEBPZQ03701 1054 aaKnown RBP6.26□□□□□ -1.41
ZEB1-211ENST00000558440 ZBTB16Q05516 673 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 TARDBPQ13148 414 aaKnown RBP eCLIP6.26□□□□□ -1.41
ZEB1-211ENST00000558440 PAK1Q13153 545 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 ICAM4Q14773 271 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 BMT2Q1RMZ1 405 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 HES3Q5TGS1 186 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 LAYNQ6UX15 382 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 CLEC20AQ6ZU45 233 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 RSRC2Q7L4I2 434 aaKnown RBP6.26□□□□□ -1.41
ZEB1-211ENST00000558440 EPM2AIP1Q7L775 607 aaPredicted RBP6.26□□□□□ -1.41
ZEB1-211ENST00000558440 UNC93AQ86WB7 457 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 CIR1Q86X95 450 aaPredicted RBP6.26□□□□□ -1.41
ZEB1-211ENST00000558440 DENND1CQ8IV53 801 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 NELFCDQ8IXH7 590 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 CRYBG2Q8N1P7 616 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 C12orf29Q8N999 325 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 GANCQ8TET4 914 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 GOLGA1Q92805 767 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 PTPRN2Q92932 1015 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 BIRC7Q96CA5 298 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 AJUBAQ96IF1 538 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 CNDP2Q96KP4 475 aaKnown RBP6.26□□□□□ -1.41
ZEB1-211ENST00000558440 SLC2A11Q9BYW1 496 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 CD244Q9BZW8 370 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 DNAI2Q9GZS0 605 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 SDCBP2Q9H190 292 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 TNMDQ9H2S6 317 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 SGK2Q9HBY8 427 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 PNPLA8Q9NP80 782 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 CLIC5Q9NZA1 410 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 CGNQ9P2M7 1197 aaKnown RBP6.26□□□□□ -1.41
ZEB1-211ENST00000558440 HMGXB4Q9UGU5 601 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 PFDN2Q9UHV9 154 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 NCKAP1Q9Y2A7 1128 aa6.26□□□□□ -1.41
ZEB1-211ENST00000558440 DOPEY2Q9Y3R5 2298 aa6.25□□□□□ -1.41
ZEB1-211ENST00000558440 A0A087X0B3 334 aa6.25□□□□□ -1.41
ZEB1-211ENST00000558440 FAM47DPA6NHR8 397 aa6.25□□□□□ -1.41
ZEB1-211ENST00000558440 LRRIQ3A6PVS8 624 aaPredicted RBP6.25□□□□□ -1.41
ZEB1-211ENST00000558440 HHLA1C9JL84 531 aa6.25□□□□□ -1.41
ZEB1-211ENST00000558440 VILLO15195 856 aa6.25□□□□□ -1.41
ZEB1-211ENST00000558440 YKT6O15498 198 aa6.25□□□□□ -1.41
ZEB1-211ENST00000558440 TGFB1I1O43294 461 aa6.25□□□□□ -1.41
ZEB1-211ENST00000558440 IL18BPO95998 194 aa6.25□□□□□ -1.41
ZEB1-211ENST00000558440 KLKB1P03952 638 aa6.25□□□□□ -1.41
ZEB1-211ENST00000558440 RPN1P04843 607 aaKnown RBP6.25□□□□□ -1.41
ZEB1-211ENST00000558440 PDCP20941 246 aa6.25□□□□□ -1.41
ZEB1-211ENST00000558440 ACTN2P35609 894 aa6.25□□□□□ -1.41
ZEB1-211ENST00000558440 ARRB1P49407 418 aaPredicted RBP6.25□□□□□ -1.41
ZEB1-211ENST00000558440 CASP4P49662 377 aa6.25□□□□□ -1.41
ZEB1-211ENST00000558440 KIF11P52732 1056 aa6.25□□□□□ -1.41
ZEB1-211ENST00000558440 CLDN6P56747 220 aa6.25□□□□□ -1.41
ZEB1-211ENST00000558440 RPS14P62263 151 aaKnown RBP6.25□□□□□ -1.41
ZEB1-211ENST00000558440 CXADRP78310 365 aa6.25□□□□□ -1.41
ZEB1-211ENST00000558440 CCDC173Q0VFZ6 552 aa6.25□□□□□ -1.41
ZEB1-211ENST00000558440 DNAJC3Q13217 504 aa6.25□□□□□ -1.41
ZEB1-211ENST00000558440 SGSM1Q2NKQ1 1148 aa6.25□□□□□ -1.41
ZEB1-211ENST00000558440 MPPE1Q53F39 396 aa6.25□□□□□ -1.41
ZEB1-211ENST00000558440 TAF1BQ53T94 588 aaPredicted RBP6.25□□□□□ -1.41
ZEB1-211ENST00000558440 KCNT1Q5JUK3 1230 aa6.25□□□□□ -1.41
ZEB1-211ENST00000558440 FOXB2Q5VYV0 432 aa6.25□□□□□ -1.41
ZEB1-211ENST00000558440 ZNF776Q68DI1 518 aaPredicted RBP6.25□□□□□ -1.41
ZEB1-211ENST00000558440 KIAA0895LQ68EN5 471 aa6.25□□□□□ -1.41
ZEB1-211ENST00000558440 CCDC186Q7Z3E2 898 aa6.25□□□□□ -1.41
ZEB1-211ENST00000558440 MTDHQ86UE4 582 aaKnown RBP6.25□□□□□ -1.41
ZEB1-211ENST00000558440 GATAD2AQ86YP4 633 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms