RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 MMAAQ8IVH4 418 aaKnown RBP10.44□□□□□ -0.74
TPM1-212ENST00000558347 STK40Q8N2I9 435 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 CCDC185Q8N715 623 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 GBP7Q8N8V2 638 aaPredicted RBP10.44□□□□□ -0.74
TPM1-212ENST00000558347 DEFB124Q8NES8 71 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 FRS2Q8WU20 508 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 ARHGEF2Q92974 986 aaKnown RBP10.44□□□□□ -0.74
TPM1-212ENST00000558347 SGSM3Q96HU1 749 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 FEM1AQ9BSK4 669 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 FRMD8P1Q9BZ68 369 aaPredicted RBP10.44□□□□□ -0.74
TPM1-212ENST00000558347 PHACTR1Q9C0D0 580 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 BTBD1Q9H0C5 482 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.44□□□□□ -0.74
TPM1-212ENST00000558347 RCOR3Q9P2K3 495 aaPredicted RBP10.44□□□□□ -0.74
TPM1-212ENST00000558347 EIF2B4Q9UI10 523 aaKnown RBP10.44□□□□□ -0.74
TPM1-212ENST00000558347 AP4E1Q9UPM8 1137 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 DRG1Q9Y295 367 aaKnown RBP10.44□□□□□ -0.74
TPM1-212ENST00000558347 TBC1D30Q9Y2I9 924 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.44□□□□□ -0.74
TPM1-212ENST00000558347 OR51B4Q9Y5P0 310 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 CACNA1EQ15878 2313 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 DOCK4Q8N1I0 1966 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 SPEGQ15772 3267 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 A0A1W2PP55 124 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 DRGXA6NNA5 263 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 E9PAM4 449 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 BCAT2O15382 392 aaPredicted RBP10.43□□□□□ -0.74
TPM1-212ENST00000558347 SNX3O60493 162 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 OPHN1O60890 802 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 TJP3O95049 919 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 SYPP08247 313 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 VIMP08670 466 aaKnown RBP10.43□□□□□ -0.74
TPM1-212ENST00000558347 CSRP1P21291 193 aaKnown RBP10.43□□□□□ -0.74
TPM1-212ENST00000558347 PMLP29590 882 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 L1CAMP32004 1257 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 PSMD8P48556 350 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 ZNF135P52742 658 aaPredicted RBP10.43□□□□□ -0.74
TPM1-212ENST00000558347 METAP1P53582 386 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 SLC18A1P54219 525 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 CDH6P55285 790 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 BNC1Q01954 994 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 SULT2A1Q06520 285 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 GRIK2Q13002 908 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 SEMA3BQ13214 749 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 DPYSL3Q14195 570 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 RASA2Q15283 850 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 CA9Q16790 459 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 ARL13BQ3SXY8 428 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 ZFYVE27Q5T4F4 411 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 IZUMO3Q5VZ72 239 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 PPP1R21Q6ZMI0 780 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 USP30Q70CQ3 517 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 KCTD6Q8NC69 237 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 CKAP2Q8WWK9 683 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 ATG4AQ8WYN0 398 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 SNX19Q92543 992 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 HSPH1Q92598 858 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 BIRC7Q96CA5 298 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 GRAMD1AQ96CP6 724 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 FAF2Q96CS3 445 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 C1orf74Q96LT6 269 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 ZNF670Q9BS34 389 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 HERPUD2Q9BSE4 406 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 TACO1Q9BSH4 297 aaKnown RBP10.43□□□□□ -0.74
TPM1-212ENST00000558347 PCED1AQ9H1Q7 454 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 SGK2Q9HBY8 427 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 PCDH18Q9HCL0 1135 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 KLHL11Q9NVR0 708 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 DNAAF2Q9NVR5 837 aaKnown RBP10.43□□□□□ -0.74
TPM1-212ENST00000558347 FBXL12Q9NXK8 326 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 MPP6Q9NZW5 540 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 VPS28Q9UK41 221 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 SCML1Q9UN30 329 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 SLC12A4Q9UP95 1085 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 R3HDM2Q9Y2K5 976 aaKnown RBP10.43□□□□□ -0.74
TPM1-212ENST00000558347 FRYQ5TBA9 3013 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 PLXNA2O75051 1894 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 IGLV3-10A0A075B6K4 115 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 TMEM120BA0PK00 339 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 DNALI1O14645 258 aaPredicted RBP10.43□□□□□ -0.74
TPM1-212ENST00000558347 LIASO43766 372 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 RNASEH1O60930 286 aaKnown RBP10.43□□□□□ -0.74
TPM1-212ENST00000558347 GJB3O75712 270 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 SUN1O94901 812 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 ACSL3O95573 720 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 IGHV4-34P06331 123 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 CD48P09326 243 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 CEACAM1P13688 526 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 IL4RP24394 825 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 SLC8A1P32418 973 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 NNMTP40261 264 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 SLCO1A2P46721 670 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 VASPP50552 380 aaPredicted RBP10.43□□□□□ -0.74
TPM1-212ENST00000558347 OXCT1P55809 520 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 TFDP2Q14188 446 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 KRT81Q14533 505 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 LONRF1Q17RB8 773 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 EFHC2Q5JST6 749 aa10.43□□□□□ -0.74
TPM1-212ENST00000558347 UBAP2Q5T6F2 1119 aaKnown RBP10.43□□□□□ -0.74
TPM1-212ENST00000558347 ARHGEF18Q6ZSZ5 1173 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms