RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 PNMA8BQ9ULN7 279 aaPredicted RBP12.01□□□□□ -0.49
HERC1-202ENST00000558324 CLCA2Q9UQC9 943 aa12.01□□□□□ -0.49
HERC1-202ENST00000558324 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.01□□□□□ -0.49
HERC1-202ENST00000558324 FREM2Q5SZK8 3169 aa12□□□□□ -0.49
HERC1-202ENST00000558324 LY6G6EA0A0G2JKS1 128 aa12□□□□□ -0.49
HERC1-202ENST00000558324 MYO1FO00160 1098 aa12□□□□□ -0.49
HERC1-202ENST00000558324 CD48P09326 243 aa12□□□□□ -0.49
HERC1-202ENST00000558324 MAXP61244 160 aa12□□□□□ -0.49
HERC1-202ENST00000558324 AP1S1P61966 158 aa12□□□□□ -0.49
HERC1-202ENST00000558324 YPEL5P62699 121 aa12□□□□□ -0.49
HERC1-202ENST00000558324 RALGDSQ12967 914 aa12□□□□□ -0.49
HERC1-202ENST00000558324 MMRN1Q13201 1228 aa12□□□□□ -0.49
HERC1-202ENST00000558324 CDKN3Q16667 212 aa12□□□□□ -0.49
HERC1-202ENST00000558324 ZCCHC8Q6NZY4 707 aaKnown RBP12□□□□□ -0.49
HERC1-202ENST00000558324 MACC1Q6ZN28 852 aa12□□□□□ -0.49
HERC1-202ENST00000558324 NYAP1Q6ZVC0 841 aa12□□□□□ -0.49
HERC1-202ENST00000558324 RD3Q7Z3Z2 195 aa12□□□□□ -0.49
HERC1-202ENST00000558324 HID1Q8IV36 788 aa12□□□□□ -0.49
HERC1-202ENST00000558324 RNF214Q8ND24 703 aa12□□□□□ -0.49
HERC1-202ENST00000558324 DCBLD2Q96PD2 775 aa12□□□□□ -0.49
HERC1-202ENST00000558324 PSKH2Q96QS6 385 aa12□□□□□ -0.49
HERC1-202ENST00000558324 IL12RB2Q99665 862 aa12□□□□□ -0.49
HERC1-202ENST00000558324 LRRC61Q9BV99 259 aa12□□□□□ -0.49
HERC1-202ENST00000558324 DUSP23Q9BVJ7 150 aa12□□□□□ -0.49
HERC1-202ENST00000558324 PACSIN1Q9BY11 444 aa12□□□□□ -0.49
HERC1-202ENST00000558324 SLC13A1Q9BZW2 595 aa12□□□□□ -0.49
HERC1-202ENST00000558324 SPASTQ9UBP0 616 aa12□□□□□ -0.49
HERC1-202ENST00000558324 LHX6Q9UPM6 363 aa12□□□□□ -0.49
HERC1-202ENST00000558324 OR1A2Q9Y585 309 aa12□□□□□ -0.49
HERC1-202ENST00000558324 AK5Q9Y6K8 562 aa12□□□□□ -0.49
HERC1-202ENST00000558324 U3KQA8 63 aa12□□□□□ -0.49
HERC1-202ENST00000558324 CFAP47Q6ZTR5 3102 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 CPED1A4D0V7 1026 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 TMEM110-MUSTN1A8MSY1 372 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 MFSD11O43934 449 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 MAFKO60675 156 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 GCATO75600 419 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 MAP3K6O95382 1288 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 PEX11BO96011 259 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 CELA2BP08218 269 aaPredicted RBP11.99□□□□□ -0.49
HERC1-202ENST00000558324 ELFN1P0C7U0 828 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 SERPINB6P35237 376 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 RENBPP51606 427 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 ADKP55263 362 aaKnown RBP11.99□□□□□ -0.49
HERC1-202ENST00000558324 E2F1Q01094 437 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 PPARDQ03181 441 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 NSUN2Q08J23 767 aaKnown RBP eCLIP11.99□□□□□ -0.49
HERC1-202ENST00000558324 INPP5AQ14642 412 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 HADHQ16836 314 aaKnown RBP11.99□□□□□ -0.49
HERC1-202ENST00000558324 SKOR2Q2VWA4 1001 aaPredicted RBP11.99□□□□□ -0.49
HERC1-202ENST00000558324 ATP13A4Q4VNC1 1196 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 ZFYVE27Q5T4F4 411 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 SPECC1LQ69YQ0 1117 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 GUSBP11Q6P575 273 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 CRTC1Q6UUV9 634 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 ENPP7Q6UWV6 458 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 PGBD5Q8N414 524 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 PLA2G15Q8NCC3 412 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 IFI44Q8TCB0 444 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 NSMCE1Q8WV22 266 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 BTN2A2Q8WVV5 523 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 HNRNPLLQ8WVV9 542 aaKnown RBP11.99□□□□□ -0.49
HERC1-202ENST00000558324 CTNNBL1Q8WYA6 563 aaPredicted RBP11.99□□□□□ -0.49
HERC1-202ENST00000558324 TSACCQ96A04 125 aaPredicted RBP11.99□□□□□ -0.49
HERC1-202ENST00000558324 ECHDC3Q96DC8 303 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 ZNF599Q96NL3 588 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 ABCG4Q9H172 646 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 TSPY26PQ9H489 355 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 DEF6Q9H4E7 631 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 SCUBE2Q9NQ36 999 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 EVA1BQ9NVM1 165 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 NENFQ9UMX5 172 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 GPSM3Q9Y4H4 160 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 PCDHGC4Q9Y5F7 938 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 CSNK1G3Q9Y6M4 447 aa11.99□□□□□ -0.49
HERC1-202ENST00000558324 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.98□□□□□ -0.49
HERC1-202ENST00000558324 TRAFD1O14545 582 aaPredicted RBP11.98□□□□□ -0.49
HERC1-202ENST00000558324 CBFA2T2O43439 604 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 OPA1O60313 960 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 RECQL5O94762 991 aaPredicted RBP11.98□□□□□ -0.49
HERC1-202ENST00000558324 PROSCO94903 275 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 MT-CO3P00414 261 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 CPP00450 1065 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 ANXA6P08133 673 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 TSHRP16473 764 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 HTR1BP28222 390 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 MMP13P45452 471 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 DUSP3P51452 185 aaPredicted RBP11.98□□□□□ -0.49
HERC1-202ENST00000558324 TAS2R40P59535 323 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 POLR2LP62875 67 aaKnown RBP11.98□□□□□ -0.49
HERC1-202ENST00000558324 NFATC4Q14934 902 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 ACOX1Q15067 660 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 NR0B2Q15466 257 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 SLC18A3Q16572 532 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 ALG11Q2TAA5 492 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 COL28A1Q2UY09 1125 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 DENND2CQ68D51 928 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 LIPIQ6XZB0 460 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 DPPA4Q7L190 304 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 EFL1Q7Z2Z2 1120 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms