RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 FZD4Q9ULV1 537 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 LOC285095A0A1B0GVY8 99 aa15.37■□□□□ 0.05
NEDD1-213ENST00000557644 CTAGE15A4D2H0 777 aa15.37■□□□□ 0.05
NEDD1-213ENST00000557644 H0Y858 1186 aa15.37■□□□□ 0.05
NEDD1-213ENST00000557644 ATXN1LP0C7T5 689 aaKnown RBP15.37■□□□□ 0.05
NEDD1-213ENST00000557644 CTAGE8P0CG41 777 aa15.37■□□□□ 0.05
NEDD1-213ENST00000557644 BCKDHBP21953 392 aa15.37■□□□□ 0.05
NEDD1-213ENST00000557644 CA4P22748 312 aa15.37■□□□□ 0.05
NEDD1-213ENST00000557644 CD6P30203 668 aa15.37■□□□□ 0.05
NEDD1-213ENST00000557644 ADRA1AP35348 466 aa15.37■□□□□ 0.05
NEDD1-213ENST00000557644 EPHB1P54762 984 aa15.37■□□□□ 0.05
NEDD1-213ENST00000557644 SEMA5AQ13591 1074 aa15.37■□□□□ 0.05
NEDD1-213ENST00000557644 PTK6Q13882 451 aa15.37■□□□□ 0.05
NEDD1-213ENST00000557644 CTAGE6Q86UF2 777 aa15.37■□□□□ 0.05
NEDD1-213ENST00000557644 CTAGE4Q8IX94 777 aa15.37■□□□□ 0.05
NEDD1-213ENST00000557644 SPOCK2Q92563 424 aa15.37■□□□□ 0.05
NEDD1-213ENST00000557644 RMDN1Q96DB5 314 aa15.37■□□□□ 0.05
NEDD1-213ENST00000557644 FEM1CQ96JP0 617 aa15.37■□□□□ 0.05
NEDD1-213ENST00000557644 RUNDC3BQ96NL0 473 aa15.37■□□□□ 0.05
NEDD1-213ENST00000557644 HINFPQ9BQA5 517 aa15.37■□□□□ 0.05
NEDD1-213ENST00000557644 L2HGDHQ9H9P8 463 aa15.37■□□□□ 0.05
NEDD1-213ENST00000557644 WSB2Q9NYS7 404 aaPredicted RBP15.37■□□□□ 0.05
NEDD1-213ENST00000557644 ASIC3Q9UHC3 531 aa15.37■□□□□ 0.05
NEDD1-213ENST00000557644 FADS3Q9Y5Q0 445 aa15.37■□□□□ 0.05
NEDD1-213ENST00000557644 EML5Q05BV3 1969 aa15.37■□□□□ 0.05
NEDD1-213ENST00000557644 FRYLO94915 3013 aa15.37■□□□□ 0.05
NEDD1-213ENST00000557644 TCRBV7S3A2A0A539 114 aa15.36■□□□□ 0.05
NEDD1-213ENST00000557644 ANKRD66B4E2M5 251 aa15.36■□□□□ 0.05
NEDD1-213ENST00000557644 AREL1O15033 823 aa15.36■□□□□ 0.05
NEDD1-213ENST00000557644 PLRG1O43660 514 aaKnown RBP15.36■□□□□ 0.05
NEDD1-213ENST00000557644 AP2A1O95782 977 aa15.36■□□□□ 0.05
NEDD1-213ENST00000557644 PIRTP0C851 137 aa15.36■□□□□ 0.05
NEDD1-213ENST00000557644 XPAP23025 273 aaPredicted RBP15.36■□□□□ 0.05
NEDD1-213ENST00000557644 GRIA1P42261 906 aa15.36■□□□□ 0.05
NEDD1-213ENST00000557644 FAM193AP78312 1265 aa15.36■□□□□ 0.05
NEDD1-213ENST00000557644 DHX34Q14147 1143 aaKnown RBP15.36■□□□□ 0.05
NEDD1-213ENST00000557644 QPCTQ16769 361 aa15.36■□□□□ 0.05
NEDD1-213ENST00000557644 ZNF528Q3MIS6 628 aa15.36■□□□□ 0.05
NEDD1-213ENST00000557644 SIRPB2Q5JXA9 342 aa15.36■□□□□ 0.05
NEDD1-213ENST00000557644 DEFB119Q8N690 84 aa15.36■□□□□ 0.05
NEDD1-213ENST00000557644 MNS1Q8NEH6 495 aa15.36■□□□□ 0.05
NEDD1-213ENST00000557644 TRIM31Q9BZY9 425 aa15.36■□□□□ 0.05
NEDD1-213ENST00000557644 PHTF1Q9UMS5 762 aa15.36■□□□□ 0.05
NEDD1-213ENST00000557644 ARIH1Q9Y4X5 557 aaPredicted RBP15.36■□□□□ 0.05
NEDD1-213ENST00000557644 NPIPB15A6NHN6 443 aaPredicted RBP15.36■□□□□ 0.05
NEDD1-213ENST00000557644 E7EVH7 732 aa15.36■□□□□ 0.05
NEDD1-213ENST00000557644 RIOK3O14730 519 aaKnown RBP15.36■□□□□ 0.05
NEDD1-213ENST00000557644 HRO43593 1189 aa15.36■□□□□ 0.05
NEDD1-213ENST00000557644 NDST3O95803 873 aa15.36■□□□□ 0.05
NEDD1-213ENST00000557644 ADCY8P40145 1251 aa15.36■□□□□ 0.05
NEDD1-213ENST00000557644 POLR2LP62875 67 aaKnown RBP15.36■□□□□ 0.05
NEDD1-213ENST00000557644 SLC1A5Q15758 541 aa15.36■□□□□ 0.05
NEDD1-213ENST00000557644 RANBP10Q6VN20 620 aa15.36■□□□□ 0.05
NEDD1-213ENST00000557644 GPR174Q9BXC1 333 aa15.36■□□□□ 0.05
NEDD1-213ENST00000557644 ADGRE3Q9BY15 652 aa15.36■□□□□ 0.05
NEDD1-213ENST00000557644 FAM126AQ9BYI3 521 aaPredicted RBP15.36■□□□□ 0.05
NEDD1-213ENST00000557644 ZSCAN32Q9NX65 697 aa15.36■□□□□ 0.05
NEDD1-213ENST00000557644 SDK1Q7Z5N4 2213 aa15.36■□□□□ 0.05
NEDD1-213ENST00000557644 ABCA7Q8IZY2 2146 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 A0A0J9YYE9 177 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 NEMP1O14524 444 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 TRBC1P01850 177 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 HNF1BP35680 557 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 LMAN1P49257 510 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 NUBP1P53384 320 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 ANKRD22Q5VYY1 191 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 C4orf22Q6V702 233 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 TSPAN33Q86UF1 283 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 CEP112Q8N8E3 955 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 PRSS33Q8NF86 280 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 CPT1BQ92523 772 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 SPACA7Q96KW9 195 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 PPP1R2P1Q96PQ5 205 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 TBL1YQ9BQ87 522 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 LRRC1Q9BTT6 524 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 WRAP53Q9BUR4 548 aaKnown RBP15.35■□□□□ 0.05
NEDD1-213ENST00000557644 C6orf106Q9H6K1 298 aaPredicted RBP15.35■□□□□ 0.05
NEDD1-213ENST00000557644 SGK2Q9HBY8 427 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 B4GALT6Q9UBX8 382 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.35■□□□□ 0.05
NEDD1-213ENST00000557644 TBC1D3DA0A087WVF3 549 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 TBC1D3IA0A087WXS9 549 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 TBC1D3EA0A087X179 549 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 TBC1D3KA0A087X1G2 549 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 A0A1W2PQ67 120 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 GOLGA6CA6NDK9 693 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 GOLGA6BA6NDN3 693 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 TBC1D3FA6NER0 549 aaPredicted RBP15.35■□□□□ 0.05
NEDD1-213ENST00000557644 TBC1D3LB9A6J9 549 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 SLC7A4O43246 635 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 RPP40O75818 363 aaKnown RBP15.35■□□□□ 0.05
NEDD1-213ENST00000557644 SEMA4FO95754 770 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 EPOP01588 193 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 TBC1D3HP0C7X1 549 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 GOLGA6DP0CG33 693 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 IVDP26440 423 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 OXTRP30559 389 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 MMP12P39900 470 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 GRIA4P48058 902 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 TCF15Q12870 199 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms