RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 CTHRC1Q96CG8 243 aa3.47□□□□□ -1.85
FOXN3-217ENST00000557572 SIPA1Q96FS4 1042 aa3.47□□□□□ -1.85
FOXN3-217ENST00000557572 PDLIM5Q96HC4 596 aaKnown RBP3.47□□□□□ -1.85
FOXN3-217ENST00000557572 VPS39Q96JC1 886 aa3.47□□□□□ -1.85
FOXN3-217ENST00000557572 FER1L6-AS2Q96M78 137 aa3.47□□□□□ -1.85
FOXN3-217ENST00000557572 CITED2Q99967 270 aaPredicted RBP3.47□□□□□ -1.85
FOXN3-217ENST00000557572 STRA6Q9BX79 667 aa3.47□□□□□ -1.85
FOXN3-217ENST00000557572 KLHL4Q9C0H6 718 aa3.47□□□□□ -1.85
FOXN3-217ENST00000557572 MID1IP1Q9NPA3 183 aa3.47□□□□□ -1.85
FOXN3-217ENST00000557572 PAPOLBQ9NRJ5 636 aaKnown RBP3.47□□□□□ -1.85
FOXN3-217ENST00000557572 SNTG1Q9NSN8 517 aa3.47□□□□□ -1.85
FOXN3-217ENST00000557572 HCFC1R1Q9NWW0 138 aa3.47□□□□□ -1.85
FOXN3-217ENST00000557572 TAB2Q9NYJ8 693 aa3.47□□□□□ -1.85
FOXN3-217ENST00000557572 NDUFAF4Q9P032 175 aa3.47□□□□□ -1.85
FOXN3-217ENST00000557572 XPR1Q9UBH6 696 aa3.47□□□□□ -1.85
FOXN3-217ENST00000557572 MID2Q9UJV3 735 aa3.47□□□□□ -1.85
FOXN3-217ENST00000557572 MED16Q9Y2X0 877 aa3.47□□□□□ -1.85
FOXN3-217ENST00000557572 FAM90A20PA6NIJ5 464 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 C2orf81A6NN90 581 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 AP4M1O00189 453 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 PSMD9O00233 223 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 SCAMP1O15126 338 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 RIPK2O43353 540 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 KIF5CO60282 957 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 PSMD10O75832 226 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 UNC5CO95185 931 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 CSPG5O95196 566 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 GCNT3O95395 438 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 METTL18O95568 372 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 GGPS1O95749 300 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 TPOP07202 933 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 GRPP07492 148 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 HEXBP07686 556 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 HMOX1P09601 288 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 CPA1P15085 419 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 EEF1DP29692 281 aaKnown RBP3.46□□□□□ -1.86
FOXN3-217ENST00000557572 ARRB2P32121 409 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 PSMC2P35998 433 aaKnown RBP3.46□□□□□ -1.86
FOXN3-217ENST00000557572 MTHFRP42898 656 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 HTD2P86397 168 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 GBE1Q04446 702 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 CBX3Q13185 183 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 CAMK2DQ13557 499 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 MED22Q15528 200 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 OASLQ15646 514 aaKnown RBP3.46□□□□□ -1.86
FOXN3-217ENST00000557572 KRTAP13-3Q3SY46 172 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 MGAT5BQ3V5L5 792 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 AWAT1Q58HT5 328 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 TCP11X2Q5H9J9 407 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.46□□□□□ -1.86
FOXN3-217ENST00000557572 TTC39AQ5SRH9 613 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 DCAF12L1Q5VU92 463 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 INO80CQ6PI98 192 aaPredicted RBP3.46□□□□□ -1.86
FOXN3-217ENST00000557572 SLC30A9Q6PML9 568 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 MEX3BQ6ZN04 569 aaKnown RBP3.46□□□□□ -1.86
FOXN3-217ENST00000557572 LRRC8DQ7L1W4 858 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 TMEM110Q86TL2 294 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 CCDC28AQ8IWP9 274 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 RNF168Q8IYW5 571 aaPredicted RBP3.46□□□□□ -1.86
FOXN3-217ENST00000557572 FRMD1Q8N878 549 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 NFKBIDQ8NI38 313 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 CEP76Q8TAP6 659 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 SMCR8Q8TEV9 937 aaPredicted RBP3.46□□□□□ -1.86
FOXN3-217ENST00000557572 ARHGEF2Q92974 986 aaKnown RBP3.46□□□□□ -1.86
FOXN3-217ENST00000557572 BICD1Q96G01 975 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 LBHD1Q9BQE6 289 aaPredicted RBP3.46□□□□□ -1.86
FOXN3-217ENST00000557572 CRACR2AQ9BSW2 395 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 APOL6Q9BWW8 343 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 ZNF518BQ9C0D4 1074 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 C1orf21Q9H246 121 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 LTB4R2Q9NPC1 389 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 TAS2R10Q9NYW0 307 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 NINJ2Q9NZG7 142 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 ACTR3BQ9P1U1 418 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 CACNG4Q9UBN1 327 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 ANAPC5Q9UJX4 755 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 CPSF3Q9UKF6 684 aaKnown RBP3.46□□□□□ -1.86
FOXN3-217ENST00000557572 ANGPTL3Q9Y5C1 460 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 PCDHGA5Q9Y5G8 931 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 PCDHGA1Q9Y5H4 931 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 SNX14Q9Y5W7 946 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 AP1M2Q9Y6Q5 423 aa3.46□□□□□ -1.86
FOXN3-217ENST00000557572 GPR75-ASB3A0A0A6YYF3 556 aa3.45□□□□□ -1.86
FOXN3-217ENST00000557572 hCG_1809904A0A1W2PP81 198 aa3.45□□□□□ -1.86
FOXN3-217ENST00000557572 A0A1W2PPE2 198 aa3.45□□□□□ -1.86
FOXN3-217ENST00000557572 A0A1W2PR64 198 aa3.45□□□□□ -1.86
FOXN3-217ENST00000557572 ZSCAN5CA6NGD5 496 aaPredicted RBP3.45□□□□□ -1.86
FOXN3-217ENST00000557572 CACNB4O00305 520 aaPredicted RBP3.45□□□□□ -1.86
FOXN3-217ENST00000557572 DNM1LO00429 736 aa3.45□□□□□ -1.86
FOXN3-217ENST00000557572 TNPO2O14787 897 aaKnown RBP3.45□□□□□ -1.86
FOXN3-217ENST00000557572 TLX3O43711 291 aaPredicted RBP3.45□□□□□ -1.86
FOXN3-217ENST00000557572 PPP6R2O75170 966 aa3.45□□□□□ -1.86
FOXN3-217ENST00000557572 NTSR2O95665 410 aa3.45□□□□□ -1.86
FOXN3-217ENST00000557572 TUBBP07437 444 aa3.45□□□□□ -1.86
FOXN3-217ENST00000557572 UMODP07911 640 aa3.45□□□□□ -1.86
FOXN3-217ENST00000557572 ANXA6P08133 673 aa3.45□□□□□ -1.86
FOXN3-217ENST00000557572 KCNA3P22001 575 aa3.45□□□□□ -1.86
FOXN3-217ENST00000557572 NFKBIAP25963 317 aa3.45□□□□□ -1.86
FOXN3-217ENST00000557572 HOXC8P31273 242 aa3.45□□□□□ -1.86
FOXN3-217ENST00000557572 IL15P40933 162 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms