RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 ITM2BQ9Y287 266 aa13.92□□□□□ -0.18
VPS33B-206ENST00000557358 ALG6Q9Y672 507 aa13.92□□□□□ -0.18
VPS33B-206ENST00000557358 SPAARA0A1B0GVQ0 90 aa13.91□□□□□ -0.18
VPS33B-206ENST00000557358 NEMP2A6NFY4 417 aa13.91□□□□□ -0.18
VPS33B-206ENST00000557358 RIOK3O14730 519 aaKnown RBP13.91□□□□□ -0.18
VPS33B-206ENST00000557358 WNT9AO14904 365 aa13.91□□□□□ -0.18
VPS33B-206ENST00000557358 BUB1BO60566 1050 aaPredicted RBP13.91□□□□□ -0.18
VPS33B-206ENST00000557358 ZRANB2O95218 330 aaKnown RBP eCLIP13.91□□□□□ -0.18
VPS33B-206ENST00000557358 CPP00450 1065 aa13.91□□□□□ -0.18
VPS33B-206ENST00000557358 CCNB1P14635 433 aa13.91□□□□□ -0.18
VPS33B-206ENST00000557358 HTR1BP28222 390 aa13.91□□□□□ -0.18
VPS33B-206ENST00000557358 EPHA8P29322 1005 aaPredicted RBP13.91□□□□□ -0.18
VPS33B-206ENST00000557358 RGRP47804 291 aa13.91□□□□□ -0.18
VPS33B-206ENST00000557358 CLDN2P57739 230 aa13.91□□□□□ -0.18
VPS33B-206ENST00000557358 HNRNPKP61978 463 aaKnown RBP eCLIP13.91□□□□□ -0.18
VPS33B-206ENST00000557358 YPEL5P62699 121 aa13.91□□□□□ -0.18
VPS33B-206ENST00000557358 KIF5AQ12840 1032 aa13.91□□□□□ -0.18
VPS33B-206ENST00000557358 FOXC1Q12948 553 aa13.91□□□□□ -0.18
VPS33B-206ENST00000557358 LRRC14Q15048 493 aa13.91□□□□□ -0.18
VPS33B-206ENST00000557358 CCDC181Q5TID7 509 aa13.91□□□□□ -0.18
VPS33B-206ENST00000557358 USP45Q70EL2 814 aa13.91□□□□□ -0.18
VPS33B-206ENST00000557358 TP53INP2Q8IXH6 220 aa13.91□□□□□ -0.18
VPS33B-206ENST00000557358 RCOR2Q8IZ40 523 aa13.91□□□□□ -0.18
VPS33B-206ENST00000557358 OR13H1Q8NG92 308 aa13.91□□□□□ -0.18
VPS33B-206ENST00000557358 RNF25Q96BH1 459 aaPredicted RBP13.91□□□□□ -0.18
VPS33B-206ENST00000557358 SEMA3CQ99985 751 aa13.91□□□□□ -0.18
VPS33B-206ENST00000557358 DNPEPQ9ULA0 475 aa13.91□□□□□ -0.18
VPS33B-206ENST00000557358 PHTF1Q9UMS5 762 aa13.91□□□□□ -0.18
VPS33B-206ENST00000557358 CA5BQ9Y2D0 317 aa13.91□□□□□ -0.18
VPS33B-206ENST00000557358 TNFSF14O43557 240 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 FECHP22830 423 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 MMP12P39900 470 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 TNNT3P45378 269 aaPredicted RBP13.9□□□□□ -0.18
VPS33B-206ENST00000557358 NR2C2P49116 596 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 MAXP61244 160 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 GBE1Q04446 702 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 AP1B1Q10567 949 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 ARHGEF7Q14155 803 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 TFDP3Q5H9I0 405 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 PRAMEF14Q5SWL7 426 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 DBX2Q6ZNG2 339 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 GCNT7Q6ZNI0 430 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 GLRX5Q86SX6 157 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 PARGQ86W56 976 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 CPNE8Q86YQ8 564 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 SYCE1Q8N0S2 351 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 TEX26Q8N6G2 289 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 PQLC3Q8N755 202 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 CCDC112Q8NEF3 446 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 KIAA1524Q8TCG1 905 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 BTN2A2Q8WVV5 523 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 MAML1Q92585 1016 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 ECHDC3Q96DC8 303 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 CAMK1GQ96NX5 476 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 NOD2Q9HC29 1040 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 DNAJC28Q9NX36 388 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 DTLQ9NZJ0 730 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 GGT7Q9UJ14 662 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 HYOU1Q9Y4L1 999 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 PCDHGC4Q9Y5F7 938 aa13.9□□□□□ -0.18
VPS33B-206ENST00000557358 TDRD6O60522 2096 aaKnown RBP13.9□□□□□ -0.18
VPS33B-206ENST00000557358 BTNL10A8MVZ5 291 aa13.89□□□□□ -0.19
VPS33B-206ENST00000557358 MUSKO15146 869 aa13.89□□□□□ -0.19
VPS33B-206ENST00000557358 MTSS1O43312 755 aa13.89□□□□□ -0.19
VPS33B-206ENST00000557358 HTRA2O43464 458 aaPredicted RBP13.89□□□□□ -0.19
VPS33B-206ENST00000557358 MAP3K6O95382 1288 aa13.89□□□□□ -0.19
VPS33B-206ENST00000557358 LDOC1O95751 146 aaPredicted RBP13.89□□□□□ -0.19
VPS33B-206ENST00000557358 CDK4P11802 303 aa13.89□□□□□ -0.19
VPS33B-206ENST00000557358 C6P13671 934 aa13.89□□□□□ -0.19
VPS33B-206ENST00000557358 CR2P20023 1033 aa13.89□□□□□ -0.19
VPS33B-206ENST00000557358 LIG3P49916 1009 aa13.89□□□□□ -0.19
VPS33B-206ENST00000557358 BLKP51451 505 aa13.89□□□□□ -0.19
VPS33B-206ENST00000557358 VAV2P52735 878 aa13.89□□□□□ -0.19
VPS33B-206ENST00000557358 DYNLT1P63172 113 aa13.89□□□□□ -0.19
VPS33B-206ENST00000557358 PPIDQ08752 370 aaKnown RBP13.89□□□□□ -0.19
VPS33B-206ENST00000557358 PDE1CQ14123 709 aaPredicted RBP13.89□□□□□ -0.19
VPS33B-206ENST00000557358 FGL2Q14314 439 aa13.89□□□□□ -0.19
VPS33B-206ENST00000557358 KAZNQ674X7 775 aa13.89□□□□□ -0.19
VPS33B-206ENST00000557358 SLC9A4Q6AI14 798 aa13.89□□□□□ -0.19
VPS33B-206ENST00000557358 DPPA4Q7L190 304 aa13.89□□□□□ -0.19
VPS33B-206ENST00000557358 SPATS2Q86XZ4 545 aaKnown RBP13.89□□□□□ -0.19
VPS33B-206ENST00000557358 GATAD2AQ86YP4 633 aa13.89□□□□□ -0.19
VPS33B-206ENST00000557358 LRRC8AQ8IWT6 810 aa13.89□□□□□ -0.19
VPS33B-206ENST00000557358 KATNAL2Q8IYT4 538 aa13.89□□□□□ -0.19
VPS33B-206ENST00000557358 TPCN2Q8NHX9 752 aa13.89□□□□□ -0.19
VPS33B-206ENST00000557358 SAP25Q8TEE9 199 aa13.89□□□□□ -0.19
VPS33B-206ENST00000557358 P3H4Q92791 437 aa13.89□□□□□ -0.19
VPS33B-206ENST00000557358 NCOR2Q9Y618 2525 aa13.89□□□□□ -0.19
VPS33B-206ENST00000557358 SPTY2D1-AS1A0A0U1RR47 76 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 CCDC66A2RUB6 948 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 POM121BA6NF01 834 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 PDE2AO00408 941 aaPredicted RBP13.88□□□□□ -0.19
VPS33B-206ENST00000557358 TRAFD1O14545 582 aaPredicted RBP13.88□□□□□ -0.19
VPS33B-206ENST00000557358 RAD51BO15315 384 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 CST8O60676 142 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 CBFA2T3O75081 653 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 PEX11BO96011 259 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 JCHAINP01591 159 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 FTH1P19P0C7X4 201 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 TGM2P21980 687 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms