RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 PCDH15Q96QU1 1955 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 ADAMTS9Q9P2N4 1935 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 DRGXA6NNA5 263 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 TTC34A8MYJ7 566 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 GFPT2O94808 682 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 SEMA4FO95754 770 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 CYP1A1P04798 512 aaPredicted RBP10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 MMEP08473 750 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 RBP3P10745 1247 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 STAT1P42224 750 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 COPB1P53618 953 aaKnown RBP10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 CDH4P55283 916 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 JAM2P57087 298 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 POLR2FP61218 127 aaKnown RBP10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 NOMO3P69849 1222 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 CDR2Q01850 454 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 MYL5Q02045 173 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 DEUP1Q05D60 604 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 CST6Q15828 149 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 STX1AQ16623 288 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 FAM102AQ5T9C2 384 aaPredicted RBP10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 TAF3Q5VWG9 929 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 LRSAM1Q6UWE0 723 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 TRIM72Q6ZMU5 477 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 CDH24Q86UP0 819 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 ZC3H7AQ8IWR0 971 aaKnown RBP10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 DHX40Q8IX18 779 aaKnown RBP10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 BIRC7Q96CA5 298 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 ALG14Q96F25 216 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 RPL10LQ96L21 214 aaKnown RBP10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 SPAG5Q96R06 1193 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 HAPLN3Q96S86 360 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 FEM1AQ9BSK4 669 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 SIK2Q9H0K1 926 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 MTG2Q9H4K7 406 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 CYP4F12Q9HCS2 524 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 FSCN3Q9NQT6 498 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 ANLNQ9NQW6 1124 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 FAM207AQ9NSI2 230 aaPredicted RBP10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 PIGVQ9NUD9 493 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 GFOD1Q9NXC2 390 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 FBXL12Q9NXK8 326 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 EIF2B4Q9UI10 523 aaKnown RBP10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 TMEM59LQ9UK28 342 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 VANGL2Q9ULK5 521 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 FZD4Q9ULV1 537 aa10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 TPX2Q9ULW0 747 aaKnown RBP10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.06□□□□□ -0.8
HNRNPC-228ENST00000557033 GJB3O75712 270 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 ENDOD1O94919 500 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 ADCY5O95622 1261 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 ZNF883P0CG24 379 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 CD59P13987 128 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 PDGFRAP16234 1089 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 ZNF18P17022 549 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 C5AR1P21730 350 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 MMP8P22894 467 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 CD27P26842 260 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 SLC8A1P32418 973 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 SULT1E1P49888 294 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 MECP2P51608 486 aaKnown RBP10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 AFF3P51826 1226 aaKnown RBP10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 GRIK2Q13002 908 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 ELAVL3Q14576 367 aaKnown RBP10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 GRM3Q14832 879 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 ODF1Q14990 250 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 DPY19L1Q2PZI1 675 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 CCDC183Q5T5S1 534 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 OTUD1Q5VV17 481 aaPredicted RBP10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 NAA35Q5VZE5 725 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 LETMD1Q6P1Q0 360 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 LRRC31Q6UY01 552 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 BNIPLQ7Z465 357 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 SETD3Q86TU7 594 aaPredicted RBP10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 CACUL1Q86Y37 369 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 MMAAQ8IVH4 418 aaKnown RBP10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 ZCCHC9Q8N567 271 aaKnown RBP10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 CLRN3Q8NCR9 226 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 DEFB124Q8NES8 71 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 NEK11Q8NG66 645 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 PCDH19Q8TAB3 1148 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 GANCQ8TET4 914 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 CPA5Q8WXQ8 436 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 TBCBQ99426 244 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 OMDQ99983 421 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 NAT10Q9H0A0 1025 aaKnown RBP10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 C6orf106Q9H6K1 298 aaPredicted RBP10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 RETREG1Q9H6L5 497 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 NLRC4Q9NPP4 1024 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 SLC25A13Q9UJS0 675 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 NOCTQ9UK39 431 aaKnown RBP10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 SIK3Q9Y2K2 1263 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 COQ6Q9Y2Z9 468 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 OR51B4Q9Y5P0 310 aa10.05□□□□□ -0.8
HNRNPC-228ENST00000557033 IGLV3-10A0A075B6K4 115 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 LRRC72A6NJI9 287 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 LGALS16A8MUM7 142 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 MID1O15344 667 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 RNASEH2AO75792 299 aaKnown RBP10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 CER1O95813 267 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms