RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 FPGTO14772 594 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 MTSS1O43312 755 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 MMP20O60882 483 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 TJP3O95049 919 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 ZNF883P0CG24 379 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 PRLRP16471 622 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 PTPN7P35236 360 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 CTSKP43235 329 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 ADCY2Q08462 1091 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 XRCC4Q13426 336 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 LLGL1Q15334 1064 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 ZNF423Q2M1K9 1284 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 LRRC73Q5JTD7 316 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 ARMC12Q5T9G4 340 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 BBS12Q6ZW61 710 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 ZSWIM9Q86XI8 627 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 DCP2Q8IU60 420 aaKnown RBP10.76□□□□□ -0.69
LINC00239-201ENST00000556973 NDUFAF2Q8N183 169 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 TMEM145Q8NBT3 493 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 PDCD6IPQ8WUM4 868 aaKnown RBP10.76□□□□□ -0.69
LINC00239-201ENST00000556973 CENPTQ96BT3 561 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 HES6Q96HZ4 224 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 BMFQ96LC9 184 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 C1QTNF7Q9BXJ2 289 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 OSBPL8Q9BZF1 889 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 ERVMER34-1Q9H9K5 563 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 GDF3Q9NR23 364 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 PPIL1Q9Y3C6 166 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 PCDHB9Q9Y5E1 797 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 GPR179Q6PRD1 2367 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 RIF1Q5UIP0 2472 aaKnown RBP10.75□□□□□ -0.69
LINC00239-201ENST00000556973 HACD1B0YJ81 288 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 APOC4-APOC2K7ER74 178 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 KCNK3O14649 394 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 DDX3YO15523 660 aaKnown RBP10.75□□□□□ -0.69
LINC00239-201ENST00000556973 FZD6O60353 706 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 PGLSO95336 258 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 FTCDO95954 541 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 CPP00450 1065 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 APOC2P02655 101 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 HLA-DQB2P05538 268 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 THEGLP0DJG4 465 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 PYGMP11217 842 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 PECAM1P16284 738 aaPredicted RBP10.75□□□□□ -0.69
LINC00239-201ENST00000556973 CA4P22748 312 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 MMP12P39900 470 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 NXPH1P58417 271 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 FAM193AP78312 1265 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 DSC2Q02487 901 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 TRAF2Q12933 501 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 SUZ12Q15022 739 aaKnown RBP10.75□□□□□ -0.69
LINC00239-201ENST00000556973 AGERQ15109 404 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 PRKD1Q15139 912 aaPredicted RBP10.75□□□□□ -0.69
LINC00239-201ENST00000556973 TEX44Q53QW1 395 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 CCDC181Q5TID7 509 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 LAYNQ6UX15 382 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 DBX2Q6ZNG2 339 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 DGLUCYQ7Z3D6 616 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 ABI3BPQ7Z7G0 1075 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 OXR1Q8N573 874 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 CNTD1Q8N815 330 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 DENND6BQ8NEG7 585 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 OR2I1PQ8NGU4 316 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 ARRDC2Q8TBH0 407 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 ALG3Q92685 438 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 SCRN2Q96FV2 425 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 AGAP3Q96P47 875 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 ELF4Q99607 663 aaPredicted RBP10.75□□□□□ -0.69
LINC00239-201ENST00000556973 KLF6Q99612 283 aaPredicted RBP10.75□□□□□ -0.69
LINC00239-201ENST00000556973 WRAP53Q9BUR4 548 aaKnown RBP10.75□□□□□ -0.69
LINC00239-201ENST00000556973 IL21RQ9HBE5 538 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 FZD3Q9NPG1 666 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 LZTFL1Q9NQ48 299 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 TM7SF3Q9NS93 570 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 TTLL3Q9Y4R7 772 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 PCDHGB2Q9Y5G2 931 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 RAI2Q9Y5P3 530 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 CAPN6Q9Y6Q1 641 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 CFAP54Q96N23 3096 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 EP300Q09472 2414 aaPredicted RBP10.75□□□□□ -0.69
LINC00239-201ENST00000556973 PIEZO1Q92508 2521 aa10.75□□□□□ -0.69
LINC00239-201ENST00000556973 GON4LQ3T8J9 2241 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 POM121BA6NF01 834 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 A6NNZ2 444 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 H0Y8X5 98 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 TOR1BO14657 336 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 RAD51BO15315 384 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 LZTS3O60299 673 aaPredicted RBP10.74□□□□□ -0.69
LINC00239-201ENST00000556973 PTMAP06454 111 aaKnown RBP10.74□□□□□ -0.69
LINC00239-201ENST00000556973 PDHA1P08559 390 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 C6P13671 934 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 CD59P13987 128 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 CSRP1P21291 193 aaKnown RBP10.74□□□□□ -0.69
LINC00239-201ENST00000556973 RABIFP47224 123 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 RXRGP48443 463 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 ARRB1P49407 418 aaPredicted RBP10.74□□□□□ -0.69
LINC00239-201ENST00000556973 LIG3P49916 1009 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 CLDN2P57739 230 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 RPL26P61254 145 aaKnown RBP10.74□□□□□ -0.69
LINC00239-201ENST00000556973 NIPAL4Q0D2K0 466 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms