RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 LATO43561 262 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 TSPAN6O43657 245 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 LIASO43766 372 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 FZD6O60353 706 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 MT-CYBP00156 380 aaPredicted RBP17.6■□□□□ 0.41
SHMT2-225ENST00000556798 CTPS1P17812 591 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 CD27P26842 260 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 GDF10P55107 478 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 FAM193AP78312 1265 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 PTPRRQ15256 657 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 PCSK7Q16549 785 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 ZNF284Q2VY69 593 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 TMEM259Q4ZIN3 620 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 PLA2G2CQ5R387 149 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 PEAR1Q5VY43 1037 aaPredicted RBP17.6■□□□□ 0.41
SHMT2-225ENST00000556798 KIAA1161Q6NSJ0 714 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 ERAP2Q6P179 960 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 FAM71DQ8N9W8 422 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 CCDC110Q8TBZ0 833 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 PBKQ96KB5 322 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 SLC6A18Q96N87 628 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 SMIM14Q96QK8 99 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 MYOCQ99972 504 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 FERMT1Q9BQL6 677 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 TMEM121Q9BTD3 319 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 KCND1Q9NSA2 647 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 SMARCAL1Q9NZC9 954 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 RSPH14Q9UHP6 348 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 SNX12Q9UMY4 172 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 LAMA1P25391 3075 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 ZNF292O60281 2723 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 MYLKQ15746 1914 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 A0A1W2PPC4 97 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 ZNF185O15231 689 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 FANCGO15287 622 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 SLC31A1O15431 190 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 MMP20O60882 483 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 PMPCBO75439 489 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 STK10O94804 968 aaKnown RBP17.59■□□□□ 0.41
SHMT2-225ENST00000556798 MMP12P39900 470 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 POLR2LP62875 67 aaKnown RBP17.59■□□□□ 0.41
SHMT2-225ENST00000556798 ELP6Q0PNE2 266 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 RALGDSQ12967 914 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 FGL2Q14314 439 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 OASLQ15646 514 aaKnown RBP17.59■□□□□ 0.41
SHMT2-225ENST00000556798 ANKRD20A2Q5SQ80 823 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 ANKRD20A1Q5TYW2 823 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 ANKRD20A3Q5VUR7 823 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 NEK5Q6P3R8 708 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 LAYNQ6UX15 382 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 KDELC2Q7Z4H8 507 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 LPCAT1Q8NF37 534 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 C1orf216Q8TAB5 229 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 CXorf40AQ8TE69 158 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 PIH1D2Q8WWB5 315 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 FEM1CQ96JP0 617 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 SPATA13Q96N96 652 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 PCDH9Q9HC56 1237 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 FZD3Q9NPG1 666 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 FSCN3Q9NQT6 498 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 SEMA4GQ9NTN9 838 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 B4GALT6Q9UBX8 382 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 TRHDEQ9UKU6 1024 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 PHTF1Q9UMS5 762 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 CA5BQ9Y2D0 317 aa17.59■□□□□ 0.41
SHMT2-225ENST00000556798 GVINP1Q7Z2Y8 2422 aa17.58■□□□□ 0.41
SHMT2-225ENST00000556798 IGLON5A6NGN9 336 aa17.58■□□□□ 0.4
SHMT2-225ENST00000556798 WNT9AO14904 365 aa17.58■□□□□ 0.4
SHMT2-225ENST00000556798 BCAT2O15382 392 aaPredicted RBP17.58■□□□□ 0.4
SHMT2-225ENST00000556798 PRLP01236 227 aa17.58■□□□□ 0.4
SHMT2-225ENST00000556798 CFIP05156 583 aa17.58■□□□□ 0.4
SHMT2-225ENST00000556798 ALPIP09923 528 aa17.58■□□□□ 0.4
SHMT2-225ENST00000556798 CA4P22748 312 aa17.58■□□□□ 0.4
SHMT2-225ENST00000556798 PSMB4P28070 264 aa17.58■□□□□ 0.4
SHMT2-225ENST00000556798 SUOXP51687 545 aa17.58■□□□□ 0.4
SHMT2-225ENST00000556798 EPHB1P54762 984 aa17.58■□□□□ 0.4
SHMT2-225ENST00000556798 RPS21P63220 83 aaKnown RBP17.58■□□□□ 0.4
SHMT2-225ENST00000556798 GALNT3Q14435 633 aa17.58■□□□□ 0.4
SHMT2-225ENST00000556798 SF3A2Q15428 464 aaKnown RBP17.58■□□□□ 0.4
SHMT2-225ENST00000556798 TMEM52BQ4KMG9 183 aa17.58■□□□□ 0.4
SHMT2-225ENST00000556798 SETMARQ53H47 684 aaPredicted RBP17.58■□□□□ 0.4
SHMT2-225ENST00000556798 TRIM61Q5EBN2 209 aa17.58■□□□□ 0.4
SHMT2-225ENST00000556798 DPPA4Q7L190 304 aa17.58■□□□□ 0.4
SHMT2-225ENST00000556798 ALYREFQ86V81 257 aaKnown RBP17.58■□□□□ 0.4
SHMT2-225ENST00000556798 RASGEF1CQ8N431 466 aa17.58■□□□□ 0.4
SHMT2-225ENST00000556798 SPOCK2Q92563 424 aa17.58■□□□□ 0.4
SHMT2-225ENST00000556798 TADA1Q96BN2 335 aa17.58■□□□□ 0.4
SHMT2-225ENST00000556798 OXNAD1Q96HP4 312 aaPredicted RBP17.58■□□□□ 0.4
SHMT2-225ENST00000556798 SERAC1Q96JX3 654 aa17.58■□□□□ 0.4
SHMT2-225ENST00000556798 FCRL5Q96RD9 977 aa17.58■□□□□ 0.4
SHMT2-225ENST00000556798 NAPGQ99747 312 aaPredicted RBP17.58■□□□□ 0.4
SHMT2-225ENST00000556798 FRMD8P1Q9BZ68 369 aaPredicted RBP17.58■□□□□ 0.4
SHMT2-225ENST00000556798 GBA3Q9H227 469 aa17.58■□□□□ 0.4
SHMT2-225ENST00000556798 TM9SF3Q9HD45 589 aa17.58■□□□□ 0.4
SHMT2-225ENST00000556798 VPS45Q9NRW7 570 aa17.58■□□□□ 0.4
SHMT2-225ENST00000556798 COQ6Q9Y2Z9 468 aa17.58■□□□□ 0.4
SHMT2-225ENST00000556798 SCN8AQ9UQD0 1980 aa17.58■□□□□ 0.4
SHMT2-225ENST00000556798 A0A0U1RQS6 177 aa17.57■□□□□ 0.4
SHMT2-225ENST00000556798 A0A1B0GTW7 788 aa17.57■□□□□ 0.4
SHMT2-225ENST00000556798 A0A1W2PQ67 120 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms