RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 FBXO36Q8NEA4 188 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 PPP1R14CQ8TAE6 165 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 SREK1Q8WXA9 508 aaKnown RBP4.52□□□□□ -1.69
ATXN3-241ENST00000556374 PRCCQ92733 491 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-241ENST00000556374 TTC17Q96AE7 1141 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 THOC1Q96FV9 657 aaKnown RBP4.52□□□□□ -1.69
ATXN3-241ENST00000556374 SCLYQ96I15 445 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 MAML3Q96JK9 1138 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 RMDN2Q96LZ7 410 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 NUDCD1Q96RS6 583 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 CYTH2Q99418 400 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 PAFAH2Q99487 392 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 PARK7Q99497 189 aaKnown RBP4.52□□□□□ -1.69
ATXN3-241ENST00000556374 FAM118BQ9BPY3 351 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 TSSK1BQ9BXA7 367 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 GCOM2Q9BZD3 368 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-241ENST00000556374 WWP1Q9H0M0 922 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 PORCNQ9H237 461 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 VCX3BQ9H321 246 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 FAM96AQ9H5X1 160 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 EPHX3Q9H6B9 360 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 ZWILCHQ9H900 591 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 TRIM39Q9HCM9 518 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 SNTG2Q9NY99 539 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 PAK5Q9P286 719 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 FBXO40Q9UH90 709 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 XPO7Q9UIA9 1087 aaKnown RBP4.52□□□□□ -1.69
ATXN3-241ENST00000556374 DNPEPQ9ULA0 475 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 MTO1Q9Y2Z2 717 aaKnown RBP4.52□□□□□ -1.69
ATXN3-241ENST00000556374 COQ6Q9Y2Z9 468 aa4.52□□□□□ -1.69
ATXN3-241ENST00000556374 A0A0B4J269 797 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 A0A1W2PRX2 142 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 TMEM191CA6NGB0 347 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 GOLGA8MH3BSY2 632 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 H7C0C1 242 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 M0QYV0 167 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 PDHXO00330 501 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 COPEO14579 308 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 TNPO2O14787 897 aaKnown RBP4.51□□□□□ -1.69
ATXN3-241ENST00000556374 ALOX15BO15296 676 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 GYG2O15488 501 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 MTSS1O43312 755 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 CST8O60676 142 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 ATP9AO75110 1047 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 TOM1L1O75674 476 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 ZNF189O75820 626 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-241ENST00000556374 ZBED1O96006 694 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 CALCAP01258 141 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 PRKCBP05771 671 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 KRT19P08727 400 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 GSTA2P09210 222 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 ZSCAN5DPP0CG00 497 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 KRT3P12035 628 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 ACADSP16219 412 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 CREB1P16220 341 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 KRT4P19013 534 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 ATP6V1C1P21283 382 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 CALB2P22676 271 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 GLRA2P23416 452 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 IVDP26440 423 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 PTPN4P29074 926 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 RPA3P35244 121 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-241ENST00000556374 PTGS2P35354 604 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 VHLP40337 213 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 CDKN2BP42772 138 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 ATP5OP48047 213 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 SARNPP82979 210 aaKnown RBP4.51□□□□□ -1.69
ATXN3-241ENST00000556374 TFAMQ00059 246 aaKnown RBP4.51□□□□□ -1.69
ATXN3-241ENST00000556374 CDK16Q00536 496 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 OTUD4Q01804 1114 aaKnown RBP4.51□□□□□ -1.69
ATXN3-241ENST00000556374 NHLH1Q02575 133 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 TNFAIP2Q03169 654 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 KLC1Q07866 573 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 PPIL2Q13356 520 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 MXD4Q14582 209 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-241ENST00000556374 ACAP1Q15027 740 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 SHHQ15465 462 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 OASLQ15646 514 aaKnown RBP4.51□□□□□ -1.69
ATXN3-241ENST00000556374 MAPK6Q16659 721 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 C2CD6Q53TS8 623 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 C2orf27AQ580R0 203 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 CMPK2Q5EBM0 449 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 ZNF667Q5HYK9 610 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 TLDC1Q6P9B6 456 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 BBS12Q6ZW61 710 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 APBB1IPQ7Z5R6 666 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-241ENST00000556374 ANKS1BQ7Z6G8 1248 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 ANKRD23Q86SG2 305 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 MRGPRGQ86SM5 289 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 FAM228AQ86W67 206 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 CHSY1Q86X52 802 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 ERO1BQ86YB8 467 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 LDLRAD3Q86YD5 345 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 CCDC60Q8IWA6 550 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-241ENST00000556374 CTAGE3PQ8IX95 158 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.51□□□□□ -1.69
ATXN3-241ENST00000556374 SCYL3Q8IZE3 742 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 MAB21L3Q8N8X9 362 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 OR14K1Q8NGZ2 314 aa4.51□□□□□ -1.69
ATXN3-241ENST00000556374 RAB3IL1Q8TBN0 382 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms