RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 UGP2Q16851 508 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 INAVAQ3KP66 663 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 TMEM52BQ4KMG9 183 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 N4BP2L1Q5TBK1 243 aaPredicted RBP11.63□□□□□ -0.55
SLIRP-205ENST00000556310 SLC9A4Q6AI14 798 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 ERAP2Q6P179 960 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 RAD9BQ6WBX8 426 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 DBX2Q6ZNG2 339 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 ZSWIM9Q86XI8 627 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 SPATS2Q86XZ4 545 aaKnown RBP11.63□□□□□ -0.55
SLIRP-205ENST00000556310 PGBD5Q8N414 524 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 TEX26Q8N6G2 289 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 PLD5Q8N7P1 536 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 OR13H1Q8NG92 308 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.63□□□□□ -0.55
SLIRP-205ENST00000556310 CXorf40AQ8TE69 158 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 MAML1Q92585 1016 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 HDAC11Q96DB2 347 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 KLHDC7BQ96G42 594 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 CALR3Q96L12 384 aaKnown RBP11.63□□□□□ -0.55
SLIRP-205ENST00000556310 ZNF830Q96NB3 372 aaPredicted RBP11.63□□□□□ -0.55
SLIRP-205ENST00000556310 TSGA13Q96PP4 275 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 LENG8Q96PV6 779 aaPredicted RBP11.63□□□□□ -0.55
SLIRP-205ENST00000556310 BAG1Q99933 345 aaPredicted RBP11.63□□□□□ -0.55
SLIRP-205ENST00000556310 C1QTNF7Q9BXJ2 289 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 PCDH12Q9NPG4 1184 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 GPR27Q9NS67 375 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 DTLQ9NZJ0 730 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 PCOLCE2Q9UKZ9 415 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 TFR2Q9UP52 801 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 ATP8A1Q9Y2Q0 1164 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 HYOU1Q9Y4L1 999 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 HS3ST3A1Q9Y663 406 aa11.63□□□□□ -0.55
SLIRP-205ENST00000556310 A0A1W2PQ67 120 aa11.62□□□□□ -0.55
SLIRP-205ENST00000556310 BTNL10A8MVZ5 291 aa11.62□□□□□ -0.55
SLIRP-205ENST00000556310 GOLGA6L6A8MZA4 724 aa11.62□□□□□ -0.55
SLIRP-205ENST00000556310 TRAFD1O14545 582 aaPredicted RBP11.62□□□□□ -0.55
SLIRP-205ENST00000556310 APOL1O14791 398 aa11.62□□□□□ -0.55
SLIRP-205ENST00000556310 MATN3O15232 486 aa11.62□□□□□ -0.55
SLIRP-205ENST00000556310 RAD51BO15315 384 aa11.62□□□□□ -0.55
SLIRP-205ENST00000556310 HTRA2O43464 458 aaPredicted RBP11.62□□□□□ -0.55
SLIRP-205ENST00000556310 TM7SF2O76062 418 aa11.62□□□□□ -0.55
SLIRP-205ENST00000556310 MAP3K6O95382 1288 aa11.62□□□□□ -0.55
SLIRP-205ENST00000556310 PAK4O96013 591 aaPredicted RBP11.62□□□□□ -0.55
SLIRP-205ENST00000556310 CCNCP24863 283 aa11.62□□□□□ -0.55
SLIRP-205ENST00000556310 PMLP29590 882 aa11.62□□□□□ -0.55
SLIRP-205ENST00000556310 GRK6P43250 576 aa11.62□□□□□ -0.55
SLIRP-205ENST00000556310 RXRGP48443 463 aa11.62□□□□□ -0.55
SLIRP-205ENST00000556310 CLDN2P57739 230 aa11.62□□□□□ -0.55
SLIRP-205ENST00000556310 MAXP61244 160 aa11.62□□□□□ -0.55
SLIRP-205ENST00000556310 SIM1P81133 766 aaPredicted RBP11.62□□□□□ -0.55
SLIRP-205ENST00000556310 IL9RQ01113 521 aa11.62□□□□□ -0.55
SLIRP-205ENST00000556310 SHBQ15464 509 aa11.62□□□□□ -0.55
SLIRP-205ENST00000556310 ODF2Q5BJF6 829 aa11.62□□□□□ -0.55
SLIRP-205ENST00000556310 ALG1LQ6GMV1 187 aa11.62□□□□□ -0.55
SLIRP-205ENST00000556310 PTAR1Q7Z6K3 402 aaPredicted RBP11.62□□□□□ -0.55
SLIRP-205ENST00000556310 DCP2Q8IU60 420 aaKnown RBP11.62□□□□□ -0.55
SLIRP-205ENST00000556310 TMEM139Q8IV31 216 aa11.62□□□□□ -0.55
SLIRP-205ENST00000556310 PAF1Q8N7H5 531 aa11.62□□□□□ -0.55
SLIRP-205ENST00000556310 BAHD1Q8TBE0 780 aaPredicted RBP11.62□□□□□ -0.55
SLIRP-205ENST00000556310 SETD7Q8WTS6 366 aaKnown RBP11.62□□□□□ -0.55
SLIRP-205ENST00000556310 NSMCE3Q96MG7 304 aa11.62□□□□□ -0.55
SLIRP-205ENST00000556310 CAMK1GQ96NX5 476 aa11.62□□□□□ -0.55
SLIRP-205ENST00000556310 KLF6Q99612 283 aaPredicted RBP11.62□□□□□ -0.55
SLIRP-205ENST00000556310 WRAP53Q9BUR4 548 aaKnown RBP11.62□□□□□ -0.55
SLIRP-205ENST00000556310 GOLPH3Q9H4A6 298 aa11.62□□□□□ -0.55
SLIRP-205ENST00000556310 NT5MQ9NPB1 228 aa11.62□□□□□ -0.55
SLIRP-205ENST00000556310 HAUS2Q9NVX0 235 aa11.62□□□□□ -0.55
SLIRP-205ENST00000556310 AMACRQ9UHK6 382 aa11.62□□□□□ -0.55
SLIRP-205ENST00000556310 REXO2Q9Y3B8 237 aaKnown RBP11.62□□□□□ -0.55
SLIRP-205ENST00000556310 ALG6Q9Y672 507 aa11.62□□□□□ -0.55
SLIRP-205ENST00000556310 TDRD6O60522 2096 aaKnown RBP11.61□□□□□ -0.55
SLIRP-205ENST00000556310 SPAARA0A1B0GVQ0 90 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 CFAP69A5D8W1 941 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 POM121BA6NF01 834 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 FPGTO14772 594 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 MMP20O60882 483 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 CPP00450 1065 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 C6P13671 934 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 TNNT1P13805 278 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 ZFXP17010 805 aaPredicted RBP11.61□□□□□ -0.55
SLIRP-205ENST00000556310 ITIH2P19823 946 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 RABIFP47224 123 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 VAV2P52735 878 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 POLR2LP62875 67 aaKnown RBP11.61□□□□□ -0.55
SLIRP-205ENST00000556310 FAM193AP78312 1265 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 PPIDQ08752 370 aaKnown RBP11.61□□□□□ -0.55
SLIRP-205ENST00000556310 SLC10A2Q12908 348 aaPredicted RBP11.61□□□□□ -0.55
SLIRP-205ENST00000556310 TRIP6Q15654 476 aaKnown RBP11.61□□□□□ -0.55
SLIRP-205ENST00000556310 TAZQ16635 292 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 PRAMEF14Q5SWL7 426 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 MFSD7Q6UXD7 560 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 GLRX5Q86SX6 157 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 CCDC13Q8IYE1 715 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 KATNAL2Q8IYT4 538 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 SLC22A18ASQ8N1D0 253 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 SPC24Q8NBT2 197 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 ACRBPQ8NEB7 543 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 TPCN2Q8NHX9 752 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 SAP25Q8TEE9 199 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms